Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12-
02] 411 sequences; 26,537,341 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq365 86.0 5e-12
>seq365
Length=144107
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| || || ||||| || || ||||| || || ||||| | || |||| |
Sbjct 47796 ATGCAGATCTTCGTCAAGACGTTGACAGGAAAGACGATTACGCTTGAGGTGGAGTCCTCG 47737
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
||||| | | | | || || ||||| || || || ||| | || || |||
Sbjct 47736 GATACGATTGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCGCCAGACCAG 47677
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||| | || || | ||| || || ||||||||||||| ||| | |||||||||||
Sbjct 47676 CAGCGGCTGATCTTTGCTGGCAAGCAGCTGGAGGACGGACGCACACTTTCGGACTACAAC 47617
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
|| || |||||||| ||| ||||| ||||| || | |||| || ||
Sbjct 47616 ATCCAGAAGGAGTCAACGCTGCACCTGGTGCTGCGTCTGCGTGGCGG 47570
Score = 82.4 bits (90), Expect = 6e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| || |||||||| ||| | || ||||| || || || | || ||| |
Sbjct 48252 ATGCAGATCTTTGTCAAGACTCTGACGGGCAAGACGATCACTCTTGAGGTCGAGTCGTCG 48193
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|| || ||| | | || || |||||| || ||||| ||| | ||| ||||||
Sbjct 48192 GACACGATCGACAACGTCAAGAGCAAGATTCAGGACAAAGAGGGCATTCCCCCCGATCAG 48133
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||| | || |||| || || || ||||| ||||| | || | | |||||||||
Sbjct 48132 CAGCGTCTCATTTTCGCTGGCAAGCAGCTTGAGGATGGGCGGACGCTTTCCGACTACAAC 48073
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765
||||| |||||||||||| |||| |||||
Sbjct 48072 ATTCAGAAGGAGTCTACGCTGCATCTGGTG 48043
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398874802001179
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |