Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12-
02] 411 sequences; 26,537,341 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq365 89.7 3e-13
>seq365
Length=144107
Score = 89.7 bits (98), Expect = 3e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || ||||| || || || || || ||||| || || ||||| || ||
Sbjct 48480 ATGCAGATCTTTGTCAAAACGCTTACCGGCAAGACCATCACACTAGAGGTTGAATCGTCG 48421
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| | || | | || || ||| |||||||| || | || || |||||
Sbjct 48420 GACACGATAGACAACGTCAAGAGCAAGATTCAGGACAAAGAGGGCATTCCCCCCGATCAG 48361
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||||| | || || || ||||| || || || |||| || || || ||||||||||
Sbjct 48360 CAGCGCCTCATTTTCGCTGGCAAGCAGCTCGAGGACGGTCGGACGCTATCCGATTACAAC 48301
Query 23791 ATACAAAAAGAGTCCAC 23807
|| || || ||||| ||
Sbjct 48300 ATCCAGAAGGAGTCGAC 48284
Score = 86.0 bits (94), Expect = 4e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || || || || ||||| || ||||||||||| || || || || ||
Sbjct 48252 ATGCAGATCTTTGTCAAGACTCTGACGGGCAAGACGATCACTCTTGAGGTCGAGTCGTCG 48193
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| | || | | || || ||| |||||||| || | || || |||||
Sbjct 48192 GACACGATCGACAACGTCAAGAGCAAGATTCAGGACAAAGAGGGCATTCCCCCCGATCAG 48133
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|||||| | || || || ||||| || || || || | || || | ||| ||||||
Sbjct 48132 CAGCGTCTCATTTTCGCTGGCAAGCAGCTTGAGGATGGGCGGACGCTTTCCGACTACAAC 48073
Query 23791 ATACAAAAAGAGTCCAC 23807
|| || || ||||| ||
Sbjct 48072 ATTCAGAAGGAGTCTAC 48056
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338007906888788
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |