Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12-
02] 411 sequences; 26,537,341 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq365 113 4e-20
seq64 95.1 1e-14
>seq365
Length=144107
Score = 113 bits (124), Expect = 4e-20
Identities = 153/211 (73%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134
||||| ||| ||||| ||| || || || || || |||| ||| || || | || ||
Sbjct 48043 CACCAGATGCAGCGTAGACTCCTTCTGAATGTTGTAGTCGGAAAGCGTCCGCCCATCCTC 48102
Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194
|||||| ||||| || || || ||||||||||| |||| ||| | || ||||||||||
Sbjct 48103 AAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATGCCCTCTTTGTCCTG 48162
Query 39195 GATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253
|| || |||| ||| | | | ||| || |||||| || || | ||||| | |
Sbjct 48163 AATCTTGCTCTTGA-CGTTGTCGATCGTGTCCGACGACTCGACCTCAAGAGTGATCGTCT 48221
Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
| |||||||| || || |||||||| |||||
Sbjct 48222 TGCCCGTCAGAGTCTTGACAAAGATCTGCAT 48252
Score = 109 bits (120), Expect = 5e-19
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134
||||| || ||||| ||| || || || || || || | |||||| ||| |||| ||
Sbjct 47587 CACCAGGTGCAGCGTTGACTCCTTCTGGATGTTGTAGTCCGAAAGTGTGCGTCCGTCCTC 47646
Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194
||||| ||||| ||||| || || ||||||||||| | || | || ||| ||||||
Sbjct 47647 CAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTG 47706
Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254
||| ||| |||| | | | |||||| |||||||| || | ||| || | ||
Sbjct 47707 GATCTTCGACTTGACATTGTCAATCGTATCCGAGGACTCCACCTCAAGCGTAATCGTCTT 47766
Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
||| |||| ||| || || ||||| |||||
Sbjct 47767 TCCTGTCAACGTCTTGACGAAGATCTGCAT 47796
Score = 82.4 bits (90), Expect = 7e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134
|||||| || ||||| || || || || || || || | || || || | || ||
Sbjct 47815 CACCAAGTGCAGCGTCGATTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGCCCATCCTC 47874
Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194
|| || ||||| ||||| || |||||||||||||| | || | | ||| |||||
Sbjct 47875 CAGTTGCTTGCCTGCAAAGATCAGACGCTGCTGGTCTGGCGGGATACCCTCCTTGTCTTG 47934
Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254
||| || || | | | | ||| || ||||||||| |||| ||| || | ||
Sbjct 47935 GATCTTTGACTTCACATTGTCAATCGTGTCTGACGACTCCACCTCCAACGTAATCGTCTT 47994
Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
||||| ||||| || |||||||| |||||
Sbjct 47995 GCCCGTGAGCGTCTTCACAAAGATCTGCAT 48024
>seq64
Length=19946
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134
||||| || ||||||||||| ||||| || || || || | || || || | || ||
Sbjct 14270 CACCAGGTGGAGCGTGCTCTCCTTTTGGATGTTGTAGTCAGAGAGAGTCCGACCATCCTC 14329
Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194
||||| || ||||| || || || ||||||||||| | ||| | || ||||||||||
Sbjct 14330 CAGCTGCTTTCCCGCGAAAATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCTTTGTCCTG 14389
Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254
|| || |||| | | | || ||||| ||| || || | ||||| | ||
Sbjct 14390 AATCTTGGACTTGACATTGTCGATTGTGTCGCTGCTCTCGACCTCAAGGGTGATGGTCTT 14449
Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
|||||||| || || || ||||| |||||
Sbjct 14450 GCCCGTCAGGGTCTTCACGAAGATCTGCAT 14479
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429543448379243
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |