Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12-
02] 411 sequences; 26,537,341 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq365 165 8e-36
seq64 156 4e-33
seq124 131 2e-25
>seq365
Length=144107
Score = 165 bits (182), Expect = 8e-36
Identities = 176/230 (77%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||||||||| ||||| | ||||| |||||||| |||||||||||||| ||||| ||
Sbjct 47797 GCCGCCGCGAAGACGCAGCACCAAGTGCAGCGTCGATTCCTTCTGAATGTTGTAGTCCGA 47856
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
||||||||| | || || || |||||||| || || ||||| ||||| ||||| | ||
Sbjct 47857 CAGGGTGCGCCCATCCTCCAGTTGCTTGCCTGCAAAGATCAGACGCTGCTGGTCTGGCGG 47916
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
| | ||||||||| ||| ||| |||| || | | | ||||| ||||||||
Sbjct 47917 GATACCCTCCTTGTCTTGGATCTTTGACTTC-ACATTGTCAATCGTGTCTGACGACTCCA 47975
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|||||| ||| ||||| || ||||| |||||||| || || |||||||||
Sbjct 47976 CCTCCAACGTAATCGTCTTGCCCGTGAGCGTCTTCACAAAGATCTGCATG 48025
Score = 158 bits (174), Expect = 1e-33
Identities = 176/230 (77%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || ||||| | ||||||||||||||| ||||||||||||||| ||||||||
Sbjct 48025 GCCACCACGGAGACGGAGCACCAGATGCAGCGTAGACTCCTTCTGAATGTTGTAGTCGGA 48084
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|| || ||| | || || ||||||||||| ||||| || || ||||| || || | |||
Sbjct 48085 AAGCGTCCGCCCATCCTCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGATCGGGGGG 48144
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCT-TCAACGACGAC-ACAGTGTCGCTCGACTCC 41812
|| || ||| |||||| ||| | ||||| | ||| | | | ||||| ||||||
Sbjct 48145 AATGCCCTCTTTGTCC-TGA-ATCTTGCTCTTGACGTTGTCGATCGTGTCCGACGACTCG 48202
Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||| | || ||||| || |||||||| ||||| || || ||||||||
Sbjct 48203 ACCTCAAGAGTGATCGTCTTGCCCGTCAGAGTCTTGACAAAGATCTGCAT 48252
Score = 150 bits (166), Expect = 2e-31
Identities = 173/230 (75%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
|||||| || ||||| | |||||| |||||||| ||||||||| ||||| ||||| ||
Sbjct 47569 GCCGCCACGCAGACGCAGCACCAGGTGCAGCGTTGACTCCTTCTGGATGTTGTAGTCCGA 47628
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|| ||||| |||| || ||||||||||| || || ||||| ||||| ||||| | ||
Sbjct 47629 AAGTGTGCGTCCGTCCTCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCTGGCGG 47688
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
| || |||||||||| ||| || ||| || | | | || || |||||||
Sbjct 47689 GATGCCCTCCTTGTCCTGGATCTTCGACTT-GACATTGTCAATCGTATCCGAGGACTCCA 47747
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|||| | ||| ||||| || || |||| |||||| ||||| |||||||||
Sbjct 47748 CCTCAAGCGTAATCGTCTTTCCTGTCAACGTCTTGACGAAGATCTGCATG 47797
Score = 122 bits (134), Expect = 8e-23
Identities = 168/230 (73%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | || || || ||||| ||||||||| ||||| || |||||
Sbjct 48254 CCACCACGCAGACGCAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGAT 48313
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || || |||| |||||||||||||| ||||| || |||||||| || || | ||||
Sbjct 48314 AGCGTCCGACCGTCCTCGAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGATCGGGGGGA 48373
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCT-TCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
| || ||| |||||| ||| | ||||| | ||| | | | ||||| ||| || |
Sbjct 48374 ATGCCCTCTTTGTCC-TGA-ATCTTGCTCTTGACGTTGTCTATCGTGTCCGACGATTCAA 48431
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|||| | || || || || || || ||||| || || || |||||||||
Sbjct 48432 CCTCTAGTGTGATGGTCTTGCCGGTAAGCGTTTTGACAAAGATCTGCATG 48481
>seq64
Length=19946
Score = 156 bits (172), Expect = 4e-33
Identities = 177/233 (76%), Gaps = 6/233 (3%)
Strand=Plus/Plus
Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693
||||||| || || || | |||||| || |||||||||||||| || ||||| ||||| |
Sbjct 14251 CGCCGCCACGGAGCCGAAGCACCAGGTGGAGCGTGCTCTCCTTTTGGATGTTGTAGTCAG 14310
Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753
|||| || || | || || |||||||| || ||||| ||||||||||| ||||| | ||
Sbjct 14311 AGAGAGTCCGACCATCCTCCAGCTGCTTTCCCGCGAAAATCAGGCGCTGCTGGTCAGGGG 14370
Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTG-CTT--CAACGACGACACAGTGTCGCTCGACT 41810
| | || ||| |||||| ||| | || | ||| || | || | |||||||| ||
Sbjct 14371 GGATGCCCTCTTTGTCC-TGAATCTTGGACTTGACATTGTCG--ATTGTGTCGCTGCTCT 14427
Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
| ||||| | || || || || |||||||| ||||| ||||| |||||||||
Sbjct 14428 CGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATG 14480
>seq124
Length=325275
Score = 131 bits (144), Expect = 2e-25
Identities = 162/220 (74%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | |||||| ||||| || ||||||||| ||||| ||||| ||
Sbjct 289398 CCACCACGCAGGCGGAGCACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAC 289457
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
||||| || |||| |||||||||||||| || || ||||||||||| ||||| | ||
Sbjct 289458 AGGGTCCGGCCGTCCTCGAGCTGCTTGCCAGCAAAAATCAGGCGCTGCTGGTCGGGCGGG 289517
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813
| || |||||||||| ||| || ||| || | || | ||||| ||||| |
Sbjct 289518 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG--ATCGTGTCCGAGGACTCGA 289575
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAA 41853
|||||| || || || || ||||| || ||||| |||||
Sbjct 289576 CCTCCAAGGTGATGGTCTTGCCCGTAAGGGTCTTCACGAA 289615
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462301624913200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |