Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12- 02] 411 sequences; 26,537,341 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq365 116 2e-21 seq64 104 2e-17 seq124 91.5 1e-13 >seq365 Length=144107 Score = 116 bits (128), Expect = 2e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || ||| ||||||||||| |||||||| ||| | || |||| ||| Sbjct 47816 ACCAAGTGCAGCGTCGATTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGCCCATCCTCC 47875 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 || || || || ||||| || || || ||||||||| |||| | ||||||||||| Sbjct 47876 AGTTGCTTGCCTGCAAAGATCAGACGCTGCTGGTCTGGCGGGATACCCTCCTTGTCTTGG 47935 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| || || | |||| || | ||| || || | || || || || Sbjct 47936 ATCTTTGACTTCACATTGTCAATCGTGTCTGACGACTCCACCTCCAACGTAATCGTCTTG 47995 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 |||||||| |||||||||||||||||||| Sbjct 47996 CCCGTGAGCGTCTTCACAAAGATCTGCAT 48024 Score = 105 bits (116), Expect = 4e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||||||||| | ||| | || |||||||| || || ||||| Sbjct 47606 TCCTTCTGGATGTTGTAGTCCGAAAGTGTGCGTCCGTCCTCCAGCTGCTTGCCAGCAAAG 47665 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||||||| |||| | ||||||||||| |||||| ||||| Sbjct 47666 ATCAGCCGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTG 47725 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || || ||| || || | || || || ||||| || | ||||| || Sbjct 47726 TCAATCGTATCCGAGGACTCCACCTCAAGCGTAATCGTCTTTCCTGTCAACGTCTTGACG 47785 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 47786 AAGATCTGCAT 47796 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||| ||||| ||||| | || |||| || ||||| || || || || Sbjct 48062 TCCTTCTGAATGTTGTAGTCGGAAAGCGTCCGCCCATCCTCAAGCTGCTTGCCAGCGAAA 48121 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||| || | || | ||||| ||||| |||||| |||||| Sbjct 48122 ATGAGACGCTGCTGATCGGGGGGAATGCCCTCTTTGTCCTGAATCTTGCTCTTGACGTTG 48181 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | ||| || || | || || || || ||||| |||||||| ||| Sbjct 48182 TCGATCGTGTCCGACGACTCGACCTCAAGAGTGATCGTCTTGCCCGTCAGAGTCTTGACA 48241 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 48242 AAGATCTGCATA 48253 >seq64 Length=19946 Score = 104 bits (114), Expect = 2e-17 Identities = 152/213 (71%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||||| || || || ||||| ||||| || || | || |||| ||| Sbjct 14271 ACCAGGTGGAGCGTGCTCTCCTTTTGGATGTTGTAGTCAGAGAGAGTCCGACCATCCTCC 14330 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| ||||| || || || || || |||||||| | || | ||||| ||||| | Sbjct 14331 AGCTGCTTTCCCGCGAAAATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCTTTGTCCTGA 14390 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATT----CACCGGCCTCAACATCGACGGTTATGGT 34948 ||||| ||||| || | |||||| | | | ||| || || | ||| ||||| Sbjct 14391 ATCTTGGACTTGAC--AT--TGTCGATTGTGTCGCTGCTCTCGACCTCAAGGGTGATGGT 14446 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || ||||| || |||||||| ||||||||||| Sbjct 14447 CTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 14479 >seq124 Length=325275 Score = 91.5 bits (100), Expect = 1e-13 Identities = 130/183 (71%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| |||||||| ||| | || | || || ||||| || || ||||| Sbjct 289434 TCCTTCTGGATGTTGTAGTCCGACAGGGTCCGGCCGTCCTCGAGCTGCTTGCCAGCAAAA 289493 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| |||| | ||||||||||| ||||| ||||| Sbjct 289494 ATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTG 289553 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || || ||| || || | ||| ||||| || ||||| || |||||||| Sbjct 289554 TCGATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTTGCCCGTAAGGGTCTTCACG 289613 Query 34971 AAG 34973 ||| Sbjct 289614 AAG 289616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324631973890008