Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12- 02] 411 sequences; 26,537,341 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq401 118 3e-21 seq222 102 3e-16 >seq401 Length=585928 Score = 118 bits (130), Expect = 3e-21 Identities = 368/551 (67%), Gaps = 34/551 (6%) Strand=Plus/Minus Query 254971 CGGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGG 255030 |||||| || || ||| ||||||| | ||||||| ||| ||||| || || || || || Sbjct 361606 CGGCATCATCCCTATGCTCCGTGTCTACAACAACACGGCACGCTATGTGGACCAGGGCGG 361547 Query 255031 CGGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGA---CATTGA 255087 ||| ||||| || || ||| ||| ||||| ||||| ||||||||||| | |||| Sbjct 361546 AAACAAGCGCCCCGGTGCTTTCTGCATATACCTTGAGCCTTGGCACGCCGATGTCTTTGA 361487 Query 255088 ACGGTTTTTACTGCTGTCCGACAAGACC---GGCACCGAGGAGCTGATCGCCCGCGACAT 255144 |||| | | | | || ||||| | |||| |||||| | |||||||| | Sbjct 361486 ---GTTTCT--CGATCTGCG-CAAGAACCATGGCAAGGAGGAGATCCGTGCCCGCGATCT 361433 Query 255145 CTACACCGCTGTCTGGTGCTGCGATCTGTTTATGCGACGCGTGGA-ACGAGACGAGACCT 255203 | | ||| ||||| | |||||||| ||| || ||||| | || | || | Sbjct 361432 GTTCCTCGCCCTCTGGATCCCTGATCTGTTCATGAAGCGTGTGGAGAAGAATGGCGA-TT 361374 Query 255204 GGAGCCTCATGTGTCCCAACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTTTG 255263 ||| || ||||| |||||| | ||||| | | |||| | || |||||||||| Sbjct 361373 GGACACTGATGTGCCCCAACGAGTGCCCCGGCATGGCGGACTGCTATGGCGACGAGTTTG 361314 Query 255264 AAAAACTGTATCTGGAGTACGAGCGTGCCGGCCG-GTTCGTACG----CCAAGTGCCCGC 255318 | ||||| | |||| ||||| | || || | ||||| | |||| |||| Sbjct 361313 AGGCCCTGTACGAGAAGTATGAGCGCGAAGGTCGCGGTCGTAAGACGATCAAG-GCCC-- 361257 Query 255319 GAAGAAGATCTGGAACACGATGGTGCGCA-TGCAGCTGGAAACCGGAATGCCGTTCCTAT 255377 ||||| ||||| || | || | || | ||| ||| || || | |||||| | Sbjct 361256 --AGAAGCTCTGGTACGCCATTCT-CGAAGCCCAGACGGAGACGGGCAACCCGTTCATGC 361200 Query 255378 TGCACAAAGACCAC-ATAAACGCACGGTCGAACCAACGCCACCGCGGTACGATACGCGGC 255436 | |||| |||||| || |||| | | ||||| ||| || || || ||| || Sbjct 361199 TCTACAAGGACCACTGCAACCGCAAGAGC-AACCAGAAGAACCTGGGCACCATCCGCAGC 361141 Query 255437 TCGAACCTGTGCACCGAGATTACGTTGCACACGTCAGCGC---AAGAGGTGGCCGTTTGC 255493 || ||||||||||| ||||| ||| | || || || | | |||||||| |||||| Sbjct 361140 TCCAACCTGTGCACGGAGAT--CGTGGAGTAC-TCTGCCCCAGATGAGGTGGCTGTTTGC 361084 Query 255494 AACTTGGCGTC 255504 |||||||| || Sbjct 361083 AACTTGGCCTC 361073 >seq222 Length=676535 Score = 102 bits (112), Expect = 3e-16 Identities = 126/171 (74%), Gaps = 1/171 (1%) Strand=Plus/Plus Query 443699 CTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTT 443758 ||||| | |||| | |||||||| || | || || || | || || ||||| |||| Sbjct 131665 CTTCGCCCAGCGCTTGGTCGCTTTCGCCGCCGTTGAGGGTATTTTCTTCAGCGGG-GCTT 131723 Query 443759 TAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACG 443818 | ||||||||||||||||||| |||||||| || |||| || ||||| || |||| Sbjct 131724 TCTCCTCCATCTTCTGGTTGAAGAAGCGTGGCCTGATGCCTGGCCTGACATTCTCGAACG 131783 Query 443819 AACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCT 443869 | || || ||| |||||||| |||| |||||| ||||| || |||| Sbjct 131784 AGCTTATTTCTCGTGACGAGGGCCTGCACACCGACTTTGCCTGCCTGCTCT 131834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588327635921895