Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12- 02] 411 sequences; 26,537,341 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq365 143 2e-29 seq64 138 7e-28 seq124 116 2e-21 >seq365 Length=144107 Score = 143 bits (158), Expect = 2e-29 Identities = 147/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 |||||||||||||| |||||||| ||| ||||| |||| ||||||||||| || || ||| Sbjct 47834 TCCTTCTGAATGTTGTAGTCCGACAGGGTGCGCCCATCCTCCAGTTGCTTGCCTGCAAAG 47893 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 ||||| || ||||||||| |||| | ||||||||||| | || ||| || || Sbjct 47894 ATCAGACGCTGCTGGTCTGGCGGGATACCCTCCTTGTCTTGGATCTTTGACTTCACATTG 47953 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | |||| || | ||| || || | || || ||||| |||||||| ||||| ||| Sbjct 47954 TCAATCGTGTCTGACGACTCCACCTCCAACGTAATCGTCTTGCCCGTGAGCGTCTTCACA 48013 Query 34967 AAGATCTGCATG 34978 |||||||||||| Sbjct 48014 AAGATCTGCATG 48025 Score = 125 bits (138), Expect = 5e-24 Identities = 156/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| |||||||| | || ||||||||| ||||| |||||||| || |||| | || Sbjct 47584 CAGCACCAGGTGCAGCGTTGACTCCTTCTGGATGTTGTAGTCCGAAAGTGTGCGTCCGTC 47643 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| ||||| || || |||||||| || ||||||||| |||| | ||||||||||| Sbjct 47644 CTCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCTGGCGGGATGCCCTCCTTGTC 47703 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || ||||| | |||| || || ||| || |||| || || || Sbjct 47704 CTGGATCTTCGACTTGACATTGTCAATCGTATCCGAGGACTCCACCTCAAGCGTAATCGT 47763 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||||| || | ||||| || |||||||||||| Sbjct 47764 CTTTCCTGTCAACGTCTTGACGAAGATCTGCATG 47797 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||||||||| ||||| || || | ||| |||| || || ||||| || ||||| Sbjct 48061 CTCCTTCTGAATGTTGTAGTCGGAAAGCGTCCGCCCATCCTCAAGCTGCTTGCCAGCGAA 48120 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 || || || ||||| || | || | ||||| ||||| | || || |||||| Sbjct 48121 AATGAGACGCTGCTGATCGGGGGGAATGCCCTCTTTGTCCTGAATCTTGCTCTTGACGTT 48180 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||| || | |||||| |||| || || ||||| ||||| || ||||| || Sbjct 48181 GTCGATCGTGTCCGACGACTCGACCTCAAGAGTGATCGTCTTGCCCGTCAGAGTCTTGAC 48240 Query 34966 AAAGATCTGCAT 34977 |||||||||||| Sbjct 48241 AAAGATCTGCAT 48252 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 |||||| ||||| | || ||||||||| ||||| || || ||||| | || | || Sbjct 48268 CAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGATAGCGTCCGACCGTC 48327 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| || ||||| || || || ||||| || | || | ||||| ||||| Sbjct 48328 CTCGAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGATCGGGGGGAATGCCCTCTTTGTC 48387 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || |||||| |||||| || | || || || | || ||||| Sbjct 48388 CTGAATCTTGCTCTTGACGTTGTCTATCGTGTCCGACGATTCAACCTCTAGTGTGATGGT 48447 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 ||| || || || || || ||||||||||||||||| Sbjct 48448 CTTGCCGGTAAGCGTTTTGACAAAGATCTGCATGAT 48483 >seq64 Length=19946 Score = 138 bits (152), Expect = 7e-28 Identities = 162/217 (75%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| | ||||||||||| || ||||| ||||| || || | || |||| Sbjct 14268 AGCACCAGGTGGAGCGTGCTCTCCTTTTGGATGTTGTAGTCAGAGAGAGTCCGACCATCC 14327 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| |||||||| ||||| ||||| || |||||||| | || | ||||| ||||| Sbjct 14328 TCCAGCTGCTTTCCCGCGAAAATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCTTTGTCC 14387 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || ||||| || | ||||| || || |||||| |||| ||| || Sbjct 14388 TGAATCTTGGACTTGAC--AT--TGTCGATTGTGTCGCTGCTCTCGACCTCAAGGGTGAT 14443 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||||| ||||| |||||||| || |||||||||||| Sbjct 14444 GGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATG 14480 >seq124 Length=325275 Score = 116 bits (128), Expect = 2e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| | ||| ||||||||| ||||| |||||||| ||| | || | || Sbjct 289413 AGCACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGACAGGGTCCGGCCGTCC 289472 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || || || ||||| || |||||||| |||| | ||||||||||| Sbjct 289473 TCGAGCTGCTTGCCAGCAAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCC 289532 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || ||||| | |||| || || |||||| || | ||| |||||| Sbjct 289533 TGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTC 289592 Query 34946 TTTCCCGTGAGGGTCTTTACAAAG 34969 || ||||| |||||||| || ||| Sbjct 289593 TTGCCCGTAAGGGTCTTCACGAAG 289616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325691168584409