Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12-
02] 411 sequences; 26,537,341 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq365 105 2e-17
seq64 105 2e-17
>seq365
Length=144107
Score = 105 bits (116), Expect = 2e-17
Identities = 149/208 (72%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || || || || || || || |||||||| || | | || | |||||| || |
Sbjct 47818 CAAG-TGCAGCGTCGATTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGCCCATCCTCCA 47876
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || || || ||||| || | ||||||||| | || ||| || ||||| ||||| |
Sbjct 47877 GTTGCTTGCCTGCAAAGATCAGACGCTGCTGGTCTGGCGGGATACCCTCCTTGTCTTGGA 47936
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| ||| || ||| | || | ||||||| ||| || || | ||||| || ||||
Sbjct 47937 TCTTTGACTTCACATTGTCAATCGTGTCTGACGACTCCACCTCCAACGTAATCGTCTTGC 47996
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||||| |||||||| |||| ||||||
Sbjct 47997 CCGTGAGCGTCTTCACAAAGATCTGCAT 48024
Score = 89.7 bits (98), Expect = 1e-12
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || || || || || ||||| || ||||||||||| || | | || | || ||
Sbjct 47585 AGCACCAGGTGCAGCGTTGACTCCTTCTGGATGTTGTAGTCCGAAAGTGTGCGTCCGTCC 47644
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || || ||||| |||| ||||||||| | || ||| || ||||| ||
Sbjct 47645 TCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCC 47704
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || |||||| | || | | || || ||| || ||||| ||||| ||
Sbjct 47705 TGGATCTTCGACTTGACATTGTCAATCGTATCCGAGGACTCCACCTCAAGCGTAATCGTC 47764
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || | ||||| ||||||| ||||||
Sbjct 47765 TTTCCTGTCAACGTCTTGACGAAGATCTGCAT 47796
>seq64
Length=19946
Score = 105 bits (116), Expect = 2e-17
Identities = 141/194 (73%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 151913 CTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTCCCGGCG 151970
||| |||||||||||||| || | | ||| | ||||| || || ||||| || |||
Sbjct 14288 CTCCTTTTGGATGTTGTAGTCAGAGAGAGTCCGACCATCCTCCAGCTGCTTT--CCCGCG 14345
Query 151971 AAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACA 152030
|| || || | ||||||||| | | ||| || || || || ||||| || ||||||
Sbjct 14346 AAAATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCTTTGTCCTGAATCTTGGACTTGACA 14405
Query 152031 GTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTC 152090
| || | |||| ||||| || ||||| || || || |||||||| || ||||||
Sbjct 14406 TTGTCGATTGTGTCGCTGCTCTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTC 14465
Query 152091 ACGAAGACCTGCAT 152104
||||||| ||||||
Sbjct 14466 ACGAAGATCTGCAT 14479
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153814724051781
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |