Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12- 02] 411 sequences; 26,537,341 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq401 300 3e-76 seq222 105 1e-17 >seq401 Length=585928 Score = 300 bits (332), Expect = 3e-76 Identities = 1020/1577 (65%), Gaps = 58/1577 (4%) Strand=Plus/Plus Query 221065 CATCTCGTCCGTCCATAGACCCCTCTCTTCCAGCACCTTGACCATGTGCTTGTTCACCAC 221124 ||| | ||||| ||| |||||| | || | || |||| | || | ||| ||||| Sbjct 360448 CATGTTGTCCGACCACAGACCCATGTCAACGAGATCCTTCAGCAGCCACGGGTTGACCAC 360507 Query 221125 TTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGGTTCGATGCT 221184 ||||| || |||| ||||| | | | ||| | ||| || ||| |||| |||| || Sbjct 360508 CTGGAACTCGCCCGCCAGCACACGGCGCGAGTAGATGTTGGACGTGTACGGCTCGAAGCA 360567 Query 221185 CTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCACCAGCAGACT 221244 ||||||||||||||| ||||| | ||| || || |||||||| |||||||||||||| Sbjct 360568 CTCGTTGTTGCCCAGAATCTGCGACGTCGACGCTGTCGGCATGGGGGCCACCAGCAGACT 360627 Query 221245 GTTGCGCAGTCCGAATCTATTGATGGACTTTCTCAGCGTGTTCCAGTCACAGTGTCCTCC 221304 |||||||| ||| || || | | ||||| || |||||| || Sbjct 360628 GTTGCGCACGCCGTGCTCCTTAATCTTCAGACGCAGCGAGTCCCAGTCCCA--------- 360678 Query 221305 CAGGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGACACCGGACT 221364 |||||| | |||||| ||| Sbjct 360679 CAGGTCAGACGGCTTCACGTCCCACATGTCGGGTTGCAGAATGCCCTGAGACACGGGAGA 360738 Query 221365 CCCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGTCAGGGC 221424 || ||||||| | ||||| || | | | |||| | |||| ||| |||||| || Sbjct 360739 GCCCTCGTACGTCGAGTAGGTGCCCTCGATCTTGGCCAGATCGCACGACGCCGTCAGAGC 360798 Query 221425 AGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGG-CCTCGGGAGAAGTGA 221483 |||||||| |||||||||||||| ||||||||| ||| || ||||||| || || Sbjct 360799 GGCGTGGTAAATGGTCTCAAAGATTTGCTTGTTGAG-CTCACGGGCCTCGGGCGACTCGA 360857 Query 221484 AGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCC 221543 ||||||| ||||| | ||| | || ||||||||||| || || | |||||| |||| Sbjct 360858 AGGGCATGCGCAGAGCCAAGAAGGCATCCGCCAGTCCCTGCACACCCAGACCGATAGGCC 360917 Query 221544 TGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGAT 221603 || | | ||||| || || ||||| || || |||||||||| || | | Sbjct 360918 GATGGCGCATGTTGCTGTTCTTGGCCTCCGGCACAGGGTAGTAGTTGACGTCAATGACGT 360977 Query 221604 TGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCA 221663 ||| ||||| | || | | | |||||| ||||||| |||| | Sbjct 360978 GGTTCAGGTTGCGGACGACCAGCTGTGCAACCTCGTGAAGCTTCT------TGAAGTCGT 361031 Query 221664 ACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTAC 221723 | | | | | ||| || || || |||| ||||| | ||||| ||| | Sbjct 361032 AT--GTCTCGTTGGTGTAG----TCAACGAAAGACGGCAGGGCCAGAGAGGCCAAGTTGC 361085 Query 221724 ACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACT 221783 | || |||||||| || | | |||| | |||||| || || |||||| || Sbjct 361086 AAACAGCCACCTCATCTGGGGCAGAGTACTCCACGATCTCCGTGCACAGGTTGGAGCTGC 361145 Query 221784 TGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCG-TCCTTGTAGAGCATA 221842 |||||| ||||||| || || || |||||| ||| ||| | |||||||||||||| Sbjct 361146 GGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTG-CAGTGGTCCTTGTAGAGCATG 361204 Query 221843 AAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGGCGCTC 221902 || || ||| |||||| ||| || | ||||| || |||||| | ||||| || Sbjct 361205 AACGGGTTGCCCGTCTCCGTCTGGGCTTCGAGAATGGCGTACCAGAGCT-TCTGGGCCTT 361263 Query 221903 -ACCGTCCTCTTGACTGC-ACCCTCGGTCTTTTCATAC--CCGGTATAGAGCATGTCAAA 221958 | |||| | ||| || ||| ||| || ||||| | ||| || || | |||| Sbjct 361264 GATCGTCTTAC-GACCGCGACCTTCGCGCT---CATACTTCTCGTACAGGGCCT--CAAA 361317 Query 221959 CTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAGT- 222017 || || || || || ||| ||| || ||| | ||| |||||||| |||| | Sbjct 361318 CTCGTCGCCATAGCAGTCCGCCATGCCGGGGCACTCGTTGGGGCACATCAGTGTCCAATC 361377 Query 222018 GC--TTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAG 222075 || || || || || | || |||||| || || |||||||| || || | || || Sbjct 361378 GCCATTCTTCTCC---ACACGCTTCATGAACAGATCAGGGATCCAGAGGGCGAGGAACAG 361434 Query 222076 ATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAAT 222135 ||| | || || ||||||| ||| | ||| || | |||||| | ||||||||| | Sbjct 361435 ATCGCGGGCACGGATCTCCTCCTTGCCATGGTTCTTGCGCAGATCGAGAAACTCAAAGAC 361494 Query 222136 GTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTG 222195 || |||||||| ||||| || || | | | ||| ||||| |||||||| || ||||| Sbjct 361495 ATCGGCGTGCCAAGGCTCAAGGTATATGCAGAAAGCACCGGGGCGCTTGTTTCCGCCCTG 361554 Query 222196 ATCCACCATCCTCTCCAGAGC-GTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATC 222254 ||||| || | | | | |||| ||| || || | || | | ||||||||| Sbjct 361555 GTCCAC-ATAGCGTGCCGTGTTGTTGTAGACACGGAGCATAGGGATGATGCCGTTGGATG 361613 Query 222255 GACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGACAT----G 222310 ||||| ||||| |||||| | || |||| || | | || ||||| | Sbjct 361614 TGCCGTTTGTGCCGGCAATGTAGGAGCCAGTAGCCC---GGATGC-GGTGGACATTGAGG 361669 Query 222311 CCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCC 222370 || || |||||||| || ||||||||||| ||| ||||||| ||||| ||| ||| Sbjct 361670 CCAATTCCACCGGCCGTCTTGGAGATCATGGCACAGGTCTTGAGGGTGTCGTAGATACCC 361729 Query 222371 TCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAA 222430 || || ||| ||||| | || || || || || || |||||||| | | | || Sbjct 361730 TCGATGCTGTCATCCTTCATGTCCACGAGGAAGCAGGAGGACATCTGGGCCTGTGGGGTG 361789 Query 222431 CAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTAC 222490 | |||||| || |||||||| ||| || || ||| | | ||||| | ||| Sbjct 361790 CCGGCGTTGAAGAGCGTGGGCGAGGCATGCGTGAAGAACTTGTTCGACATGTAGTTGTAT 361849 Query 222491 GTCTCTACGACTCTGGCGATGTTGTC-CCCGTGAATCTGCATGGCGCATCTCATGTACAT 222549 ||||| || || | | | |||||| ||| || | || | | | |||| ||| Sbjct 361850 GTCTCGACAACACGCTCCACGTTGTCACCCCAGATGCCCACTGACAC-GCGCATGATCAT 361908 Query 222550 GTACTGGGGCCTCTCCACA--GGACCCTTGGAGCTGGAGAGCAGGTACGATTTTTCCAGA 222607 || ||| |||| || ||| || | |||| ||||||||| || ||||| Sbjct 361909 GTGCTGTGGCCGTTCGACAATCTTGCCGTTCAGCT--TGAGCAGGTAGGACCGCTCCAGG 361966 Query 222608 GTCTTGAACCCAAAGTA 222624 |||||||| |||||||| Sbjct 361967 GTCTTGAAGCCAAAGTA 361983 >seq222 Length=676535 Score = 105 bits (116), Expect = 1e-17 Identities = 331/513 (65%), Gaps = 13/513 (3%) Strand=Plus/Plus Query 25814 GCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCA-GAGCGCTACGTTT 25872 ||||| || |||||| ||||| ||||||||||| || ||| || | || Sbjct 131610 GCATCCGGAAGAAGGCCGACTGGGCTCTGAAGTGGATCTCGGACCGTGAGTCCTCC-TTC 131668 Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932 | | |||| |||| || || || || || ||||| || || |||||||| | || | Sbjct 131669 GCCCAGCGCTTGGTCGCTTTCGCCGCCGTTGAGGGTATTTTCTTCAGCGGGGCTTTCTCC 131728 Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTC 25992 ||||||||||| | ||| || || ||||| || ||| || || |||||||| Sbjct 131729 TCCATCTTCTGGTTGAAGAAGCGTGGCCTGATGCCTGGCCTGACATTCTCGAACGAGCTT 131788 Query 25993 ATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTG 26052 || | |||||||| || |||| || |||||||||||||||| | || | | Sbjct 131789 ATTTCTCGTGACGAGGGCCTGCACACCGACTTTGCCTGCCTGCTCTTCTCG-----CAT- 131842 Query 26053 CTCCACAAACCTTCT--CAAGAGACCG-TCTACAGTATCATCAAAGAGGCTGTGGAGATC 26109 ||| | || | | |||| | | || | |||||| || ||||| |||| Sbjct 131843 CTCAAGAACCGCCCGAGCAAGCAGCTGATCGAGGATATCATTGTCGATGCTGTCAAGATT 131902 Query 26110 GAGAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTC 26169 ||| ||||||| | | ||||||||| || ||| Sbjct 131903 GAGCAGGAGTTCCTGACCGAGGCGCTTCCCTGCGCTCTTCTCGGCATGAACTCCACCCTC 131962 Query 26170 ATGAGCCAATACATTGAGTATGTGGCCGACCATCTGCTG-TGCCAGCTGGGACTCGCCAG 26228 |||| ||||||||||||| || ||||||| || ||| | | ||| | | | || Sbjct 131963 ATGAAGCAATACATTGAGTTCGTTGCCGACCGCCTACTGGTTGCTCTTGGCAATGACAAG 132022 Query 26229 ACTCTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGAC 26288 | ||| | | | ||||| |||||||| ||||| ||||| || ||| || ||||| Sbjct 132023 G-TGTACCGCTCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGGTGGCAAGAC 132081 Query 26289 CAACTTCTTTGAAAAGAGGGTCGGCGACTATCA 26321 ||||||||| || ||| | ||||| ||||| || Sbjct 132082 CAACTTCTTCGAGAAGCGCGTCGGTGACTACCA 132114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928840028059840