Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12-
22] 2,687 sequences; 28,556,450 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq2400 197 1e-45
seq2379 152 5e-32
seq1979 123 3e-23
seq1920 118 1e-21
>seq2400
Length=47555
Score = 197 bits (218), Expect = 1e-45
Identities = 215/285 (75%), Gaps = 3/285 (1%)
Strand=Plus/Plus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| ||| |||||| ||||||||||| | |||||| | |||||
Sbjct 7034 ATCTGGCAAATGTACAAGAAGCACGAGGCTTCGTTCTGGACTGCTGAGGAGATCGACCTC 7093
Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752
|||||||| | ||||||| | ||| ||||||| | |||||| ||| || |
Sbjct 7094 TCCAAGGATCTGCACGACTGGAACAACCGCCTGAACGATGATGAGCGCTTCTTCGTCTCG 7153
Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812
||| | ||||| || || |||||| ||||||||||||||||||||| || || |||||
Sbjct 7154 CACATCCTGGCGTTCTTTGCCGCCTCCGACGGCATCGTCAACGAGAACCTAGTTGAGCGC 7213
Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872
||| | ||||| |||||| | ||||| || ||||| |||||||| |||||| |||
Sbjct 7214 TTCAGTGCTGAGGTCCAGGTGCCGGAGGCTCGCTGCTTTTACGGCTTCCAGATCATGATG 7273
Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917
|||||||| ||||| || | || || ||||||||||| |||
Sbjct 7274 GAGAACGTCCACTCCGAGACATACTCCCTGCTCATCGACACCTAC 7318
Score = 172 bits (190), Expect = 6e-38
Identities = 270/384 (70%), Gaps = 2/384 (1%)
Strand=Plus/Plus
Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041
|||||||||| ||||| || |||||| | | | | ||| || |||| | ||||||
Sbjct 7442 AGAAGGCCGATTGGGCTCTCAAGTGGATCTCAGACCGCGAGTCCACCTTTGCTCAGCGCC 7501
Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101
|||| || || || || || |||||| ||||||| || ||| | |||| || |
Sbjct 7502 TGGTCGCTTTTGCCGCTGTGGAGGGCATCTTCTTCAGCGGTGCCTTCTCTTCCATCTTCT 7561
Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161
|||| ||||| |||||||| ||||| |||||||| ||| ||||||||| || || | |
Sbjct 7562 GGCTGAAGAAGCGCGGCCTGATGCCTGGCCTGACCTTCTCCAACGAGCTTATTTCTCGTG 7621
Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA 117221
||||||| ||||| |||||| || || |||||||| ||| || | | || || |
Sbjct 7622 ACGAGGGCCTGCACACCGACTTCGCTTGCCTGCTGTTCTCTCATCTGAAGAACCGCCCCA 7681
Query 117222 GCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCA 117281
|| || | || |||||| || ||| || ||| || |||||| |||||||
Sbjct 7682 GCAAGGAGATGATCCAGGAGATAATCGTCGATGCTGTCAAGATTGAGCAGGAGTTCCTCA 7741
Query 117282 CCGAAGCGCTGCCGGTGCG-TCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATC 117340
|||| || || || |||| |||||| || | || | | | ||| ||| |||||
Sbjct 7742 CCGAGGCCCTTCC-CTGCGCTCTGCTCGGCATGAACTCCACACTCATGAAGCAGTACATT 7800
Query 117341 GAGTTCGTCGCCGACAGGCTGCTG 117364
|||||||| |||||| | || |||
Sbjct 7801 GAGTTCGTTGCCGACCGCCTTCTG 7824
>seq2379
Length=13478
Score = 152 bits (168), Expect = 5e-32
Identities = 172/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || ||||| ||||| ||||||||| |||| ||||| | |
Sbjct 4785 ATGCAGATTTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTCGAGTCTTCT 4726
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | | | |||| ||||| || |||| ||||| |||||||||||| |||| ||
Sbjct 4725 GATACCATCGACAACG-TCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCGGATCA 4667
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || || || | || || || ||||| || |||| ||||| ||| ||| |||||
Sbjct 4666 GCAGCGTCTGATTTTTGCCGGAAAGCAGCTCGAGGACGGCCGCACGCTCTCCGATTACAA 4607
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
||||||||||||| |||| |||||||| || |||| || | |||||
Sbjct 4606 CATCCAGAAGGAGTCCACCCTGCATCTCGTCCTGCGTCTGCGTGGCGG 4559
Score = 131 bits (144), Expect = 2e-25
Identities = 168/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || ||||| || || || || || ||| | || || || | |
Sbjct 4101 ATGCAGATTTTCGTCAAGACGCTGACAGGGAAGACGATTACCTTGGAGGTTGAGTCATCA 4042
Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | || |||| | ||| || |||| ||||| |||||||| ||| | |||||
Sbjct 4041 GATACGATTGACAACG-TGAAGTCGAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCA 3983
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || ||||| | |||||||| |||||||| |||| ||||||||| ||||||||
Sbjct 3982 GCAGCGGCTCATTTTTGCGGGCAAGCAGCTGGAGGACGGCCGCACCCTCTCGGACTACAA 3923
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
||||||||||| | |||||||| || ||| | || || | ||||||
Sbjct 3922 TATCCAGAAGGAATCGACGCTGCACCTGGTGCTTCGTCTGCGTGGCGGC 3874
Score = 125 bits (138), Expect = 7e-24
Identities = 159/216 (74%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || |||||||| ||||| |||||||| || |||||| | || || || | |
Sbjct 4329 ATGCAGATTTTCGTAAAGACGCTTACGGGCAAGACGATCACCCTGGAGGTGGAGTCGTCG 4270
Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | || || | | ||| ||||| | ||||| ||||||||||| | |||||
Sbjct 4269 GACACGATTGACAATG-TGAAGTCTAAAATCCAGGACAAGGAGGGCATCCCGCCAGACCA 4211
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || || |||| ||| ||||| ||| |||| || | ||||| || ||||||||
Sbjct 4210 GCAGCGCCTTATCTTCGCTGGCAAGCAGTTGGAGGATGGCCGCACGCTATCGGACTACAA 4151
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
|||||||||||| | || || || || ||| ||||
Sbjct 4150 CATCCAGAAGGAATCGACTCTTCACCTGGTGCTGCG 4115
Score = 125 bits (138), Expect = 7e-24
Identities = 159/216 (74%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || ||||| || ||||| |||||||| | || ||||| | |
Sbjct 4557 ATGCAGATCTTCGTCAAGACGCTGACTGGCAAGACCATCACTCTGGAGGTCGAGTCGTCG 4498
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| ||||| || || | ||||| ||||| ||||| | |||||
Sbjct 4497 GACACCATCGATAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCACCCGACCA 4439
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || || || | ||| ||||| ||||| || || | || ||||| ||||||||
Sbjct 4438 GCAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAGGATGGACGGACCCTTTCGGACTACAA 4379
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
||| ||||||||| | |||||||| || ||| ||||
Sbjct 4378 CATTCAGAAGGAGTCGACGCTGCACCTGGTGCTGCG 4343
>seq1979
Length=23555
Score = 123 bits (136), Expect = 3e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758
||||| || || || |||||||| ||||||||| | || ||||| || | |||| |
Sbjct 2992 TTCGTGAAGACCCTTACGGGCAAGACCATCACCTTGGAGGTCGAGTCCTCGGACACGATC 2933
Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818
| | ||||| || || | ||||| ||||||||||| | |||||||| || ||
Sbjct 2932 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCAGCAGCGCCTG 2873
Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878
|||| || ||||| ||||| || |||| || ||||| |||||||| |||||||||
Sbjct 2872 ATCTTTGCTGGCAAGCAGCTCGAGGACGGCCGTACCCTGTCTGACTACAATATCCAGAAG 2813
Query 40879 GAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
||| | || ||||| || ||| | ||| || | || ||
Sbjct 2812 GAGTCGACTCTGCACCTGGTGCTCCGCCTGCGTGGTGG 2775
>seq1920
Length=25525
Score = 118 bits (130), Expect = 1e-21
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| ||||| |||||||| || || || ||| | || ||||| || |
Sbjct 16945 ATGCAGATCTTCGTGAAAACCCTCACGGGTAAGACAATTACCCTTGAGGTCGAGAGCAGC 16886
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | ||||| || || | ||||| ||||||||||| | ||||||
Sbjct 16885 GACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAG 16826
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || | |||| ||| ||||| ||||| || || | || || ||| ||| ||||||
Sbjct 16825 CAGCGCTTGATCTTCGCCGGCAAGCAGCTAGAAGATGGACGGACTCTCTCCGATTACAAC 16766
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
|||||||||||| ||| || || || |||
Sbjct 16765 ATCCAGAAGGAGAGCACTCTCCACCTGGTG 16736
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515201895075120
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