Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12- 02] 411 sequences; 26,537,341 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq222 98.7 1e-15 seq68 84.2 3e-11 >seq222 Length=676535 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/226 (70%), Gaps = 6/226 (3%) Strand=Plus/Plus Query 94733 CAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATACAAAGT 94789 ||||||| || || | ||||| || || |||||| |||||||| | || ||| Sbjct 131601 CAGTTCCTTGCATCCGGAAGAAGGCCGACTGGGCTCTGAAGTGGATCTCGGACCGTGAGT 131660 Query 94790 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 94849 | ||||| || |||| | |||| || || ||||||||||| |||||| | Sbjct 131661 CC---TCCTTCGCCCAGCGCTTGGTCGCTTTCGCCGCCGTTGAGGGTATTTTCTTCAGCG 131717 Query 94850 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 94909 | | |||| | | || | ||| | |||||||| || || ||||| || || |||| Sbjct 131718 GGGCTTTCTCCTCCATCTTCTGGTTGAAGAAGCGTGGCCTGATGCCTGGCCTGACATTCT 131777 Query 94910 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 | ||||||||||| |||||||||||||| || ||| || ||||| Sbjct 131778 CGAACGAGCTTATTTCTCGTGACGAGGGCCTGCACACCGACTTTGC 131823 >seq68 Length=355481 Score = 84.2 bits (92), Expect = 3e-11 Identities = 156/227 (69%), Gaps = 4/227 (2%) Strand=Plus/Minus Query 9703 GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAG 9762 ||| || ||||| |||||||| |||||||| || || | ||| || |||| || Sbjct 83000 GGCGTCGATCTCGTCAATGAACACGATGCAGGGCGCGTTCTTGCGGGCCGTCGCAAACAG 82941 Query 9763 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG--CGGCGGAA 9820 || || || ||| |||||||| || ||||||||||| ||||| | | | || || Sbjct 82940 GTCGCGCACCCGCGACGCGCCCACGCCCACAAACATCTCGACAAACTCGGACCCGCTGAC 82881 Query 9821 CATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCC 9880 | || ||||| || || || || || |||| ||| || || ||||| ||| Sbjct 82880 GCT--GAAAAAGGGCACGCCCGACTCGCCAGCCGTGGCCTTGGCCAGCAGCGTCTTGCCC 82823 Query 9881 GTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927 || || || || || |||| ||| || || |||||||||||||| Sbjct 82822 GTGCCCGGAGGCCCGGCCAGGATGGCGCCGCGCGGAATCTTGGCGCC 82776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583257803497640