Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12-
22] 2,687 sequences; 28,556,450 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq1920 113 4e-20
seq2379 111 1e-19
>seq1920
Length=25525
Score = 113 bits (124), Expect = 4e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| ||| || |||||||||||||| |||||||| ||| || || | || ||
Sbjct 16737 ACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAATCGGAGAGAGTCCGTCCATCTTCT 16796
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || |||||||| ||||| ||||| ||||| || || | ||||||||||||
Sbjct 16797 AGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGG 16856
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | |||| | | ||| ||||| | |||||| |||||
Sbjct 16857 ATCTTGGACTTGACATTGTCGATAGTGTCGCTGCTCTCGACCTCAAGGGTAATTGTCTTA 16916
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
||||| || || ||||| ||||| ||||||
Sbjct 16917 CCCGTGAGGGTTTTCACGAAGATCTGCATG 16946
>seq2379
Length=13478
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| ||||||||| ||||||||||||||||||||| || || | || ||
Sbjct 4349 ACCAGGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCCGAAAGGGTCCGTCCATCCTCA 4408
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || || ||||| |||| ||||| |||||||| || | |||||||||||||
Sbjct 4409 AGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCGGGTGGGATACCCTCCTTGTCCTGG 4468
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | ||||| ||| ||||||| || || ||||||
Sbjct 4469 ATCTTGGACTTGACGTTATCGATGGTGTCCGACGACTCGACCTCCAGAGTGATGGTCTTG 4528
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| ||||| ||||| || ||||| |||||
Sbjct 4529 CCAGTCAGCGTCTTGACGAAGATCTGCAT 4557
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| ||| || || |||||||| ||||||||||| || ||| | || |||
Sbjct 4121 ACCAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAGTCCGATAGCGTGCGGCCATCCTCC 4180
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
| || || || ||||| || | ||||| ||||| || || | ||||||||||||
Sbjct 4181 AACTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGG 4240
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
||||| ||| || | | ||||| ||||||||||| ||| |||||||||
Sbjct 4241 ATTTTAGACTTCACATTGTCAATCGTGTCCGACGACTCCACCTCCAGGGTGATCGTCTTG 4300
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
||||| || ||||| || || || ||||||
Sbjct 4301 CCCGTAAGCGTCTTTACGAAAATCTGCATG 4330
Score = 95.1 bits (104), Expect = 1e-14
Identities = 145/207 (70%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193
||||| ||| ||||||||| |||||||| ||| || ||| |||| || || ||
Sbjct 4583 TGCAGGGTGGACTCCTTCTGGATGTTGTAATCGGAGAGCGTGCGGCCGTCCTCGAGCTGC 4642
Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253
|||||||| || |||| ||||| || || || || | |||||||||||| ||| ||
Sbjct 4643 TTTCCGGCAAAAATCAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGAATCTTG 4702
Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313
||| || | | | | || | ||| ||||| | ||| || |||||||| ||
Sbjct 4703 GACTTGACGTTGTCGATGGTATCAGAAGACTCGACCTCGAGGGTGATGGTCTTGCCTGTG 4762
Query 45314 AGAGTCTTCACAAAGATTTGCATGTTG 45340
|| ||||| || || || |||||| ||
Sbjct 4763 AGGGTCTTGACGAAAATCTGCATGATG 4789
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395062262151427
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |