Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12- 22] 2,687 sequences; 28,556,450 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq2494 147 3e-30 seq2400 89.7 6e-13 >seq2494 Length=11727 Score = 147 bits (162), Expect = 3e-30 Identities = 469/719 (65%), Gaps = 20/719 (3%) Strand=Plus/Minus Query 53951 TCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 54010 ||||||||||| || | || | ||| || ||||| || | || ||||||| || | Sbjct 2268 TCAAACTCGTCGCCGTAGACGTCCGCCAGACCGGGACACTCGTTGGGGCACATCAGCGTC 2209 Query 54011 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 54070 ||||| |||| | || || || ||||| || |||||||| ||||| || || | || Sbjct 2208 CACTCGCCGTTCTTCTCAACCCGCTTCATGAACAGATCAGGGATCCAGAGCGCCAGGAAC 2149 Query 54071 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTT---AAGATCGAGGAACGCC 54127 ||||| | | | | ||||| || || || ||||| || || |||||| | Sbjct 2148 AGATCGCGAGCACGAATCTCCTCCTTGCC---ATGGTTTTTGCGCAGGTCAAGGAACTCA 2092 Query 54128 ATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCT 54187 | | ||||| |||||| || || | ||| ||| | | | || || || |||||||| Sbjct 2091 AAGACATCAGCATGCCAAGGCTCTAGGTAGATGCAGAAAGCGCCCGGGCGCTTGTTTCCG 2032 Query 54188 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTG 54247 ||||| || | || | ||| ||||| || || || | | ||| || || || |||||| Sbjct 2031 CCCTGGTCCACATAGCGAGCCGTGTTGTTGTAGACACGGAGCATAGGGATGATGCCATTG 1972 Query 54248 GATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATA--TTACTAATTGATA 54305 || | || || || |||| || ||| || | || || ||| | ||| | Sbjct 1971 GACGTGCCGTTTGTGCCGGCAATGTAGGAGCCGGTAGCCCGGATACGGTGGACGTTG--A 1914 Query 54306 GACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGC 54365 | || || || || ||| | || ||||| | || || || | || |||||||| | Sbjct 1913 GGCCAATGCCACCAGCCGTCTTGGAGATCATGGCACAGGTCTTGAGGGTGTCATAGATAC 1854 Query 54366 CCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAG 54425 |||| || || |||||| | |||| | || || ||| ||||||||| | | Sbjct 1853 CCTCAATGCTGTCATCCTTTATGTCCACAAGGAAGCAGGATGACATTTGGGCCTGTGGTG 1794 Query 54426 TTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTT-TTCAGAAAGTAGATTG 54484 | || || || || | || || || || ||||| || |||| ||| | |||| ||| Sbjct 1793 TGCCGGCGTTGAAGAGTGTCGGCGAGGCATGCGTGAAGAATTTGTTCGACATGTAG-TTG 1735 Query 54485 TACGTCTCGATAGCTGAGTCTA---TATC-CCATTGATGAATTCCTACTGCGACACGCAT 54540 || ||||| | | || | |||| || |||| || ||||| || ||||| Sbjct 1734 TATGTCTCAACCACACGCTCCACATTATCACCCCAGATG----CCAACTGCCACGCGCAT 1679 Query 54541 TAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTC 54600 | ||||||||| || | || || |||||| | | || || | ||| || || Sbjct 1678 AATCATGTGCTGCGGCCGCTCGACAATCTTGCCATCGAGCTTGAGTAGGTAAGACCGCTC 1619 Query 54601 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGT 54659 || || || ||||||||||| | ||| ||||| || ||||| | ||| | |||| Sbjct 1618 CAGTGTCTTGAAACCAAAATATTGGTAGTTGAAGTCGCGGTCGTAGACAATGGCCGAGT 1560 >seq2400 Length=47555 Score = 89.7 bits (98), Expect = 6e-13 Identities = 151/218 (69%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 24126 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 24185 |||| || || ||||| ||| ||| || |||||||| | | ||| | |||||||| Sbjct 7658 AACAGCAGGCAAGCGAAGTCGGTGTGCAGGCCCTCGTCACGAGAAATAAGCTCGTTGGAG 7599 Query 24186 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 24245 || || || || ||||| ||||| ||||| || ||||| || ||||| | || | || Sbjct 7598 AAGGTCAGGCCAGGCATCAGGCCGCGCTTCTTCAGCCAGAAGATGGAAGAGAAGGCACCG 7539 Query 24246 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGG---CG 24302 ||||| || || || || || ||||| || | || | | || | || || Sbjct 7538 CTGAAGAAGATGCCCTCCACAGCGGCAAAAGCGACCAGGCGCTGAGCAAAGGTGGACTCG 7479 Query 24303 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 24340 | ||| |||||||| ||||||||||||||||||| Sbjct 7478 CGGTCTGAGATCCACTTGAGAGCCCAATCGGCCTTCTT 7441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593701658375760