Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12- 22] 2,687 sequences; 28,556,450 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq2494 363 1e-95 seq2400 131 1e-25 seq2379 129 5e-25 seq1979 95.1 1e-14 >seq2494 Length=11727 Score = 363 bits (402), Expect = 1e-95 Identities = 1226/1888 (65%), Gaps = 38/1888 (2%) Strand=Plus/Minus Query 22105 CTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCC 22164 || ||| || || ||||| |||| | ||||| | | ||||| || || ||||| || Sbjct 3430 CTGGTCGACCGTGAACTGGATGGGCTGGGCGGCTGCCTGCGTGCGCAGGTAGTACATTCC 3371 Query 22165 CGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGG 22224 ||||||||| |||| |||||| || || || || || | || || | || Sbjct 3370 CGTCTTCAGGCCCAGCTTCCAGCCGGTGAAGTGCATGCTTGTGATCTTGCCCATGGTGGG 3311 Query 22225 CAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGC 22284 | ||||| | |||| |||||| ||| ||||| ||||| || || ||||| || Sbjct 3310 CTCACGCATGTGAATGTTGAGCGACTGCGACTGGTCGATGAACGCGCCACGGTCGGCCGC 3251 Query 22285 CATATTTATCAAT-GTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCT 22343 ||| | | |||| || ||| ||| || ||||| |||||||||||||| | |||| | Sbjct 3250 CATCTGCA-CAATCGTGCGCTGCGAGATCTCCCAAACGGTCTTGTACAGAGCCTTGATGT 3192 Query 22344 CTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAA 22403 | ||| || ||| |||||| || ||| | | ||||| || || | Sbjct 3191 CGGCCGGGATGTTGGGGATGTTCTGGATCGAACCGCCCTCGGCAATGATGCGGTTCTTCA 3132 Query 22404 TCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTT 22463 | | || ||||| || || | | ||| || | ||| |||| || || | Sbjct 3131 TGTTGTCCGACCACAGCCCCATATCAACGAGATCCTTCAGCAGCCACGGGTTGACAACCT 3072 Query 22464 GAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATT 22523 |||||||||| | || || ||||| ||| |||||||| ||| |||| ||||| ||| Sbjct 3071 GAAACTCGCCCGCCAGCACACGGCGCGAGTAGATGTTGGACGTGTACGGCTCGAAGCATT 3012 Query 22524 CATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGT 22583 | ||||| ||||| ||||| | ||||| || || ||||| || |||| || || || Sbjct 3011 CGTTGTTGCCCAGGATCTGCGACGTCGACGCTGTTGGCATGGGGGCCACCAACAGACTGT 2952 Query 22584 TTCTCAAGCCGTGCT--TTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGA 22641 | | | |||||||| |||| || | | |||| |||||||||||| || || Sbjct 2951 TGCGGACGCCGTGCTCCTTGATCTTC-AGACG-GAGCGAGTCCCAGTCCCACAGGTCAGA 2894 Query 22642 CGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTTC 22701 |||| |||| ||||||||| ||| |||| | || || | | || ||| || Sbjct 2893 CGGCTTCAC---GTCCCACATGTCGGGCTGCAGAATTCCCTGAGACACAGGAGAGCCCTC 2837 Query 22702 GTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTA 22761 ||||| | || | || | ||| ||| || ||||| ||| | ||| ||| Sbjct 2836 ATACGTCGCATAGGTGCCCTCAATCTGGGCCAGGTCGCACGACGCAGTGAGAGCGGCGTG 2777 Query 22762 ATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGC----GGCGACGCTTTCGTACG 22817 || || ||||| ||||||| |||||| | || || |||||| || | | Sbjct 2776 GTAGATGGTCTCAAAGATTTGCTTGTTGAGCTCCCGTGCCTCGGGCGAC----TCAAAGG 2721 Query 22818 GCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGT 22877 |||| |||| | || ||| || || |||| ||||| || || | ||| || || |||| Sbjct 2720 GCATGCGCAGCGCCAGGAAAGCATCTGCCAGCCCCTGCACACCCAAACCAATAGGACGGT 2661 Query 22878 TTTTCAGATTCGACACTTTT--GCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCT 22935 || || | || | ||||| |||| || || | || ||| || | | Sbjct 2660 GGCGCATGTTG--CTGTTCTCGGCCTCCGGCACGGGGTAGTAGTTGACATCAATGATGCG 2603 Query 22936 GTTCAAGTTTCTGGTCA--CAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACG 22993 ||||| ||| | || || || | | | | | |||||||| || Sbjct 2602 GTTCAGGTTGC-GGACAAGCAGCTGT-GCAACCTCGTGGAGCTTCTTGAAGTCGTA--CG 2547 Query 22994 CC-CGAT--TGTA--CAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCA 23048 | || | |||| ||||||| | || | || || || ||||| || || | Sbjct 2546 TCTCGTTGTTGTAGTCAACAAAAGACGGCAGTGCTAGGGAAGCTAGGTTGCACACAGCAA 2487 Query 23049 CCTCGTCTT-TGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTG 23107 |||| || || || ||||||| ||||| || || || | ||| | || ||| Sbjct 2486 CCTCATCCGGTGCAC-TGTACTCCACAATCTCCGTGCACAAGTTGGAGCTGCGGATGGTG 2428 Query 23108 CCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTG 23167 || | || |||||||||| || || || || ||||||||||||||| |||| || Sbjct 2427 CCTAGGTTCTTCTGGTTGCTCTTGCGGTTACAGTGGTCCTTGTAGAGCATGAACGGATTG 2368 Query 23168 CCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGC 23227 |||||||| ||| | ||||| | || ||| | |||| || | || | | Sbjct 2367 CCCGTCTCCGTCTGAGCCTCGAGAACTGCGTACCAGAGCTTCTGGGCCTTGAC-CTTTTT 2309 Query 23228 ACGTACCTG-CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACA 23286 || | | ||||| ||||||||| | |||| || ||||| ||| | ||||| Sbjct 2308 GCGGCCACGACCTTCGCGCTCGTACTTCTCATACAGGGCCTCAAACTCGTCGCCGTAGAC 2249 Query 23287 GTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAAC 23346 ||| ||||| ||||| | | | || ||||| || ||||| || || ||||| Sbjct 2248 GTCCGCCAGACCGGGACACTCGTTGGGGCACATCAGCGTCCACTCGCCGTTCTTCTCAAC 2189 Query 23347 GCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTC 23406 || |||| || ||||| || ||||| || || |||||| ||||| || || | ||| Sbjct 2188 CCGCTTCATGAACAGATCAGGGATCCAGAGCGCCAGGAACAGATCGCGAGCACGAATCTC 2129 Query 23407 CTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTC 23466 ||| ||||| ||| || || || | || || || || || |||||||| ||||| Sbjct 2128 CTCCTTGCCATGGTTTTTGCGCAGGTCAAGGAACTCAAAGACATCAGCATGCCAAGGCTC 2069 Query 23467 GAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGT 23526 ||||| | | || |||||||| | ||| || |||||||| || || || || ||||| Sbjct 2068 TAGGTAGATGCAGAAAGCGCCCGGGCGCTTGTTTCCGCCCTGGTCCACATAGCGAGCCGT 2009 Query 23527 GTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCAC 23586 ||||||||| || | ||||| || | || || ||||||| |||| | ||| || | Sbjct 2008 GTTGTTGTAGACACGGAGCATAGGGATGATGCCATTGGACGTGCCGTTTGTGCCGGCAAT 1949 Query 23587 ACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGA 23646 || || | || || | ||| |||| || || ||||| || ||| || || Sbjct 1948 GTAGGAGCCGGTAGCCCGGATACGGTGGACGTTGAGGCCAATGCCACCAGCCGTCTTGGA 1889 Query 23647 TATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGC 23706 ||||| || || || || ||||| ||||| ||||| |||||||| || || | | Sbjct 1888 GATCATGGCACAGGTCTTGAGGGTGTCATAGATACCCTCAATGCTGTCATCCTTTATGTC 1829 Query 23707 GACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCT 23766 || | ||| || || |||||||| || | || || |||| ||| |||||||| Sbjct 1828 CACAAGGAAGCAGGATGACATTTGGGCCTGTGGTGTGCCGGCGTTGAAGAGTGTCGGCGA 1769 Query 23767 GGCGTGCGTAAAGTATCCATTCGACAT-TAGATTGTACGTGTCGATGGCGGCATCAATGT 23825 ||| ||||| ||| || |||||||| ||| ||||| || || | | || | | Sbjct 1768 GGCATGCGTGAAGAATTTGTTCGACATGTAG-TTGTATGTCTCAACCACACGCTCCACAT 1710 Query 23826 CCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGA 23885 || || || || | || |||||||| ||||||| || || | |||||| | Sbjct 1709 TATCACCCCAGATGCCAACTGCCACGCGCATAATCATGTGCTGCGGCCGCTCGACAATCT 1650 Query 23886 CGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGT 23945 ||| | | |||| || || || || | || || || || |||||||| | |||| Sbjct 1649 TGCCATCGAGCTTGAGTAGGTAAGACCGCTCCAGTGTCTTGAAACCAAAATATTGGTAGT 1590 Query 23946 TAAAGTCACGATCGTGCACTATGGCCGA 23973 | ||||| || |||| || |||||||| Sbjct 1589 TGAAGTCGCGGTCGTAGACAATGGCCGA 1562 >seq2400 Length=47555 Score = 131 bits (144), Expect = 1e-25 Identities = 266/390 (68%), Gaps = 10/390 (3%) Strand=Plus/Plus Query 57914 CAAGAAGGCAGAGTGGTCAATCAAATGGATAAAA-AGCGCCACGGCCACGTTCGCCGAGA 57972 ||||||||| || ||| | |||| ||||| | | ||| | | |||| || || || Sbjct 7440 CAAGAAGGCCGATTGGGCTCTCAAGTGGATCTCAGACCGCGA-GTCCACCTTTGCTCAGC 7498 Query 57973 GGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATAT 58032 | || |||| || ||||| || || || || ||||| || ||| | | || | Sbjct 7499 GCCTGGTCGCTTTTGCCGCTGTGGAGGGCATCTTCTTCAGCGGTGCCTTCTCTTCCATCT 7558 Query 58033 TTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGC 58092 | ||| ||||||| |||||||||||||| |||||||| || ||||||| | || || | Sbjct 7559 TCTGGCTGAAGAAGCGCGGCCTGATGCCTGGCCTGACCTTCTCCAACGAGCTTATTTCTC 7618 Query 58093 GCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAAC 58152 | |||||||| || || || || || || ||||| ||| |||||| | | || ||| Sbjct 7619 GTGACGAGGGCCTGCACACCGACTTCGCTTGCCTGCTGTTCTCTCA---TCTGAA-GAAC 7674 Query 58153 CGACGC----GGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAG 58208 || | | ||| ||| ||| || ||| ||| || ||| ||| || | ||| Sbjct 7675 CGCCCCAGCAAGGAGATGATCCAGGAGATAATCGTCGATGCTGTCAAGATTGAGCAGGAG 7734 Query 58209 TTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAG 58268 || ||||||| ||||| || || ||||||| |||||| | ||| || Sbjct 7735 TTCCTCACCGAGGCCCTTCCCTGCGCTCTGCTCGGCATGAACTCCACACTCATGAAGCAG 7794 Query 58269 TACATTGAGTTTGTTGCCGACAGACTTTTG 58298 ||||||||||| ||||||||| | ||| || Sbjct 7795 TACATTGAGTTCGTTGCCGACCGCCTTCTG 7824 >seq2379 Length=13478 Score = 129 bits (142), Expect = 5e-25 Identities = 160/216 (74%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| |||||||||||||| || || ||||| ||||||||| | || || || |||| Sbjct 4330 CATGCAGATTTTCGTAAAGACGCTTACGGGCAAGACGATCACCCTGGAGGTGGAGTCGTC 4271 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | || || | ||| ||||||||| ||| | ||||| ||||| Sbjct 4270 GGACACGATTGACAATGTGAAGTCTAAAATCCAGGACAAGGAGGGCATCCCGCCAGACCA 4211 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA---CTCTATGACTATGAGCGATTA 31368 |||||| || || ||||||||||| |||||||| || | | | |||| || || Sbjct 4210 GCAGCGCCTTATCTTCGCTGGCAAGCAGTTGGAGGATGGCCGCACG-CTAT--CGGACTA 4154 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || |||||||||||||| ||||| || Sbjct 4153 CAACATCCAGAAGGAATCGACTCTTCACCTGGTGCT 4118 Score = 100 bits (110), Expect = 3e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| |||||||| ||||| || |||||||| || |||||| |||| || || | || Sbjct 4786 CATGCAGATTTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTCGAGTCTTC 4727 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | |||| | ||||| | || ||||||||| ||| | || || || || Sbjct 4726 TGATACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCGGATCA 4667 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || || || || || ||| | || ||| || | |||||| || Sbjct 4666 GCAGCGTCTGATTTTTGCCGGAAAGCAGCTCGAGGACGGCCGCACGCTCTCCGATTACAA 4607 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| || || || || || || ||||| || || | ||| | ||||||| Sbjct 4606 CATCCAGAAGGAGTCCACCCTGCATCTCGTCCTGCGTCTGCGTGGCGGTA 4557 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| ||||| |||||||| || ||||| ||| | || ||||| | || Sbjct 4101 ATGCAGATTTTCGTCAAGACGCTGACAGGGAAGACGATTACCTTGGAGGTTGAGTCATCA 4042 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | || | || || || || ||||||||| ||| | || || |||||| Sbjct 4041 GATACGATTGACAACGTGAAGTCGAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAG 3982 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || || || ||||| ||| |||| ||| || | || || || Sbjct 3981 CAGCGGCTCATTTTTGCGGGCAAGCAGCTGGAGGACGGCCGCACCCTCTCGGACTACAAT 3922 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || || |||||||| || || ||||| ||| | ||| | ||||| Sbjct 3921 ATCCAGAAGGAATCGACGCTGCACCTGGTGCTTCGTCTGCGTGGCGG 3875 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| ||||| ||||| || ||||| | || || || |||| Sbjct 4557 ATGCAGATCTTCGTCAAGACGCTGACTGGCAAGACCATCACTCTGGAGGTCGAGTCGTCG 4498 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||||||| || | || ||||||||| Sbjct 4497 GACACCATCGATAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCACCCGACCAG 4438 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||||||||| ||| | || || ||| | || || ||| Sbjct 4437 CAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAGGATGGACGGACCCTTTCGGACTACAAC 4378 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || ||||| || || ||||| || Sbjct 4377 ATTCAGAAGGAGTCGACGCTGCACCTGGTGCT 4346 >seq1979 Length=23555 Score = 95.1 bits (104), Expect = 1e-14 Identities = 153/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261 ||||| ||||| || || ||||| || |||||| | || || || | || |||| || Sbjct 2992 TTCGTGAAGACCCTTACGGGCAAGACCATCACCTTGGAGGTCGAGTCCTCGGACACGATC 2933 Query 31262 GAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321 || | ||||| | || ||||||||| ||| | ||||||||||||||||| || Sbjct 2932 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCAGCAGCGCCTG 2873 Query 31322 ATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAA 31381 || || |||||||| ||| | || ||| || || || || || || || || Sbjct 2872 ATCTTTGCTGGCAAGCAGCTCGAGGACGGCCGTACCCTGTCTGACTACAATATCCAGAAG 2813 Query 31382 GAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || |||||||| || ||||| || | ||| | || |||| Sbjct 2812 GAGTCGACTCTGCACCTGGTGCTCCGCCTGCGTGGTGGTA 2773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445751427821040