Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12- 02] 411 sequences; 26,537,341 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq365 165 8e-36 seq64 156 4e-33 seq124 131 2e-25 >seq365 Length=144107 Score = 165 bits (182), Expect = 8e-36 Identities = 176/230 (77%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||||||||| ||||| | ||||| |||||||| |||||||||||||| ||||| || Sbjct 47797 GCCGCCGCGAAGACGCAGCACCAAGTGCAGCGTCGATTCCTTCTGAATGTTGTAGTCCGA 47856 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||||||||| | || || || |||||||| || || ||||| ||||| ||||| | || Sbjct 47857 CAGGGTGCGCCCATCCTCCAGTTGCTTGCCTGCAAAGATCAGACGCTGCTGGTCTGGCGG 47916 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | ||||||||| ||| ||| |||| || | | | ||||| |||||||| Sbjct 47917 GATACCCTCCTTGTCTTGGATCTTTGACTTC-ACATTGTCAATCGTGTCTGACGACTCCA 47975 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||||| ||| ||||| || ||||| |||||||| || || ||||||||| Sbjct 47976 CCTCCAACGTAATCGTCTTGCCCGTGAGCGTCTTCACAAAGATCTGCATG 48025 Score = 158 bits (174), Expect = 1e-33 Identities = 176/230 (77%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | ||||||||||||||| ||||||||||||||| |||||||| Sbjct 48025 GCCACCACGGAGACGGAGCACCAGATGCAGCGTAGACTCCTTCTGAATGTTGTAGTCGGA 48084 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || || ||| | || || ||||||||||| ||||| || || ||||| || || | ||| Sbjct 48085 AAGCGTCCGCCCATCCTCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGATCGGGGGG 48144 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCT-TCAACGACGAC-ACAGTGTCGCTCGACTCC 41812 || || ||| |||||| ||| | ||||| | ||| | | | ||||| |||||| Sbjct 48145 AATGCCCTCTTTGTCC-TGA-ATCTTGCTCTTGACGTTGTCGATCGTGTCCGACGACTCG 48202 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| | || ||||| || |||||||| ||||| || || |||||||| Sbjct 48203 ACCTCAAGAGTGATCGTCTTGCCCGTCAGAGTCTTGACAAAGATCTGCAT 48252 Score = 150 bits (166), Expect = 2e-31 Identities = 173/230 (75%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 |||||| || ||||| | |||||| |||||||| ||||||||| ||||| ||||| || Sbjct 47569 GCCGCCACGCAGACGCAGCACCAGGTGCAGCGTTGACTCCTTCTGGATGTTGTAGTCCGA 47628 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || ||||| |||| || ||||||||||| || || ||||| ||||| ||||| | || Sbjct 47629 AAGTGTGCGTCCGTCCTCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCTGGCGG 47688 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | || |||||||||| ||| || ||| || | | | || || ||||||| Sbjct 47689 GATGCCCTCCTTGTCCTGGATCTTCGACTT-GACATTGTCAATCGTATCCGAGGACTCCA 47747 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| | ||| ||||| || || |||| |||||| ||||| ||||||||| Sbjct 47748 CCTCAAGCGTAATCGTCTTTCCTGTCAACGTCTTGACGAAGATCTGCATG 47797 Score = 122 bits (134), Expect = 8e-23 Identities = 168/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || ||||| ||||||||| ||||| || ||||| Sbjct 48254 CCACCACGCAGACGCAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGAT 48313 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || |||| |||||||||||||| ||||| || |||||||| || || | |||| Sbjct 48314 AGCGTCCGACCGTCCTCGAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGATCGGGGGGA 48373 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCT-TCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | || ||| |||||| ||| | ||||| | ||| | | | ||||| ||| || | Sbjct 48374 ATGCCCTCTTTGTCC-TGA-ATCTTGCTCTTGACGTTGTCTATCGTGTCCGACGATTCAA 48431 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| | || || || || || || ||||| || || || ||||||||| Sbjct 48432 CCTCTAGTGTGATGGTCTTGCCGGTAAGCGTTTTGACAAAGATCTGCATG 48481 >seq64 Length=19946 Score = 156 bits (172), Expect = 4e-33 Identities = 177/233 (76%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 ||||||| || || || | |||||| || |||||||||||||| || ||||| ||||| | Sbjct 14251 CGCCGCCACGGAGCCGAAGCACCAGGTGGAGCGTGCTCTCCTTTTGGATGTTGTAGTCAG 14310 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753 |||| || || | || || |||||||| || ||||| ||||||||||| ||||| | || Sbjct 14311 AGAGAGTCCGACCATCCTCCAGCTGCTTTCCCGCGAAAATCAGGCGCTGCTGGTCAGGGG 14370 Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTG-CTT--CAACGACGACACAGTGTCGCTCGACT 41810 | | || ||| |||||| ||| | || | ||| || | || | |||||||| || Sbjct 14371 GGATGCCCTCTTTGTCC-TGAATCTTGGACTTGACATTGTCG--ATTGTGTCGCTGCTCT 14427 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 | ||||| | || || || || |||||||| ||||| ||||| ||||||||| Sbjct 14428 CGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATG 14480 >seq124 Length=325275 Score = 131 bits (144), Expect = 2e-25 Identities = 162/220 (74%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | |||||| ||||| || ||||||||| ||||| ||||| || Sbjct 289398 CCACCACGCAGGCGGAGCACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAC 289457 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || |||| |||||||||||||| || || ||||||||||| ||||| | || Sbjct 289458 AGGGTCCGGCCGTCCTCGAGCTGCTTGCCAGCAAAAATCAGGCGCTGCTGGTCGGGCGGG 289517 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813 | || |||||||||| ||| || ||| || | || | ||||| ||||| | Sbjct 289518 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG--ATCGTGTCCGAGGACTCGA 289575 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAA 41853 |||||| || || || || ||||| || ||||| ||||| Sbjct 289576 CCTCCAAGGTGATGGTCTTGCCCGTAAGGGTCTTCACGAA 289615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462301624913200