Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12- 02] 411 sequences; 26,537,341 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq365 152 1e-31 seq64 149 1e-30 seq124 141 2e-28 >seq365 Length=144107 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || || || || || ||||| || || ||||| || || | ||| |||| ||||| Sbjct 48041 AGCACCAGATGCAGCGTAGACTCCTTCTGAATGTTGTAGTCGGAAAGCGTCCGCCCATCC 48100 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| ||||| || || || || || || || |||| || || |||||| Sbjct 48101 TCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATGCCCTCTTTGTCC 48160 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||||| ||||| ||||| || || ||||| |||||||||||| Sbjct 48161 TGAATCTTGCTCTTGACGTTGTCGATCGTGTCCGACGACTCGACCTCAAGAGTGATCGTC 48220 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| |||||||| ||||| | |||||| Sbjct 48221 TTGCCCGTCAGAGTCTTGACAAAGATCTGCAT 48252 Score = 149 bits (164), Expect = 1e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || || ||||| || |||||||| ||||| | || |||| || || Sbjct 48269 AGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGATAGCGTCCGACCGTCC 48328 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| ||||| || ||||| || || || || |||| || || |||||| Sbjct 48329 TCGAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGATCGGGGGGAATGCCCTCTTTGTCC 48388 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||||| || || ||||| || ||||||||| || ||||| ||| Sbjct 48389 TGAATCTTGCTCTTGACGTTGTCTATCGTGTCCGACGATTCAACCTCTAGTGTGATGGTC 48448 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || || || ||||| | |||||| Sbjct 48449 TTGCCGGTAAGCGTTTTGACAAAGATCTGCAT 48480 Score = 147 bits (162), Expect = 5e-30 Identities = 165/221 (75%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | || || | ||| || || || || || || ||||| || |||| ||||| Sbjct 47804 CGAAGACGCAGCACCAAGTGCAGCGTCGATTCCTTCTGAATGTTGTAGTCCGACAGGGTG 47863 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | ||||| ||||| ||||||||||| ||||| || || || ||||| || || | || Sbjct 47864 CGCCCATCCTCCAGTTGCTTGCCTGCAAAGATCAGACGCTGCTGGTCTGGCGGGATACCC 47923 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 |||||||| ||||||||| ||||| || || || ||||| || || ||||| | Sbjct 47924 TCCTTGTCTTGGATCTTTGACTTCACATTGTCAATCGTGTCTGACGACTCCACCTCCAAC 47983 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || |||||||| |||||||| ||||| ||||| | |||||| Sbjct 47984 GTAATCGTCTTGCCCGTGAGCGTCTTCACAAAGATCTGCAT 48024 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || || ||||| || |||||||| || |||| ||| || | ||| || Sbjct 47585 AGCACCAGGTGCAGCGTTGACTCCTTCTGGATGTTGTAGTCCGAAAGTGTGCGTCCGTCC 47644 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| || || || ||||| || || | || ||||||||| Sbjct 47645 TCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCC 47704 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || || || || || ||| || ||||| || || |||||| Sbjct 47705 TGGATCTTCGACTTGACATTGTCAATCGTATCCGAGGACTCCACCTCAAGCGTAATCGTC 47764 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || | ||||| || || | |||||| Sbjct 47765 TTTCCTGTCAACGTCTTGACGAAGATCTGCAT 47796 >seq64 Length=19946 Score = 149 bits (164), Expect = 1e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || ||| ||| ||||||||||| || || | || |||| ||||| Sbjct 14268 AGCACCAGGTGGAGCGTGCTCTCCTTTTGGATGTTGTAGTCAGAGAGAGTCCGACCATCC 14327 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||| || ||||| || ||||| || |||||||| || | || || |||||| Sbjct 14328 TCCAGCTGCTTTCCCGCGAAAATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCTTTGTCC 14387 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || || || ||||| ||||| ||| || ||||| || ||||| ||| Sbjct 14388 TGAATCTTGGACTTGACATTGTCGATTGTGTCGCTGCTCTCGACCTCAAGGGTGATGGTC 14447 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || ||||| || || | |||||| Sbjct 14448 TTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 14479 >seq124 Length=325275 Score = 141 bits (156), Expect = 2e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || || ||||| || |||||||| || |||| ||||||| || || Sbjct 289413 AGCACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGACAGGGTCCGGCCGTCC 289472 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || || || ||||| || ||||| || || | || ||||||||| Sbjct 289473 TCGAGCTGCTTGCCAGCAAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCC 289532 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || ||||| ||||| ||| || ||||| | ||||| ||| Sbjct 289533 TGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTC 289592 Query 211083 TTTCCCGTGAGAGTCTTTACAAA 211105 || ||||| || ||||| || || Sbjct 289593 TTGCCCGTAAGGGTCTTCACGAA 289615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159145895978015