Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12- 02] 411 sequences; 26,537,341 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq365 165 2e-35 seq64 161 2e-34 seq124 147 5e-30 seq222 96.9 7e-15 seq2 91.5 3e-13 >seq365 Length=144107 Score = 165 bits (182), Expect = 2e-35 Identities = 175/228 (77%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || || |||||||| | ||| || || || ||||||||||| | | Sbjct 48026 CCACCACGGAGACGGAGCACCAGATGCAGCGTAGACTCCTTCTGAATGTTGTAGTCGGAA 48085 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||| || |||||||| || || || || || || || | ||| || || || ||| Sbjct 48086 AGCGTCCGCCCATCCTCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGATCGGGGGGA 48145 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||| ||||| || ||| ||||| || ||| | ||||| |||||||| | ||||| Sbjct 48146 ATGCCCTCTTTGTCCTGAATC-TTGCTCTTGACGTTGTCGATCGTGTCCGACGACTCGAC 48204 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || |||||||||||||| ||||||| |||||| || || |||||||| Sbjct 48205 CTCAAGAGTGATCGTCTTGCCCGTCAGAGTCTTGACAAAGATCTGCAT 48252 Score = 158 bits (174), Expect = 3e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || |||||||| || || ||||| || | ||| || || |||||||||||||| | | Sbjct 47570 CCGCCACGCAGACGCAGCACCAGGTGCAGCGTTGACTCCTTCTGGATGTTGTAGTCCGAA 47629 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| || ||||| || || || || |||||||||| || || ||||| ||| Sbjct 47630 AGTGTGCGTCCGTCCTCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCTGGCGGG 47689 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| |||||||| | || || | || || || ||||| | || || Sbjct 47690 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCAATCGTATCCGAGGACTCCACC 47749 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || |||||||| || ||||| ||||| ||||| |||||||| Sbjct 47750 TCAAGCGTAATCGTCTTTCCTGTCAACGTCTTGACGAAGATCTGCAT 47796 Score = 152 bits (168), Expect = 1e-31 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || || || || || |||| || | ||| ||| || || ||||||||||| | Sbjct 47798 CCGCCGCGAAGACGCAGCACCAAGTGCAGCGTCGATTCCTTCTGAATGTTGTAGTCCGAC 47857 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| |||||||| ||||| || || |||||||||| ||| || ||||| ||| Sbjct 47858 AGGGTGCGCCCATCCTCCAGTTGCTTGCCTGCAAAGATCAGACGCTGCTGGTCTGGCGGG 47917 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||||||||||||||||||||||| || || | || || ||||| || | || || Sbjct 47918 ATACCCTCCTTGTCTTGGATCTTTGACTTCACATTGTCAATCGTGTCTGACGACTCCACC 47977 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | || |||||||| ||||| | ||||| || || |||||||| Sbjct 47978 TCCAACGTAATCGTCTTGCCCGTGAGCGTCTTCACAAAGATCTGCAT 48024 Score = 118 bits (130), Expect = 2e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || || || || | ||| || || ||||||||||| || | Sbjct 48253 ACCACCACGCAGACGCAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGA 48312 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||| || || ||||| || || || || || || || | || || || || || Sbjct 48313 TAGCGTCCGACCGTCCTCGAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGATCGGGGGG 48372 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 ||| ||||| ||||| || ||| ||||| || ||| | || || |||||||| | ||| | Sbjct 48373 AATGCCCTCTTTGTCCTGAATC-TTGCTCTTGACGTTGTCTATCGTGTCCGACGATTCAA 48431 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | || || ||||| ||||| || || | || || || || |||||||| Sbjct 48432 CCTCTAGTGTGATGGTCTTGCCGGTAAGCGTTTTGACAAAGATCTGCAT 48480 >seq64 Length=19946 Score = 161 bits (178), Expect = 2e-34 Identities = 174/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || ||||| ||||| || | |||||| || ||||||||||||||||||| Sbjct 14253 CCGCCACGGAGCCGAAGCACCAGGTGGAGCGTGCTCTCCTTTTGGATGTTGTAGTCAGAG 14312 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || || |||||||| || || || || || || |||| || || |||||| || Sbjct 14313 AGAGTCCGACCATCCTCCAGCTGCTTTCCCGCGAAAATCAGGCGCTGCTGGTCAGGGGGG 14372 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGAC 283051 || ||||| ||||| || ||||| | || || | ||||| |||| || ||| ||||| Sbjct 14373 ATGCCCTCTTTGTCCTGAATCTTGGACTTGACATTGTCGATTGTGT-CGCTGCTCTCGAC 14431 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| ||||||| ||||| ||||| |||||||| Sbjct 14432 CTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 14479 >seq124 Length=325275 Score = 147 bits (162), Expect = 5e-30 Identities = 164/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || ||||| || | || || || |||||||||||||| | Sbjct 289397 ACCACCACGCAGGCGGAGCACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 289456 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||| ||||| || || || || ||||| |||| || || ||||| ||| Sbjct 289457 CAGGGTCCGGCCGTCCTCGAGCTGCTTGCCAGCAAAAATCAGGCGCTGCTGGTCGGGCGG 289516 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| | || || | ||||| |||||||| | ||||| Sbjct 289517 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGAC 289576 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || | ||||| ||||| ||||| | ||||| ||||| Sbjct 289577 CTCCAAGGTGATGGTCTTGCCCGTAAGGGTCTTCACGAA 289615 >seq222 Length=676535 Score = 96.9 bits (106), Expect = 7e-15 Identities = 151/215 (70%), Gaps = 1/215 (0%) Strand=Plus/Plus Query 230191 AGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGG 230250 |||||||| | ||| || |||| ||| |||| |||||||||| | |||||| Sbjct 131907 AGGAGTTCCTGACCGAGGCGCTTCCCTGCGCTCTTCTCGGCATGAACTCCACCCTCATGA 131966 Query 230251 GGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGT 230310 |||||| || || ||||| || || || | | || || || || | || || |||| Sbjct 131967 AGCAATACATTGAGTTCGTTGCCGACCGCCTACTGGTTGCTCTTGGCAATGACAAGGTGT 132026 Query 230311 ATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACT 230370 | ||||| |||||||||| || |||||| ||| || || || || || |||| Sbjct 132027 ACCGCTCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGGTGGCAAGACCAACT 132086 Query 230371 TCTTCGAAAAGCGTGTCAGCGATTATCA-AAGGCC 230404 ||||||| ||||| ||| | || || || |||||| Sbjct 132087 TCTTCGAGAAGCGCGTCGGTGACTACCAGAAGGCC 132121 >seq2 Length=564189 Score = 91.5 bits (100), Expect = 3e-13 Identities = 125/175 (71%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 317027 TCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCAC 317086 ||||||| || || | ||| |||| || || | |||||| || |||||||| | || Sbjct 250230 TCGGGAAACCCTCGACCTGCTCGTTGTTGATGGCGCGCATCAGGGTGGACTTGCCGGAAC 250289 Query 317087 CATTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCA 317146 | ||||| ||||| ||||| || || | || |||||| | | ||| | ||||| Sbjct 250290 CGTTGGGACCGCACAGACCGTAGCGCTGGCCACGCTTCAGGCGCAGGCTGGTCTGGTTCA 250349 Query 317147 GAAGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201 | |||||||| |||| || || || |||||| || | |||||||||||||| Sbjct 250350 GCAGAATCTTGGCACCGTAGGCGAGCGAGAACGTGCAGTTGCACAGGTCCTCGCC 250404 Score = 86.0 bits (94), Expect = 1e-11 Identities = 122/169 (72%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 315666 CACCCCACCTCCGAAATTCTTAAGCGCCTCTGCCATGGCACCGAGACTCTCGCGGTCCAC 315725 ||| ||||| |||| ||||| ||||||| | || |||||||| || ||||||| Sbjct 248833 CACACCACCCTCGAACTTCTTCAGCGCCTTGGACAGCGCACCGAGCGAGTCACGGTCCAG 248892 Query 315726 AAAGTTGGTCGGCTCATCAAGAACGATGACGTGGGGTTGTTGCCATAGAGC-GGCGCCGA 315784 |||| |||||||| ||||||||||| | ||||| | ||||| |||| ||| ||| Sbjct 248893 GTAGTTTGTCGGCTCGTCAAGAACGATCAGATGGGGGCGCTGCCA-CGAGCAGGCCGCGA 248951 Query 315785 TAACGAGCTTTAGTTTTTGCCCACCAGACAGTCCACGGATGCGAGAATG 315833 |||| ||| | || ||||| ||||| || || ||||| || || Sbjct 248952 GCACGACCTTGACACGCTGGCCACCCGACAGACCGCGCATGCGCGAGTG 249000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046733687936794