Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12- 02] 411 sequences; 26,537,341 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq401 145 2e-29 seq365 145 2e-29 seq124 84.2 7e-11 >seq401 Length=585928 Score = 145 bits (160), Expect = 2e-29 Identities = 438/672 (65%), Gaps = 12/672 (2%) Strand=Plus/Plus Query 349265 ATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACT 349324 || ||||||||||| || || ||| | || || || || | ||| || || || || || Sbjct 541144 ATTATTGCAAATGACCAGGGCAACCGCACCACACCGTCCTTCGTGGCCTTCACGGACACG 541203 Query 349325 GAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTT 349384 ||||| |||| |||||| | || || || || | || || || | || || || Sbjct 541204 GAGCGGTTGATCGGTGATGCCGCCAAGAACCAGGTCGCCATGAACCCCCAGAACACAGTG 541263 Query 349385 TTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC----AAATCTACACAATCTGA 349440 || || |||||||| || ||||| | |||| | ||| | || || | || Sbjct 541264 TTCGACGCTAAGCGGCTCATTGGCCGCCGTTTCGCCGACGCTGAGGTC----CAGGCCGA 541319 Query 349441 TCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGGT 349500 | || || || || || ||| | ||| | ||| |||| || || ||||| ||||| Sbjct 541320 CATGAAGCACTTCCCCTTCACTATCGTTG-ACAAG--GGTGGCAAGCCCATTATCGAGGT 541376 Query 349501 TGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGT 349560 || | || || || | || || ||| ||||| || || || || ||||| | Sbjct 541377 CGAGTTCAAGGGCGAGAAGAAGCAGTTTACCCCCGAGGAGATCTCCTCCATGGTCCTGAC 541436 Query 349561 TAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTAC 349620 || ||| || | || || | || | |||| || || | | || || || || Sbjct 541437 CAAGATGCGTGAGACGGCCGAGTCTTACCTTGGTGGCACCGTCAACAACGCGGTCATCAC 541496 Query 349621 TGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGC 349680 || || || || || || || | ||||| || || || ||||| || |||||| Sbjct 541497 CGTCCCCGCATACTTCAACGACTCTCAGCGCCAGGCCACGAAGGATGCCGGTCTCATTGC 541556 Query 349681 GGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCT 349740 || | || || || | || || || || |||||||| || || ||||| || || || Sbjct 541557 CGGCCTCAACGTCCTCCGTATCATCAACGAGCCCACTGCCGCTGCCATTGCCTACGGTCT 541616 Query 349741 TGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTT 349800 ||| || | | || || || | || || || ||| | ||||||||||| || Sbjct 541617 TGACAAGAAGGTCGAGGGCGAGCGCAACGTCCTGATCTTCGATCTGGGTGGTGGTACCTT 541676 Query 349801 TGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGA 349860 ||||| || || || || |||| ||||| || || || || || | ||||||||||| Sbjct 541677 CGATGTGTCTCTGCTCACCATTGAGGAGGGTATCTTCGAGGTGAAGTCCACTGCTGGTGA 541736 Query 349861 TACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATT 349920 || || || ||||| || || || || || ||||| || || || || || || || Sbjct 541737 CACTCACCTGGGTGGTGAGGACTTCGACAACCGTCTGGTCAACCACTTCGTCAACGAGTT 541796 Query 349921 TAAGCGTCAAGC 349932 ||||| ||||| Sbjct 541797 CAAGCG-CAAGC 541807 >seq365 Length=144107 Score = 145 bits (160), Expect = 2e-29 Identities = 173/232 (75%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || || || || || ||||| || || || || ||||| Sbjct 48250 CATACCACCACGCAGACGCAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATC 48309 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 |||| || || || || || || || || ||||| || || || || |||||||| || Sbjct 48310 GGATAGCGTCCGACCGTCCTCGAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGATCGGG 48369 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685 ||||| || ||||| |||||||| || ||| || || || || |||| || || | || Sbjct 48370 GGGAATGCCCTCTTTGTCCTGAATCTT-GCTCTTGACGTTGTCTATCGTGTCCGACGATT 48428 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||| || ||||| | ||||| ||||| || ||||| ||||| |||||||| Sbjct 48429 CAACCTCTAGTGTGATGGTCTTGCCGGTAAGCGTTTTGACAAAGATCTGCAT 48480 Score = 116 bits (128), Expect = 1e-20 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || || || || || || ||||| || || || || || || || | ||| || || || Sbjct 47585 AGCACCAGGTGCAGCGTTGACTCCTTCTGGATGTTGTAGTCCGAAAGTGTGCGTCCGTCC 47644 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || ||||||||||| || || ||||| || || || || || || || ||| Sbjct 47645 TCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCC 47704 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || | || ||||| ||||||| ||| || | || || ||||| |||| ||| Sbjct 47705 TGGATCTTCGACTTGACATTGTCAATCGTATCCGAGGACTCCACCTCAAGCGTAATCGTC 47764 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || | || || || || |||||||| Sbjct 47765 TTTCCTGTCAACGTCTTGACGAAGATCTGCAT 47796 >seq124 Length=325275 Score = 84.2 bits (92), Expect = 7e-11 Identities = 151/221 (68%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 140508 ATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 140567 ||||||||||| | | || || || || || || ||||| || || || || || || Sbjct 289395 ATACCACCACGCAGGCGGAGCACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCC 289454 Query 140568 GATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGA 140627 || | || || || || || || || || |||||||| || || || ||||| || || Sbjct 289455 GACAGGGTCCGGCCGTCCTCGAGCTGCTTGCCAGCAAAAATCAGGCGCTGCTGGTCGGGC 289514 Query 140628 GGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCA 140687 || || || || || ||||| || || | || ||||| || |||| || || | || Sbjct 289515 GGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCG 289574 Query 140688 ACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAA 140728 || || | || | ||||| || || || || || || || Sbjct 289575 ACCTCCAAGGTGATGGTCTTGCCCGTAAGGGTCTTCACGAA 289615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515246420765033