Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12- 22] 2,687 sequences; 28,556,450 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq556 95.1 1e-14 seq388 93.3 5e-14 >seq556 Length=72248 Score = 95.1 bits (104), Expect = 1e-14 Identities = 133/183 (73%), Gaps = 8/183 (4%) Strand=Plus/Plus Query 151012 GTCTTCATGGGCCCCATCTACTACCTGCGGCTGCGGCACCTCACGCAGGACAAGG-CCAC 151070 |||||| | ||||||| ||||||| ||||||||| ||| | | |||||| |||| Sbjct 36465 GTCTTCTTCGGCCCCACGTACTACCAGCGGCTGCGCCACATGGTCGACGACAAGATCCAC 36524 Query 151071 GGTGCGCTGCCGCGG---CAAGAAGACCAAGCTGATCCGGCAGGCCAACGAGGGCCGCAA 151127 | ||| |||||| | | ||| || ||| |||||| | |||||| ||| Sbjct 36525 GCC-CGCGCCCGCGGACCCGTGCAGATCA---TGACGCGGCAGCCGGTCGAGGGTCGCGC 36580 Query 151128 GCGAGGCGGCGGCATCAAGTTCGGCGAGATGGAGCGCGACTGCCTCATCGCGCACGGCGC 151187 || | |||||| | |||||||||||||||||||||||| | |||||||||||||| Sbjct 36581 CCGCGATGGCGGCCTGCGTTTCGGCGAGATGGAGCGCGACTGCATGATCGCGCACGGCGC 36640 Query 151188 GGC 151190 ||| Sbjct 36641 GGC 36643 >seq388 Length=5549 Score = 93.3 bits (102), Expect = 5e-14 Identities = 146/209 (70%), Gaps = 14/209 (7%) Strand=Plus/Minus Query 150987 GACGGACGAGCCCTACGCGGCCGCCGTCTTCATGGGCCCCATCTACTACCTGCGGCTGCG 151046 ||||| |||||| | ||| | |||||| || ||||||||||||| ||| || Sbjct 2267 GACGGGCGAGCCGATGGAGGCGCACATCTTCAACGGTCCCATCTACTACCAGCGCCTCAA 2208 Query 151047 GCACCTCACGCAGGACAAGGCCACGGTGCGCTGCCGCGGCAAGAAGACCAAGC------- 151099 |||| | |||||||||| ||| || |||| ||| | || || Sbjct 2207 GCACATGGTGCAGGACAAGA------TGCACTCGCGCGCAAAGG-GCCCGCGCGCCATCT 2155 Query 151100 TGATCCGGCAGGCCAACGAGGGCCGCAAGCGAGGCGGCGGCATCAAGTTCGGCGAGATGG 151159 ||| |||||| | | |||||||||| ||| | ||||||| | | | |||||||||| Sbjct 2154 TGACGCGGCAGCCGACCGAGGGCCGCTCGCGCGACGGCGGCCTGCGGCTGGGCGAGATGG 2095 Query 151160 AGCGCGACTGCCTCATCGCGCACGGCGCG 151188 ||||||||||||||||||| |||||||| Sbjct 2094 AGCGCGACTGCCTCATCGCCTACGGCGCG 2066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608776352037480