Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12- 02] 411 sequences; 26,537,341 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq401 145 1e-29 >seq401 Length=585928 Score = 145 bits (160), Expect = 1e-29 Identities = 469/718 (65%), Gaps = 20/718 (3%) Strand=Plus/Plus Query 77759 GATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAA 77818 ||| |||||||| || | ||||||||||| ||||| |||||| || || || || Sbjct 361147 GATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAA 361206 Query 77819 CGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAG-CTTTTA 77877 ||| | || || || |||| | ||||| ||| | | ||||| | ||| | | || | Sbjct 361207 CGGGTTGCCCGTCTCCGTCTGGGCTTCGAGAATGGCGTACCAGA-GCTTCTGGGCCTTGA 361265 Query 77878 TCATAGATTTGTATCGCCTC--TCTCTTTCATATTGA--GTATATAGCCGTTCAAATTCA 77933 || | || | ||| | || | ||||| | ||| | ||| ||||| || Sbjct 361266 TCGTC--TTACGACCGCGACCTTCGCGCTCATACTTCTCGTACAGGGCC--TCAAACTCG 361321 Query 77934 TCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCA 77993 || || | || ||| || ||||| || || |||||||||| || ||| || ||| Sbjct 361322 TCGCCATAGCAGTCCGCCATGCCGGGGCACTCGTTGGGGCACATCAGTGTCCAATCGCCA 361381 Query 77994 TCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGG 78053 | | || || || ||||| || |||||||| ||||| || || | || ||||| ||| Sbjct 361382 TTCTTCTCCACACGCTTCATGAACAGATCAGGGATCCAGAGGGCGAGGAACAGATCGCGG 361441 Query 78054 GTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAA 78113 | | || || || || ||||| |||||||||||||| | | ||| | Sbjct 361442 GCACGGATCTCCTCCTTGCCATGGTTCTTGCGCAGATCGAGAAACTCAAAGACATCGGCG 361501 Query 78114 TGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATA 78173 ||||| || || || ||||| | | | || || || || || || ||||| || | | Sbjct 361502 TGCCAAGGCTCAAGGTATATGCAGAAAGCACCGGGGCGCTTGTTTCCGCCCTGGTCCACA 361561 Query 78174 TATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTT 78233 || | || ||||| || || || | | ||| || || || ||||| ||||| || ||| Sbjct 361562 TAGCGTGCCGTGTTGTTGTAGACACGGAGCATAGGGATGATGCCGTTGGATGTGCCGTTT 361621 Query 78234 GTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATAT----CCCTATTCC 78289 || || | ||| || ||| | || || || |||| || || ||||| Sbjct 361622 GTGCCGGCAATGTAGGAGCCAGTAGCCCGGAT----GCGGTGGACATTGAGGCCAATTCC 361677 Query 78290 TCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACT 78349 || ||| |||| || || | || || || | || |||||||||||||| || || Sbjct 361678 ACCGGCCGTCTTGGAGATCATGGCACAGGTCTTGAGGGTGTCGTAGATACCCTCGATGCT 361737 Query 78350 GTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATT 78409 ||||||| |||||| | || || ||| ||||| || || || || || || Sbjct 361738 GTCATCCTTCATGTCCACGAGGAAGCAGGAGGACATCTGGGCCTGTGGGGTGCCGGCGTT 361797 Query 78410 AAATAATGTCGGAGATGCATGCGTAAACCA-TTTTTCAGAAAGTAGATTGTATGTTTC 78466 || | || || || |||||||| || | || ||| | |||| |||||||| || Sbjct 361798 GAAGAGCGTGGGCGAGGCATGCGTGAAGAACTTGTTCGACATGTAG-TTGTATGTCTC 361854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694665231139040