Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12-
22] 2,687 sequences; 28,556,450 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq2379 138 7e-28
seq1979 125 5e-24
seq1920 118 7e-22
>seq2379
Length=13478
Score = 138 bits (152), Expect = 7e-28
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || || |||| |||||||||||| | ||| ||| ||||| ||||||||||| ||
Sbjct 4103 CCACCACGGAGCCGCAGCACCAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAGTCCGAT 4162
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGGG 34281
||| ||| | || |||||||||||||| ||||| || || ||||||||||| | ||||
Sbjct 4163 AGCGTGCGGCCATCCTCCAACTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCTGGCGGG 4222
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341
| || ||||||||| || || ||| | || | | |||| || | ||| || ||
Sbjct 4223 -ATGCCCTCCTTGTCCTGGATTTTAGACTTCACATTGTCAATCGTGTCCGACGACTCCAC 4281
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| ||||| || ||||| || || || || || || ||||||||
Sbjct 4282 CTCCAGGGTGATCGTCTTGCCCGTAAGCGTCTTTACGAAAATCTGCAT 4329
Score = 125 bits (138), Expect = 5e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
||||| ||||| | ||||||||||| | || ||| ||||| || |||||||| ||
Sbjct 3875 CCGCCACGCAGACGAAGCACCAGGTGCAGCGTCGATTCCTTCTGGATATTGTAGTCCGAG 3934
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| |||| |||| ||||||||| || |||||||||||||||||||| |||
Sbjct 3935 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCCGCAAAAATGAGCCGCTGCTGGTCTGGGGGA 3994
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||||||| ||||| ||| | | | | |||| ||| | || || ||
Sbjct 3995 ATGCCCTCCTTGTCCTGAATCTTCGACTTCACGTTGTCAATCGTATCTGATGACTCAACC 4054
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| || || || || || || || || || || || ||||||||
Sbjct 4055 TCCAAGGTAATCGTCTTCCCTGTCAGCGTCTTGACGAAAATCTGCAT 4101
Score = 122 bits (134), Expect = 6e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| ||||| |||| |||||||||||| | || || ||||| ||||||||||| ||
Sbjct 4331 CCACCGCGGAGCCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCCGAA 4390
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| || | || || | ||||||||| |||||||| || |||||||||||| ||
Sbjct 4391 AGGGTCCGTCCATCCTCAAGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCGGGTGGG 4450
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | ||||||||| ||||| ||| | | | || | || | ||| |||||
Sbjct 4451 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTATCGATGGTGTCCGACGACTCGACC 4510
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| |||||||| ||||| || || || || || |||||||||||
Sbjct 4511 TCCAGAGTGATGGTCTTGCCAGTCAGCGTCTTGACGAAGATCTGCAT 4557
>seq1979
Length=23555
Score = 125 bits (138), Expect = 5e-24
Identities = 159/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || ||||| | ||||||||||| | ||| || ||||| || |||||||| |||
Sbjct 2775 CCACCACGCAGGCGGAGCACCAGGTGCAGAGTCGACTCCTTCTGGATATTGTAGTCAGAC 2834
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| |||| |||| || | ||||||||| || || || || |||||||||||| ||
Sbjct 2835 AGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCGGGCGGG 2894
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||||||| ||||| ||| | || | | |||| || | || |||||
Sbjct 2895 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACC 2954
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAG 34381
|||| |||||||| ||||| || || || ||||| |||
Sbjct 2955 TCCAAGGTGATGGTCTTGCCCGTAAGGGTCTTCACGAAG 2993
>seq1920
Length=25525
Score = 118 bits (130), Expect = 7e-22
Identities = 167/232 (72%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || || |||| ||||||||||| | ||| || || ||||| |||||||| |||||
Sbjct 16719 CCACCACGGAGCCGTAGCACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAATCGGAG 16778
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGGG 34281
|| || | || || | ||||||||| ||||| || | ||||||||||| | ||||
Sbjct 16779 AGAGTCCGTCCATCTTCTAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGCGGG 16838
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341
| || ||||||||| ||||| ||| | || | | || | ||| | |||||
Sbjct 16839 -ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGCTGCTCTCGAC 16897
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGCT 34393
|| | || || || || || ||||| |||||||| ||||||||||| |||
Sbjct 16898 CTCAAGGGTAATTGTCTTACCCGTGAGGGTTTTCACGAAGATCTGCATGGCT 16949
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323061420098720
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