Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12- 02] 411 sequences; 26,537,341 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq365 147 4e-30 >seq365 Length=144107 Score = 147 bits (162), Expect = 4e-30 Identities = 162/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 |||||| || |||||||| || ||||| ||||| || || || || || || | | || Sbjct 47809 ACGCAGCACCAAGTGCAGCGTCGATTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGCCC 47868 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || ||||| || || |||||||| || | || || ||||| || || || ||||| Sbjct 47869 ATCCTCCAGTTGCTTGCCTGCAAAGATCAGACGCTGCTGGTCTGGCGGGATACCCTCCTT 47928 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 ||||| ||||||| || ||||| |||||||| || | || || ||||| || || Sbjct 47929 GTCTTGGATCTTTGACTTCACATTGTCAATCGTGTCTGACGACTCCACCTCCAACGTAAT 47988 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||||||| || | |||||| ||||| |||||||| Sbjct 47989 CGTCTTGCCCGTGAGCGTCTTCACAAAGATCTGCAT 48024 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || | || |||||| || | |||||| || || || ||||| || || || || || Sbjct 47570 CCGCCACGCAGACGCAGCACCAGGTGCAGCGTTGACTCCTTCTGGATGTTGTAGTCCGAA 47629 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | ||||| || || || || ||||||||||| || | || || ||||| || Sbjct 47630 AGTGTGCGTCCGTCCTCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCTGGCGGG 47689 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || || ||||| || || ||||| | || ||||| ||||||||||| | || || Sbjct 47690 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCAATCGTATCCGAGGACTCCACC 47749 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | || |||||||| |||||||||||||| || || |||||||| Sbjct 47750 TCAAGCGTAATCGTCTTTCCTGTCAACGTCTTGACGAAGATCTGCAT 47796 Score = 100 bits (110), Expect = 6e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || | ||||| ||||| || ||||| || || || || || || | | || Sbjct 48037 ACGGAGCACCAGATGCAGCGTAGACTCCTTCTGAATGTTGTAGTCGGAAAGCGTCCGCCC 48096 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || || || || ||||| || || || | || ||||| || || || || || || Sbjct 48097 ATCCTCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATGCCCTCTTT 48156 Query 82715 ATCTTGAATCTTTGCTTTT-ACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTA 82773 || |||||||| ||| || || || || ||||| || | || || || | ||| | Sbjct 48157 GTCCTGAATCTT-GCTCTTGACGTTGTCGATCGTGTCCGACGACTCGACCTCAAGAGTGA 48215 Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||||| |||| ||||| ||||| |||||||| Sbjct 48216 TCGTCTTGCCCGTCAGAGTCTTGACAAAGATCTGCAT 48252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981822029759329