Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12-
02] 411 sequences; 26,537,341 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq401 118 3e-21
seq222 102 3e-16
>seq401
Length=585928
Score = 118 bits (130), Expect = 3e-21
Identities = 368/551 (67%), Gaps = 34/551 (6%)
Strand=Plus/Minus
Query 254971 CGGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGG 255030
|||||| || || ||| ||||||| | ||||||| ||| ||||| || || || || ||
Sbjct 361606 CGGCATCATCCCTATGCTCCGTGTCTACAACAACACGGCACGCTATGTGGACCAGGGCGG 361547
Query 255031 CGGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGA---CATTGA 255087
||| ||||| || || ||| ||| ||||| ||||| ||||||||||| | ||||
Sbjct 361546 AAACAAGCGCCCCGGTGCTTTCTGCATATACCTTGAGCCTTGGCACGCCGATGTCTTTGA 361487
Query 255088 ACGGTTTTTACTGCTGTCCGACAAGACC---GGCACCGAGGAGCTGATCGCCCGCGACAT 255144
|||| | | | | || ||||| | |||| |||||| | |||||||| |
Sbjct 361486 ---GTTTCT--CGATCTGCG-CAAGAACCATGGCAAGGAGGAGATCCGTGCCCGCGATCT 361433
Query 255145 CTACACCGCTGTCTGGTGCTGCGATCTGTTTATGCGACGCGTGGA-ACGAGACGAGACCT 255203
| | ||| ||||| | |||||||| ||| || ||||| | || | || |
Sbjct 361432 GTTCCTCGCCCTCTGGATCCCTGATCTGTTCATGAAGCGTGTGGAGAAGAATGGCGA-TT 361374
Query 255204 GGAGCCTCATGTGTCCCAACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTTTG 255263
||| || ||||| |||||| | ||||| | | |||| | || ||||||||||
Sbjct 361373 GGACACTGATGTGCCCCAACGAGTGCCCCGGCATGGCGGACTGCTATGGCGACGAGTTTG 361314
Query 255264 AAAAACTGTATCTGGAGTACGAGCGTGCCGGCCG-GTTCGTACG----CCAAGTGCCCGC 255318
| ||||| | |||| ||||| | || || | ||||| | |||| ||||
Sbjct 361313 AGGCCCTGTACGAGAAGTATGAGCGCGAAGGTCGCGGTCGTAAGACGATCAAG-GCCC-- 361257
Query 255319 GAAGAAGATCTGGAACACGATGGTGCGCA-TGCAGCTGGAAACCGGAATGCCGTTCCTAT 255377
||||| ||||| || | || | || | ||| ||| || || | |||||| |
Sbjct 361256 --AGAAGCTCTGGTACGCCATTCT-CGAAGCCCAGACGGAGACGGGCAACCCGTTCATGC 361200
Query 255378 TGCACAAAGACCAC-ATAAACGCACGGTCGAACCAACGCCACCGCGGTACGATACGCGGC 255436
| |||| |||||| || |||| | | ||||| ||| || || || ||| ||
Sbjct 361199 TCTACAAGGACCACTGCAACCGCAAGAGC-AACCAGAAGAACCTGGGCACCATCCGCAGC 361141
Query 255437 TCGAACCTGTGCACCGAGATTACGTTGCACACGTCAGCGC---AAGAGGTGGCCGTTTGC 255493
|| ||||||||||| ||||| ||| | || || || | | |||||||| ||||||
Sbjct 361140 TCCAACCTGTGCACGGAGAT--CGTGGAGTAC-TCTGCCCCAGATGAGGTGGCTGTTTGC 361084
Query 255494 AACTTGGCGTC 255504
|||||||| ||
Sbjct 361083 AACTTGGCCTC 361073
>seq222
Length=676535
Score = 102 bits (112), Expect = 3e-16
Identities = 126/171 (74%), Gaps = 1/171 (1%)
Strand=Plus/Plus
Query 443699 CTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTT 443758
||||| | |||| | |||||||| || | || || || | || || ||||| ||||
Sbjct 131665 CTTCGCCCAGCGCTTGGTCGCTTTCGCCGCCGTTGAGGGTATTTTCTTCAGCGGG-GCTT 131723
Query 443759 TAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACG 443818
| ||||||||||||||||||| |||||||| || |||| || ||||| || ||||
Sbjct 131724 TCTCCTCCATCTTCTGGTTGAAGAAGCGTGGCCTGATGCCTGGCCTGACATTCTCGAACG 131783
Query 443819 AACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCT 443869
| || || ||| |||||||| |||| |||||| ||||| || ||||
Sbjct 131784 AGCTTATTTCTCGTGACGAGGGCCTGCACACCGACTTTGCCTGCCTGCTCT 131834
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588327635921895
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |