Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12-
02] 411 sequences; 26,537,341 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq365 152 1e-31
seq64 149 1e-30
seq124 141 2e-28
>seq365
Length=144107
Score = 152 bits (168), Expect = 1e-31
Identities = 161/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || || || || || ||||| || || ||||| || || | ||| |||| |||||
Sbjct 48041 AGCACCAGATGCAGCGTAGACTCCTTCTGAATGTTGTAGTCGGAAAGCGTCCGCCCATCC 48100
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| ||||| || || || || || || || |||| || || ||||||
Sbjct 48101 TCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATGCCCTCTTTGTCC 48160
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| || ||||| ||||| ||||| || || ||||| ||||||||||||
Sbjct 48161 TGAATCTTGCTCTTGACGTTGTCGATCGTGTCCGACGACTCGACCTCAAGAGTGATCGTC 48220
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| |||||||| ||||| | ||||||
Sbjct 48221 TTGCCCGTCAGAGTCTTGACAAAGATCTGCAT 48252
Score = 149 bits (164), Expect = 1e-30
Identities = 160/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| ||||| || || ||||| || |||||||| ||||| | || |||| || ||
Sbjct 48269 AGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGATAGCGTCCGACCGTCC 48328
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| ||||| || ||||| || || || || |||| || || ||||||
Sbjct 48329 TCGAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGATCGGGGGGAATGCCCTCTTTGTCC 48388
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| || ||||| || || ||||| || ||||||||| || ||||| |||
Sbjct 48389 TGAATCTTGCTCTTGACGTTGTCTATCGTGTCCGACGATTCAACCTCTAGTGTGATGGTC 48448
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || || || || ||||| | ||||||
Sbjct 48449 TTGCCGGTAAGCGTTTTGACAAAGATCTGCAT 48480
Score = 147 bits (162), Expect = 5e-30
Identities = 165/221 (75%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
||||| | || || | ||| || || || || || || ||||| || |||| |||||
Sbjct 47804 CGAAGACGCAGCACCAAGTGCAGCGTCGATTCCTTCTGAATGTTGTAGTCCGACAGGGTG 47863
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| ||||| ||||| ||||||||||| ||||| || || || ||||| || || | ||
Sbjct 47864 CGCCCATCCTCCAGTTGCTTGCCTGCAAAGATCAGACGCTGCTGGTCTGGCGGGATACCC 47923
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
|||||||| ||||||||| ||||| || || || ||||| || || ||||| |
Sbjct 47924 TCCTTGTCTTGGATCTTTGACTTCACATTGTCAATCGTGTCTGACGACTCCACCTCCAAC 47983
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| |||||||| |||||||| ||||| ||||| | ||||||
Sbjct 47984 GTAATCGTCTTGCCCGTGAGCGTCTTCACAAAGATCTGCAT 48024
Score = 143 bits (158), Expect = 6e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || ||||| || || ||||| || |||||||| || |||| ||| || | ||| ||
Sbjct 47585 AGCACCAGGTGCAGCGTTGACTCCTTCTGGATGTTGTAGTCCGAAAGTGTGCGTCCGTCC 47644
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||||||||| || ||||| || || || ||||| || || | || |||||||||
Sbjct 47645 TCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCC 47704
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || || || || || || || ||| || ||||| || || ||||||
Sbjct 47705 TGGATCTTCGACTTGACATTGTCAATCGTATCCGAGGACTCCACCTCAAGCGTAATCGTC 47764
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || | ||||| || || | ||||||
Sbjct 47765 TTTCCTGTCAACGTCTTGACGAAGATCTGCAT 47796
>seq64
Length=19946
Score = 149 bits (164), Expect = 1e-30
Identities = 160/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || ||||| || ||| ||| ||||||||||| || || | || |||| |||||
Sbjct 14268 AGCACCAGGTGGAGCGTGCTCTCCTTTTGGATGTTGTAGTCAGAGAGAGTCCGACCATCC 14327
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
||||||||||| || ||||| || ||||| || |||||||| || | || || ||||||
Sbjct 14328 TCCAGCTGCTTTCCCGCGAAAATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCTTTGTCC 14387
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| || || || ||||| ||||| ||| || ||||| || ||||| |||
Sbjct 14388 TGAATCTTGGACTTGACATTGTCGATTGTGTCGCTGCTCTCGACCTCAAGGGTGATGGTC 14447
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| || ||||| || || | ||||||
Sbjct 14448 TTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 14479
>seq124
Length=325275
Score = 141 bits (156), Expect = 2e-28
Identities = 153/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || ||||| || || ||||| || |||||||| || |||| ||||||| || ||
Sbjct 289413 AGCACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGACAGGGTCCGGCCGTCC 289472
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| || || || ||||| || ||||| || || | || |||||||||
Sbjct 289473 TCGAGCTGCTTGCCAGCAAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCC 289532
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || || || ||||| ||||| ||| || ||||| | ||||| |||
Sbjct 289533 TGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTC 289592
Query 211083 TTTCCCGTGAGAGTCTTTACAAA 211105
|| ||||| || ||||| || ||
Sbjct 289593 TTGCCCGTAAGGGTCTTCACGAA 289615
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159145895978015
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |