Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12- 02] 411 sequences; 26,537,341 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq401 279 6e-70 seq222 102 9e-17 >seq401 Length=585928 Score = 279 bits (308), Expect = 6e-70 Identities = 522/761 (69%), Gaps = 6/761 (1%) Strand=Plus/Minus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252 |||||||||| | |||| ||| |||||| || |||||| ||||| ||| Sbjct 361904 TCATGCGCGTGTCAGTGGGCATCTGGGGTGACAACGTGGAGCGTGTTGTCGAGACATACA 361845 Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312 ||| ||| | |||| ||| ||||| ||| |||| || || |||||||| || || Sbjct 361844 ACTACATGTCGAACAAGTTCTTCACGCATGCCTCGCCCACGCTCTTCAACGCCGGCACCC 361785 Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372 || | |||||||| ||||||||| |||| |||||||||||| ||||| || | Sbjct 361784 CACAGGCCCAGATGTCCTCCTGCTTCCTCGTGGACATGAAGGATGACAGCATCGAGGGTA 361725 Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432 ||||||| || |||||| |||||| ||||||||| | | ||||| || || || Sbjct 361724 TCTACGACACCCTCAAGACCTGTGCCATGATCTCCAAGACGGCCGGTGGAATTGGCCTCA 361665 Query 53433 ACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGA 53490 | || || | || |||| || | ||| | || || || |||||| || | Sbjct 361664 A-TG-TCCACCGCATCCGGGCTACTGGCTCCTACATTGCCGGCACAAACGGCACATCCAA 361607 Query 53491 TGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGG 53550 || ||| | ||||||||||| |||| |||||||||||| || || || ||||||| || Sbjct 361606 CGGCATCATCCCTATGCTCCGTGTCTACAACAACACGGCACGCTATGTGGACCAGGGCGG 361547 Query 53551 TGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGA 53610 |||||| || | ||| ||| ||||| ||||| ||||||||||| | | || Sbjct 361546 AAACAAGCGCCCCGGTGCTTTCTGCATATACCTTGAGCCTTGGCACGCCGATGTCTTTGA 361487 Query 53611 GTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTAC 53670 ||||||||| ||||| ||| || || | || ||||| || ||| || ||||| Sbjct 361486 GTTTCTCGATCTGCGCAAGAACCATGGCAAGGAGGAGATCCGTGCCCGCGATCTGTTCCT 361427 Query 53671 AGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCT 53730 || || ||||| || || || |||||| | ||||||||| | | || ||| || Sbjct 361426 CGCCCTCTGGATCCCTGATCTGTTCATGAAGCGTGTGGAGAAGAATGGCGATTGGACACT 361367 Query 53731 GATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGAT 53790 ||||||||| ||||||||||||||| | || ||| || || |||||| | | | Sbjct 361366 GATGTGCCCCAACGAGTGCCCCGGCATGGCGGACTGCTATGGCGACGAGTTTGAGGCCCT 361307 Query 53791 GTATCGGACGTACGCAGTTC-AGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTAT 53849 ||| || ||| | || | | || ||| |||| | ||||||| | || | | Sbjct 361306 GTACGAGAAGTATG-AGCGCGAAGGTCGCGGTCGTAAGACGATCAAGGCCCAGAAGCTCT 361248 Query 53850 GGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATT 53909 || | || || ||| | |||| ||||||||| | |||| |||| ||||||||| Sbjct 361247 GGTACGCCATTCTCGAAGCCCAGACGGAGACGGGCAACCCGTTCATGCTCTACAAGGACC 361188 Query 53910 CGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATC 53950 |||| |||||||||||||||||| | ||| |||| Sbjct 361187 ACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGCACCATC 361147 Score = 136 bits (150), Expect = 4e-27 Identities = 286/422 (68%), Gaps = 6/422 (1%) Strand=Plus/Plus Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211 || || |||||||| || |||||||| | ||||| ||||||||| | || ||||| | Sbjct 157175 CCGGTGCCGATACCATCGGCACCATTGACCAGAACCATCGGCACAATGGGGGCGTAGTTC 157234 Query 117212 TCAGGCTCCACCT-GCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGG 117270 | ||||| | || | || ||||| || || || |||||| | | ||| || Sbjct 157235 TTCGGCTCGATAACGCTGCCC-TCGTCAATGTTGTTCTCGAGCACAGGCTCGTCCAGAGG 157293 Query 117271 ATCGAATATGTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGC 117330 || ||| | | | || | || || ||||||||||| |||| || ||||| Sbjct 157294 ATTGAACACACGGCGAGCAAAGGGCGACAGACGGGTGAAAATGTATCGAGCACTAGCAGC 157353 Query 117331 ATCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTT 117390 || |||||| | |||||| | ||| || | || || || |||| ||| | ||| Sbjct 157354 GTCGGAGCCACCGGAAAGACGAGAACCAAAGTTACCGCTGGGTTCCAGACAGTTGATGTT 157413 Query 117391 GTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCACC 117450 ||||| ||| |||||||| || |||| | |||||| || || || ||| ||||| Sbjct 157414 GTTGGAGCCGACAAAGTTCTGTGCCAGGCCGACAATGGTCTGGTGCAGCGACGCATCACC 157473 Query 117451 ATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTC--T 117508 ||||| || || | | | | | || |||| |||| || | ||||||| ||| | Sbjct 157474 GTGGTGGTAAGCAGCCAGTTTGGATACAGAGCCGGCCAACTCAAACACCTTCTGGTCCTT 157533 Query 117509 GACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACCA 117568 ||| | ||||||||| ||||| | || || ||||||||||||| ||||| || || Sbjct 157534 GAC--AATGTTCTTCTTCAGGCACGTGTAGATGACCTTGCGCTGACCGGGCTTGAGTCCG 157591 Query 117569 TC 117570 || Sbjct 157592 TC 157593 Score = 129 bits (142), Expect = 6e-25 Identities = 556/857 (65%), Gaps = 48/857 (6%) Strand=Plus/Minus Query 55097 GACTTTGACAAGCTTCACGAAGTGACGCGTGTTGTGACTCGGAACCTGAACCGGGTCATC 55156 ||||| | ||||||||||| || | | | || || |||||||||| ||||| Sbjct 361029 GACTTCAAGAAGCTTCACGAGGTTGCACAGCTGGTCGTCCGCAACCTGAACCACGTCATT 360970 Query 55157 GACAAGAATTACTACCCGACTGAAGCGGCGCGCAAGTCCA---ACCTCCGGCACCGGCCC 55213 ||| || |||||||| || ||| | |||| || || | || || ||||| Sbjct 360969 GACGTCAACTACTACCC---TGTGCCGGAGGCCAAGAACAGCAACATGCGCCATCGGCCT 360913 Query 55214 ATCGCCATCGGTGTACAGGGCTTGGCCGACATCTTCATGATGCTCGGATTGCCCTTCGAC 55273 |||| | ||||| ||||| |||| || |||| || || | |||||||||| Sbjct 360912 ATCGGTCTGGGTGTGCAGGGACTGGCGGATGCCTTCTTGGCTCTGCGCATGCCCTTCGAG 360853 Query 55274 TCGGAACCTGCTCGAGAAATTAACCAGGACATCTTC-AGTCGCATCTACTTTGCAGCGCT 55332 ||| || || || | ||| || | ||||| || | ||| ||| || || || Sbjct 360852 TCGCCCGAGGCCCGTGAGCTCAACAAGCAAATCTTTGAGAC-CATTTACCACGCCGCTCT 360794 Query 55333 CGAGGAGTCGTGTCATCTGGCTATGAGCGAGGGGACCTACGAGACGTTCCGTGATTCGCC 55392 || |||||| ||||||| | || |||||| |||||| ||||| | | || || Sbjct 360793 GACGGCGTCGTGCGATCTGGCCAAGATCGAGGGCACCTACTCGACGTACGAGGGCTCTCC 360734 Query 55393 AGCTGACA-AGGGACTTCTCCAGTTCGATCTATGGGGC---AAG---TCTGACCCCATGT 55445 | || | |||| |||| || ||| | |||| | ||| ||||||| ||| Sbjct 360733 CG-TGTCTCAGGGCATTCTGCAACCCGACATGTGGGACGTGAAGCCGTCTGACC---TGT 360678 Query 55446 TTGACAAG---TTGAAGCATG---ACATTCACTTGTGGGGCCTACGCAACTCCCTGCTCG 55499 ||| | | | || | | ||| | | ||| | |||||| ||||| | Sbjct 360677 GGGACTGGGACTCGCTGCGTCTGAAGATTAAGGAGCACGGCGTGCGCAACAGTCTGCTGG 360618 Query 55500 TGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAACAACGAGGCGTTCGAGC 55559 |||| || ||||| || ||||||||| | ||||| |||||||||||||| ||||||| Sbjct 360617 TGGCCCCCATGCCGACAGCGTCGACGTCGCAGATTCTGGGCAACAACGAGTGCTTCGAGC 360558 Query 55560 CGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAGTTTGTCATGATCAACA 55619 |||||||| ||||||||||| |||||| || || || ||||| || ||||| Sbjct 360557 CGTACACGTCCAACATCTACTCGCGCCGTGTGCTGGCGGGCGAGTTCCAGGTGGTCAACC 360498 Query 55620 AGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAACCCGCAGATCAAGA--CGGA 55677 | || | ||||| || | || |||| | || |||| || | Sbjct 360497 CGTGGCTGCTGAAGGATCTCGTTGACATGGGTCTGTGGTCGGACAACATGAAGAACCGCA 360438 Query 55678 TATTGTGCGGAACGGGGGGTCCG-TCCAGA--ATCTGGAGATTCCTCTGCGTC-TCAAGG 55733 | | ||| || ||| ||| || |||||| ||| | ||| || | |||||| Sbjct 360437 TCAT-TGCCGA--GGGCGGTTCGATCCAGAACATCCCCAACATCCCGGCCGACATCAAGG 360381 Query 55734 AGATTTACCGGACGGTGTGGGAGATTCCACAG---AAGAGTCTGATTGACATGAGTGCTG 55790 | ||| ||| ||||||||||| | ||| | || | || | ||| || | Sbjct 360380 CTCTCTACAAGACCGTGTGGGAGATCTCCCAGCGCACGATTGTG---CAGATGGCCGCCG 360324 Query 55791 ATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATG-GAGAATCCTTCA 55849 | || || || | ||||||||||| ||||| ||||||||| |||| | || || || Sbjct 360323 ACCGGGGCGCATTTATCGACCAGTCGCAGTCGCTGAACATCCACATGCGCGAGCCCACCA 360264 Query 55850 CTGGCCAAGTT---GAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGT 55906 ||| |||| | |||| |||||||| ||| |||||| ||| ||||||||||| Sbjct 360263 -TGGGCAAGATCACGAGC---ATGCACTTCGCCGGCTGGAAGCTGGGTCTCAAGACGGGA 360208 Query 55907 ATGTACTATCTGCGGAC 55923 |||||||| ||||| || Sbjct 360207 ATGTACTACCTGCGCAC 360191 Score = 122 bits (134), Expect = 1e-22 Identities = 272/403 (67%), Gaps = 4/403 (1%) Strand=Plus/Plus Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935 ||||| ||||| || || ||||| |||||||||| |||||||||||| |||||||| | Sbjct 157175 CCGGTGCCGATACCATCGGCACCATTGACCAGAACCATCGGCACAATGGGGGCGTAGTTC 157234 Query 151936 TCCGGCTCCACCT-GTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCCGG 151994 | |||||| | | || || || || || || | | || | | ||| || Sbjct 157235 TTCGGCTCGATAACGCTGCCC-TCGTCAATGTTGTTCTCGAGCACAGGCTCGTCCAGAGG 157293 Query 151995 ATCGAATATCCGTCGAGTCATAGGACT-CAAACGCGTGAAGATGTATCGGGAGCTGGCCG 152053 || ||| | || |||| || ||| | || ||| ||||| |||||||| | || || | Sbjct 157294 ATTGAACACACGGCGAG-CAAAGGGCGACAGACGGGTGAAAATGTATCGAGCACTAGCAG 157352 Query 152054 CATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGGT 152113 | || |||||| | || || | ||||| | || ||| || || ||||| || Sbjct 157353 CGTCGGAGCCACCGGAAAGACGAGAACCAAAGTTACCGCTGGGTTCCAGACAGTTGATGT 157412 Query 152114 TGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCAC 152173 |||||| ||| || || ||||| |||| ||||| || ||||| ||| |||| Sbjct 157413 TGTTGGAGCCGACAAAGTTCTGTGCCAGGCCGACAATGGTCTGGTGCAGCGACGCATCAC 157472 Query 152174 CGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTCCG 152233 ||||||| || || | | | | | | | || ||||||| ||||||| |||| Sbjct 157473 CGTGGTGGTAAGCAGCCAGTTTGGATACAGAGCCGGCCAACTCAAACACCTTCTGGTCCT 157532 Query 152234 TCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTG 152276 | | ||||||||| || || | ||| || ||||||||||| Sbjct 157533 TGACAATGTTCTTCTTCAGGCACGTGTAGATGACCTTGCGCTG 157575 >seq222 Length=676535 Score = 102 bits (112), Expect = 9e-17 Identities = 300/456 (66%), Gaps = 20/456 (4%) Strand=Plus/Minus Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522 || |||||||| ||||| || || ||||||||||| || ||| |||||||||||||| Sbjct 132111 TAGTCACCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCCAGGGAGATGTTCTCCATG 132052 Query 74523 CAGTCGAAAGGGTTCTTTGCACCGTAAATAGGCTTCTCC---CCAAACTGTGCCATGAGG 74579 ||||||| ||||| | | | ||| | ||| || |||| ||| ||| Sbjct 132051 AAGTCGAAGGGGTTGGTGGAGCGGTACAC---CTTGTCATTGCCAAGAGCAACCAGTAGG 131995 Query 74580 CGATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAGTTTG 74639 || || || || || | |||||| ||| |||| | | |||||||| || | Sbjct 131994 CGGTCGGCAACGAACTCAATGTATTGCTTCATGAGGGTGGAGTTCATGCCGAGAAGAGCG 131935 Query 74640 CACGGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCCCATTGGACAATCTTG 74699 || || || |||||||| | ||||| ||| | || | ||| | |||||| | Sbjct 131934 CAGGGAAGCGCCTCGGTCAGGAACTCCTGCTCAATCTTGACAGCA---TCGACAATGATA 131878 Query 74700 T----GAATGTCT--TTGGAAGGGCACTTTTCCCTCAGGTGAGAGTAAAGC-GTCACGGC 74752 | || || ||| |||| || | | || || ||| | ||| | || ||| Sbjct 131877 TCCTCGATCAGCTGCTTGCTCGGGCGGTTCT---TGAGATGCGAGAAGAGCAGGCA-GGC 131822 Query 74753 AAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGG 74812 ||| || ||| ||| || || | || | || ||||| || | |||||||| Sbjct 131821 AAAGTCGGTGTGCAGGCCCTCGTCACGAGAAATAAGCTCGTTCGAGAATGTCAGGCCAGG 131762 Query 74813 CATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCC 74872 ||| || ||||||||||||||||| ||||||| |||| | || |||||||| || || Sbjct 131761 CATCAGGCCACGCTTCTTCAACCAGAAGATGGAGGAGAAAGCCCCGCTGAAGAAAATACC 131702 Query 74873 TTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAA 74908 || || || || ||||| | ||| || ||||| Sbjct 131701 CTCAACGGCGGCGAAAGCGACCAAGCGCTGGGCGAA 131666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547213188677800