Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12- 02] 411 sequences; 26,537,341 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq401 196 6e-45 seq222 91.5 2e-13 >seq401 Length=585928 Score = 196 bits (216), Expect = 6e-45 Identities = 1190/1868 (64%), Gaps = 81/1868 (4%) Strand=Plus/Plus Query 110324 TCAAGACTGAACTGAATTGGTCGGGCTTTCGCCTTTGATCGGAGATAGTACATCCCGGTC 110383 |||| | ||||||| || || |||| |||| | || || |||||||| || ||| Sbjct 360155 TCAACAGTGAACTGGATGGGCTGGGCGGCGGCCTGCGTGCGCAGGTAGTACATTCCCGTC 360214 Query 110384 TTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTT 110443 ||||| || | ||||| || | ||||| | || |||| ||| || || || Sbjct 360215 TTGAGACCCAGCTTCCAGCCGGCGAAGTGCATGCTCGTGATCTTGCCCATGGTGGG-CTC 360273 Query 110444 TC-CATGAAGAGGTTCAT--ACTTTGACTTTGGTCAATGAA-GCGCCCCCGTTGTGCCGC 110499 | |||| || ||||| ||| |||| |||| || || ||||||| || | || || Sbjct 360274 GCGCATGTGGATGTTCAGCGACTGCGACT--GGTCGATAAATGCGCCCCGGTCG-GCGGC 360330 Query 110500 CATATCAATGACATCCTTCA-TCTTA-ATTTCCCAAACTGTGCGATAGAGATTCTTGATA 110557 ||| | | | || | | | | || ||||| || || |||||| |||||| Sbjct 360331 CATCTGCACAA--TCGTGCGCTGGGAGATCTCCCACACGGTCTTGTAGAGAGCCTTGATG 360388 Query 110558 TCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACCATGAGATCCTTC 110617 || | ||||| | | ||| |||||||| ||||| ||| | | ||| | | |||| Sbjct 360389 TCGGCCGGGATGTTGGGGATGTTCTGGATCGAACCGCCCTCGGCAATGATGCGGTTCTTC 360448 Query 110618 ATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTTGACAATG 110677 || | | ||||| ||||| || | ||| || || | || | |||||| | Sbjct 360449 ATGTTGTCCGACCACAGACCCATGTCAACGAGATCCTTCAGCAGCCACGGGTTGACCACC 360508 Query 110678 ACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCAT 110737 ||||| || || || | | | ||||||||| | ||||| || || ||||| Sbjct 360509 TGGAACTCGCCCGCCAGCACACGGCGCGAGTAGATGTTGGACGTGTACGGCTCGAAGCAC 360568 Query 110738 TCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTG 110797 || || || |||| || || | || || ||||| ||||| || |||| || |||||| Sbjct 360569 TCGTTGTTGCCCAGAATCTGCGACGTCGACGCTGTCGGCATGGGGGCCACCAGCAGACTG 360628 Query 110798 TTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAA-CA-----TCCCAGTCGTA--GT 110849 || || | || | |||||| || ||| ||| || |||||||| | | Sbjct 360629 TTGCGCACGCCGTGCTCCTTAAT------CTTCAGACGCAGCGAGTCCCAGTCCCACAGG 360682 Query 110850 TGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAAC 110909 | || || ||||| | |||||||||| || || | || || ||| ||||||| | Sbjct 360683 TCAGAC-GGCTTCACGT-CCCACATGTCGGGTTGCAGAATGCCCTGAGACACGGGAGAGC 360740 Query 110910 CCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATG 110969 |||| | || |||| || | | | |||| || || |||| ||| | | Sbjct 360741 CCTCGTACGTCGAGTAGGTGCCCTCGATCTTGGCCAGATCGCACGACGCCGTCAGAGCGG 360800 Query 110970 CGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAA-- 111027 |||| || ||||| |||||||| | || | ||| ||| || || || || Sbjct 360801 CGTGGTAAATGGTCTCAAAGATTTGCTTGTTGAGCTCACGGGCCTCGGGCGACTCGAAGG 360860 Query 111028 ---TGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGG 111084 |||| || | || || ||||||| || || || ||||||| ||| ||||| Sbjct 360861 GCATGCGCAGAGCCAAGAAGG-----CATCCGCCAGTCCCTGCACACCCAGACCGATAGG 360915 Query 111085 TCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAAT 111141 | || ||||| || | ||| | | ||| || || || | || |||||| Sbjct 360916 CCGATGGCGCATGTT-GCTGTTCTTG--GCCTCCGGCACAGGGTAGTAGTTGACGTCAAT 360972 Query 111142 GACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAA 111201 ||| |||| || || | || | || || | || ||||| || | | || | Sbjct 360973 GACGTGGTTCAGGTTGCGGACGACCAGCTGTGCAACCTCGTGAAGCTTCTTGAAGTCGTA 361032 Query 111202 AGTG-CGA--GTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAAC 111258 || || || | ||| || | || || ||||| | || ||||| |||||||| Sbjct 361033 TGTCTCGTTGGTGTAGTCAACGAAAGAC---GGCAGGGCCAGAGAGGCCAAGTTGCAAAC 361089 Query 111259 AGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAAT 111318 |||| |||||| | | |||||| | || || || || | |||||| || || Sbjct 361090 AGCCACCTCATCTGGGGCAGAGTACTCCACGATCTCCGTGCACAGGTTGGAGCTGCGGAT 361149 Query 111319 CGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGG 111378 || |||| ||||| ||||| ||||| |||||| ||||||||||||||| | || Sbjct 361150 GGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAACGG 361209 Query 111379 CGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGCTGGTACAA 111437 | |||||||||||||| | || |||||| || | ||| | | || | | || | | Sbjct 361210 GTTGCCCGTCTCCGTCTGGGCTTCGAGAATGGCGTACCAGAGCTTCTGGGCCTTG---AT 361266 Query 111438 TGGCGTTGGCCCG-TCCCTCCGC-CTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACC 111495 | | | | ||| ||| ||| ||| ||||| ||| ||||| |||||||| || | Sbjct 361267 CGTCTTACGACCGCGACCTTCGCGCTCATACTTCTCGTACAGGGCCTCAAACTCGTC-GC 361325 Query 111496 CACCGC-GTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTT 111554 || || ||| | | || || || || || || | || | ||| | ||| | Sbjct 361326 CATAGCAGTCCGCCATGCCGGGGCACTCGTTGGGGCACATCAGTGTCCAATCGCCATTCT 361385 Query 111555 CCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTC-TACAC 111613 ||| || ||||||||||| || || || ||||| |||| || ||||| | ||| Sbjct 361386 TCTCCACACGCTTCATGAACAGATCAGGGATCCAGAGGGCGAGGAACAGATCGCGGGCAC 361445 Query 111614 CGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGC 111673 || ||| || | || ||||| || | || || ||||| | || ||| |||||| Sbjct 361446 GGA-TCTCCTCCTTGCCATGGTTCTTGCGCAGATCGAGAAACTCAAAGACATCGGCGTGC 361504 Query 111674 CATGGCTCAAGATAGACTGC-GATAGATCC------CTT-TCGACGCCCAGCTTGATTTA 111725 || |||||||| || | ||| || || || ||| | ||||| || | | Sbjct 361505 CAAGGCTCAAGGTATA-TGCAGAAAGCACCGGGGCGCTTGTTTCCGCCC----TGGTCCA 361559 Query 111726 CATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCAT 111785 ||||||| || ||| ||| | || || ||||| || || || || | ||| || | Sbjct 361560 CATAGCGTGCCGTGTTGTTGTAGACACGGAGCATAGGGATGATGCCGTTGGATGTGCCGT 361619 Query 111786 TTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCC 111845 |||| || ||| || | | || | | |||| | | ||||| || | Sbjct 361620 TTGTGCCGGCAATGTAGGAGCCAGTAGCCCGGATGCGGTGGACATTGAGGCCAATTCCAC 361679 Query 111846 CAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGT 111905 | ||| ||| ||||| ||||| | | || || | |||||||| | ||| || Sbjct 361680 CGGCCGTCTTGGAGATCATGGCACAGGTCTTGAGGGTGTCGTAGATACCCTCGATGCTGT 361739 Query 111906 CCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT-TGGTGTACCAGCATTG 111964 | ||||| || | | |||||||| ||||||||| || || ||| || || || ||| Sbjct 361740 CATCCTTCATGTCCACGAGGAAGCAGGAGGACATCTG-GGCCTGTGGGGTGCCGGCGTTG 361798 Query 111965 AAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAA 112023 ||||| || || | || || |||| | || | | ||||| | || ||||||||| | Sbjct 361799 AAGAGCGTGGGCGAGGCATGCGTGAAGA-ACTTGTTCGACATGTAGTTGTATGTCTCGAC 361857 Query 112024 GACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083 ||| || | || || || |||||| | || || ||||||| ||||| |||||| Sbjct 361858 AACACGCTCCACGTTGTCACCCCAGATGCCCACTGACACGCGCATGATCATGTGCTGTGG 361917 Query 112084 GGTTTCCATGAGGATGCCATCGAGCCGTTGA--AGATAGCTCTTCTCAAGGGTTTTGAGA 112141 ||| | | |||| | ||| |||| || ||| | ||| ||||| |||| Sbjct 361918 CCGTTCGACAATCTTGCCGTTCAGC--TTGAGCAGGTAGGACCGCTCCAGGGTCTTGAAG 361975 Query 112142 CCAAAGTA 112149 |||||||| Sbjct 361976 CCAAAGTA 361983 >seq222 Length=676535 Score = 91.5 bits (100), Expect = 2e-13 Identities = 118/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717 |||||| || ||| || ||||| || || |||||||| || || ||||| || || Sbjct 131824 GGCAAAGTCGGTGTGCAGGCCCTCGTCACGAGAAATAAGCTCGTTCGAGAATGTCAGGCC 131765 Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 122777 ||||| || || |||||||||||||| | || | | |||| | |||| |||||| || Sbjct 131764 AGGCATCAGGCCACGCTTCTTCAACCAGAAGATGGAGGAGAAAGCCCCGCTGAAGAAAAT 131705 Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAG 122820 |||||| || || || || | | ||| | |||||||||| Sbjct 131704 ACCCTCAACGGCGGCGAAAGCGACCAAGCGCTGGGCGAAGGAG 131662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628028773485600