Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12- 02] 411 sequences; 26,537,341 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq365 105 2e-17 seq64 105 2e-17 >seq365 Length=144107 Score = 105 bits (116), Expect = 2e-17 Identities = 149/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || || || || || |||||||| || | | || | |||||| || | Sbjct 47818 CAAG-TGCAGCGTCGATTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGCCCATCCTCCA 47876 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || ||||| || | ||||||||| | || ||| || ||||| ||||| | Sbjct 47877 GTTGCTTGCCTGCAAAGATCAGACGCTGCTGGTCTGGCGGGATACCCTCCTTGTCTTGGA 47936 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | ||| || ||| | || | ||||||| ||| || || | ||||| || |||| Sbjct 47937 TCTTTGACTTCACATTGTCAATCGTGTCTGACGACTCCACCTCCAACGTAATCGTCTTGC 47996 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||||| |||||||| |||| |||||| Sbjct 47997 CCGTGAGCGTCTTCACAAAGATCTGCAT 48024 Score = 89.7 bits (98), Expect = 1e-12 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || || || || ||||| || ||||||||||| || | | || | || || Sbjct 47585 AGCACCAGGTGCAGCGTTGACTCCTTCTGGATGTTGTAGTCCGAAAGTGTGCGTCCGTCC 47644 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || || ||||| |||| ||||||||| | || ||| || ||||| || Sbjct 47645 TCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCC 47704 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || |||||| | || | | || || ||| || ||||| ||||| || Sbjct 47705 TGGATCTTCGACTTGACATTGTCAATCGTATCCGAGGACTCCACCTCAAGCGTAATCGTC 47764 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || | ||||| ||||||| |||||| Sbjct 47765 TTTCCTGTCAACGTCTTGACGAAGATCTGCAT 47796 >seq64 Length=19946 Score = 105 bits (116), Expect = 2e-17 Identities = 141/194 (73%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 151913 CTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTCCCGGCG 151970 ||| |||||||||||||| || | | ||| | ||||| || || ||||| || ||| Sbjct 14288 CTCCTTTTGGATGTTGTAGTCAGAGAGAGTCCGACCATCCTCCAGCTGCTTT--CCCGCG 14345 Query 151971 AAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACA 152030 || || || | ||||||||| | | ||| || || || || ||||| || |||||| Sbjct 14346 AAAATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCTTTGTCCTGAATCTTGGACTTGACA 14405 Query 152031 GTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTC 152090 | || | |||| ||||| || ||||| || || || |||||||| || |||||| Sbjct 14406 TTGTCGATTGTGTCGCTGCTCTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTC 14465 Query 152091 ACGAAGACCTGCAT 152104 ||||||| |||||| Sbjct 14466 ACGAAGATCTGCAT 14479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153814724051781