Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12- 02] 411 sequences; 26,537,341 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq365 150 2e-31 seq64 87.8 2e-12 >seq365 Length=144107 Score = 150 bits (166), Expect = 2e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || ||||| || || || || |||||| | || || || | | Sbjct 48024 ATGCAGATCTTTGTGAAGACGCTCACGGGCAAGACGATTACGTTGGAGGTGGAGTCGTCA 47965 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||||||||||||| || || || || || || || Sbjct 47964 GACACGATTGACAATGTGAAGTCAAAGATCCAAGACAAGGAGGGTATCCCGCCAGACCAG 47905 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| |||||||||| || || || ||||||||| | | | | |||| || || ||| Sbjct 47904 CAGCGTCTGATCTTTGCAGGCAAGCAACTGGAGGATGGGCGCACCCTGTCGGACTACAAC 47845 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||||| ||||||||||| || ||||||||| |||| | ||||| ||| Sbjct 47844 ATTCAGAAGGAATCGACGCTGCACTTGGTGCTGCGTCTTCGCGGCGGC 47797 Score = 111 bits (122), Expect = 1e-19 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | |||||||| ||||| || || || || || || || ||| | | Sbjct 48480 ATGCAGATCTTTGTCAAAACGCTTACCGGCAAGACCATCACACTAGAGGTTGAATCGTCG 48421 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| |||| | || || ||||| || |||||||| || || || |||||||| Sbjct 48420 GACACGATAGACAACGTCAAGAGCAAGATTCAGGACAAAGAGGGCATTCCCCCCGATCAG 48361 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA--TTCGAGAAACATGTCAGATTATA 24881 || || | || || || || || ||||| ||||| ||| || | | || ||||| | Sbjct 48360 CAGCGCCTCATTTTCGCTGGCAAGCAGCTCGAGGACGGTCG-GACGC-TATCCGATTACA 48303 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||| || ||||| ||||| || ||| | || |||| |||| || || Sbjct 48302 ACATCCAGAAGGAGTCGACGCTCCACCTCGTCCTGCGTCTGCGTGGTGG 48254 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||| | || || || || |||||||| || || || || | Sbjct 47796 ATGCAGATCTTCGTCAAGACGTTGACAGGAAAGACGATTACGCTTGAGGTGGAGTCCTCG 47737 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||||| ||||| || || || || || || || Sbjct 47736 GATACGATTGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCGCCAGACCAG 47677 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA-TGTCAGATTATAA 24882 || || |||||||||| || || ||||||||||| || ||| | || || || || Sbjct 47676 CAGCGGCTGATCTTTGCTGGCAAGCAGCTGGAGGA-CGGACGCACACTTTCGGACTACAA 47618 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||| || ||||| || || || ||| ||||| |||| |||| || ||| Sbjct 47617 CATCCAGAAGGAGTCAACGCTGCACCTGGTGCTGCGTCTGCGTGGCGGC 47569 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || || || || || || || || || | | Sbjct 48252 ATGCAGATCTTTGTCAAGACTCTGACGGGCAAGACGATCACTCTTGAGGTCGAGTCGTCG 48193 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || |||||||| || || || |||||||| Sbjct 48192 GACACGATCGACAACGTCAAGAGCAAGATTCAGGACAAAGAGGGCATTCCCCCCGATCAG 48133 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | || || || || || ||||| |||||| | | | | || || || ||| Sbjct 48132 CAGCGTCTCATTTTCGCTGGCAAGCAGCTTGAGGATGGGCGGACGCTTTCCGACTACAAC 48073 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||||| ||||| || || || || ||||| | || | || || ||| Sbjct 48072 ATTCAGAAGGAGTCTACGCTGCATCTGGTGCTCCGTCTCCGTGGTGGC 48025 >seq64 Length=19946 Score = 87.8 bits (96), Expect = 2e-12 Identities = 160/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || || || || || || || | Sbjct 14479 ATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGAGCAGC 14420 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || || ||||| || |||||||| || || || || || || Sbjct 14419 GACACAATCGACAATGTCAAGTCCAAGATTCAGGACAAAGAGGGCATCCCCCCTGACCAG 14360 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881 || || |||| || || || || |||||||||||| ||| || | | || || || | Sbjct 14359 CAGCGCCTGATTTTCGCGGGAAAGCAGCTGGAGGATGGTCG-GACTC-TCTCTGACTACA 14302 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932 |||| |||||||| || || ||| ||||| | || | || || |||| Sbjct 14301 ACATCCAAAAGGAGAGCACGCTCCACCTGGTGCTTCGGCTCCGTGGCGGCG 14251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449895288651080