Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12-
02] 411 sequences; 26,537,341 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq401 145 1e-29
>seq401
Length=585928
Score = 145 bits (160), Expect = 1e-29
Identities = 469/718 (65%), Gaps = 20/718 (3%)
Strand=Plus/Plus
Query 77759 GATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAA 77818
||| |||||||| || | ||||||||||| ||||| |||||| || || || ||
Sbjct 361147 GATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAA 361206
Query 77819 CGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAG-CTTTTA 77877
||| | || || || |||| | ||||| ||| | | ||||| | ||| | | || |
Sbjct 361207 CGGGTTGCCCGTCTCCGTCTGGGCTTCGAGAATGGCGTACCAGA-GCTTCTGGGCCTTGA 361265
Query 77878 TCATAGATTTGTATCGCCTC--TCTCTTTCATATTGA--GTATATAGCCGTTCAAATTCA 77933
|| | || | ||| | || | ||||| | ||| | ||| ||||| ||
Sbjct 361266 TCGTC--TTACGACCGCGACCTTCGCGCTCATACTTCTCGTACAGGGCC--TCAAACTCG 361321
Query 77934 TCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCA 77993
|| || | || ||| || ||||| || || |||||||||| || ||| || |||
Sbjct 361322 TCGCCATAGCAGTCCGCCATGCCGGGGCACTCGTTGGGGCACATCAGTGTCCAATCGCCA 361381
Query 77994 TCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGG 78053
| | || || || ||||| || |||||||| ||||| || || | || ||||| |||
Sbjct 361382 TTCTTCTCCACACGCTTCATGAACAGATCAGGGATCCAGAGGGCGAGGAACAGATCGCGG 361441
Query 78054 GTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAA 78113
| | || || || || ||||| |||||||||||||| | | ||| |
Sbjct 361442 GCACGGATCTCCTCCTTGCCATGGTTCTTGCGCAGATCGAGAAACTCAAAGACATCGGCG 361501
Query 78114 TGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATA 78173
||||| || || || ||||| | | | || || || || || || ||||| || | |
Sbjct 361502 TGCCAAGGCTCAAGGTATATGCAGAAAGCACCGGGGCGCTTGTTTCCGCCCTGGTCCACA 361561
Query 78174 TATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTT 78233
|| | || ||||| || || || | | ||| || || || ||||| ||||| || |||
Sbjct 361562 TAGCGTGCCGTGTTGTTGTAGACACGGAGCATAGGGATGATGCCGTTGGATGTGCCGTTT 361621
Query 78234 GTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATAT----CCCTATTCC 78289
|| || | ||| || ||| | || || || |||| || || |||||
Sbjct 361622 GTGCCGGCAATGTAGGAGCCAGTAGCCCGGAT----GCGGTGGACATTGAGGCCAATTCC 361677
Query 78290 TCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACT 78349
|| ||| |||| || || | || || || | || |||||||||||||| || ||
Sbjct 361678 ACCGGCCGTCTTGGAGATCATGGCACAGGTCTTGAGGGTGTCGTAGATACCCTCGATGCT 361737
Query 78350 GTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATT 78409
||||||| |||||| | || || ||| ||||| || || || || || ||
Sbjct 361738 GTCATCCTTCATGTCCACGAGGAAGCAGGAGGACATCTGGGCCTGTGGGGTGCCGGCGTT 361797
Query 78410 AAATAATGTCGGAGATGCATGCGTAAACCA-TTTTTCAGAAAGTAGATTGTATGTTTC 78466
|| | || || || |||||||| || | || ||| | |||| |||||||| ||
Sbjct 361798 GAAGAGCGTGGGCGAGGCATGCGTGAAGAACTTGTTCGACATGTAG-TTGTATGTCTC 361854
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694665231139040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |