Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12- 02] 411 sequences; 26,537,341 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq365 113 4e-20 seq64 95.1 1e-14 >seq365 Length=144107 Score = 113 bits (124), Expect = 4e-20 Identities = 153/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 ||||| ||| ||||| ||| || || || || || |||| ||| || || | || || Sbjct 48043 CACCAGATGCAGCGTAGACTCCTTCTGAATGTTGTAGTCGGAAAGCGTCCGCCCATCCTC 48102 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 |||||| ||||| || || || ||||||||||| |||| ||| | || |||||||||| Sbjct 48103 AAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATGCCCTCTTTGTCCTG 48162 Query 39195 GATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253 || || |||| ||| | | | ||| || |||||| || || | ||||| | | Sbjct 48163 AATCTTGCTCTTGA-CGTTGTCGATCGTGTCCGACGACTCGACCTCAAGAGTGATCGTCT 48221 Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | |||||||| || || |||||||| ||||| Sbjct 48222 TGCCCGTCAGAGTCTTGACAAAGATCTGCAT 48252 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 ||||| || ||||| ||| || || || || || || | |||||| ||| |||| || Sbjct 47587 CACCAGGTGCAGCGTTGACTCCTTCTGGATGTTGTAGTCCGAAAGTGTGCGTCCGTCCTC 47646 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||| ||||| ||||| || || ||||||||||| | || | || ||| |||||| Sbjct 47647 CAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTG 47706 Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 ||| ||| |||| | | | |||||| |||||||| || | ||| || | || Sbjct 47707 GATCTTCGACTTGACATTGTCAATCGTATCCGAGGACTCCACCTCAAGCGTAATCGTCTT 47766 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||| |||| ||| || || ||||| ||||| Sbjct 47767 TCCTGTCAACGTCTTGACGAAGATCTGCAT 47796 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || ||||| || || || || || || || | || || || | || || Sbjct 47815 CACCAAGTGCAGCGTCGATTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGCCCATCCTC 47874 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 || || ||||| ||||| || |||||||||||||| | || | | ||| ||||| Sbjct 47875 CAGTTGCTTGCCTGCAAAGATCAGACGCTGCTGGTCTGGCGGGATACCCTCCTTGTCTTG 47934 Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 ||| || || | | | | ||| || ||||||||| |||| ||| || | || Sbjct 47935 GATCTTTGACTTCACATTGTCAATCGTGTCTGACGACTCCACCTCCAACGTAATCGTCTT 47994 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||||| ||||| || |||||||| ||||| Sbjct 47995 GCCCGTGAGCGTCTTCACAAAGATCTGCAT 48024 >seq64 Length=19946 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 ||||| || ||||||||||| ||||| || || || || | || || || | || || Sbjct 14270 CACCAGGTGGAGCGTGCTCTCCTTTTGGATGTTGTAGTCAGAGAGAGTCCGACCATCCTC 14329 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||| || ||||| || || || ||||||||||| | ||| | || |||||||||| Sbjct 14330 CAGCTGCTTTCCCGCGAAAATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCTTTGTCCTG 14389 Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 || || |||| | | | || ||||| ||| || || | ||||| | || Sbjct 14390 AATCTTGGACTTGACATTGTCGATTGTGTCGCTGCTCTCGACCTCAAGGGTGATGGTCTT 14449 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||||||| || || || ||||| ||||| Sbjct 14450 GCCCGTCAGGGTCTTCACGAAGATCTGCAT 14479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429543448379243