Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12-
02] 411 sequences; 26,537,341 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq365 158 1e-33
seq64 95.1 1e-14
seq124 87.8 2e-12
>seq365
Length=144107
Score = 158 bits (174), Expect = 1e-33
Identities = 173/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || |||||||| |||||| | || |||||||| || || ||||
Sbjct 48252 ATGCAGATCTTTGTCAAGACTCTGACGGGCAAGACGATCACTCTTGAGGTCGAGTCGTCG 48193
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| |||| || | ||||| || ||||| |||||||| ||||| || ||||||||
Sbjct 48192 GACACGATCGACAACGTCAAGAGCAAGATTCAGGACAAAGAGGGCATTCCCCCCGATCAG 48133
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||| ||||| || | || || | ||| ||||||| ||||||
Sbjct 48132 CAGCGTCTCATTTTCGCTGGCAAGCAGCTTGAGGATGGGCGGACGCTTTCCGACTACAAC 48073
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| |||||||| || | ||| |||| | ||| | || ||||||||
Sbjct 48072 ATTCAGAAGGAGTCTACGCTGCATCTGGTGCTCCGTCTCCGTGGTGGCAT 48023
Score = 156 bits (172), Expect = 4e-33
Identities = 173/231 (75%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| ||||| ||||| || ||||||||| | || || || || || ||| ||||
Sbjct 48481 CATGCAGATCTTTGTCAAAACGCTTACCGGCAAGACCATCACACTAGAGGTTGAATCGTC 48422
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| |||| || | ||||| || ||||| |||||||| ||||| || ||||||||
Sbjct 48421 GGACACGATAGACAACGTCAAGAGCAAGATTCAGGACAAAGAGGGCATTCCCCCCGATCA 48362
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||||| | || | ||| ||||| || | || ||| || ||| | |||||||||||
Sbjct 48361 GCAGCGCCTCATTTTCGCTGGCAAGCAGCTCGAGGACGGTCGGACGCTATCCGATTACAA 48302
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| || ||||||||||| | || | || ||||| |||| ||||| ||
Sbjct 48301 CATCCAGAAGGAGTCGACGCTCCACCTCGTCCTGCGTCTGCGTGGTGGTAT 48251
Score = 129 bits (142), Expect = 5e-25
Identities = 167/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| ||||| || || || || |||||| | ||||| | || ||||| ||||
Sbjct 48025 CATGCAGATCTTTGTGAAGACGCTCACGGGCAAGACGATTACGTTGGAGGTGGAGTCGTC 47966
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| ||||||| | || || ||| || |||||||| || || || || || || ||
Sbjct 47965 AGACACGATTGACAATGTGAAGTCAAAGATCCAAGACAAGGAGGGTATCCCGCCAGACCA 47906
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|||||| | || | || ||||| ||| |||| || | ||| | || || |||||
Sbjct 47905 GCAGCGTCTGATCTTTGCAGGCAAGCAACTGGAGGATGGGCGCACCCTGTCGGACTACAA 47846
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||||| ||||| ||||| | || ||||| ||||| | || || |||||
Sbjct 47845 CATTCAGAAGGAATCGACGCTGCACTTGGTGCTGCGTCTTCGCGGCGGCAT 47795
>seq64
Length=19946
Score = 95.1 bits (104), Expect = 1e-14
Identities = 138/195 (71%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 26985 GCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCG 27044
||||||||||| || || || || ||||| |||||| | || || ||||| || ||
Sbjct 14482 GCCATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGAGC 14423
Query 27045 TCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGAT 27104
|||| | || || | ||||| || ||||| |||||||| ||||| || || ||
Sbjct 14422 AGCGACACAATCGACAATGTCAAGTCCAAGATTCAGGACAAAGAGGGCATCCCCCCTGAC 14363
Query 27105 CAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTAC 27164
|| ||||| | || | ||| || || || |||| || || ||| | || || |||
Sbjct 14362 CAGCAGCGCCTGATTTTCGCGGGAAAGCAGCTGGAGGATGGTCGGACTCTCTCTGACTAC 14303
Query 27165 AACATTCAAAAGGAG 27179
||||| |||||||||
Sbjct 14302 AACATCCAAAAGGAG 14288
>seq124
Length=325275
Score = 87.8 bits (96), Expect = 2e-12
Identities = 152/221 (69%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056
|| || || || || || |||||| | || || | || || || | || ||| ||||
Sbjct 289615 TTCGTGAAGACCCTTACGGGCAAGACCATCACCTTGGAGGTCGAGTCCTCGGACACGATC 289556
Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116
|| | ||||| || || || ||||| || ||||| || ||||| || ||||| |
Sbjct 289555 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCAGCAGCGCCTG 289496
Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176
|| | || ||||| || | || ||| | |||| | || || |||||||| || |||
Sbjct 289495 ATTTTTGCTGGCAAGCAGCTCGAGGACGGCCGGACCCTGTCGGACTACAACATCCAGAAG 289436
Query 27177 GAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||||||| | || |||| | || |||| ||||| ||
Sbjct 289435 GAGTCGACCCTGCACCTGGTGCTCCGCCTGCGTGGTGGTAT 289395
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434916165606720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |