Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12-
22] 2,687 sequences; 28,556,450 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq2494 363 1e-95
seq2400 131 1e-25
seq2379 129 5e-25
seq1979 95.1 1e-14
>seq2494
Length=11727
Score = 363 bits (402), Expect = 1e-95
Identities = 1226/1888 (65%), Gaps = 38/1888 (2%)
Strand=Plus/Minus
Query 22105 CTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCC 22164
|| ||| || || ||||| |||| | ||||| | | ||||| || || ||||| ||
Sbjct 3430 CTGGTCGACCGTGAACTGGATGGGCTGGGCGGCTGCCTGCGTGCGCAGGTAGTACATTCC 3371
Query 22165 CGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGG 22224
||||||||| |||| |||||| || || || || || | || || | ||
Sbjct 3370 CGTCTTCAGGCCCAGCTTCCAGCCGGTGAAGTGCATGCTTGTGATCTTGCCCATGGTGGG 3311
Query 22225 CAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGC 22284
| ||||| | |||| |||||| ||| ||||| ||||| || || ||||| ||
Sbjct 3310 CTCACGCATGTGAATGTTGAGCGACTGCGACTGGTCGATGAACGCGCCACGGTCGGCCGC 3251
Query 22285 CATATTTATCAAT-GTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCT 22343
||| | | |||| || ||| ||| || ||||| |||||||||||||| | |||| |
Sbjct 3250 CATCTGCA-CAATCGTGCGCTGCGAGATCTCCCAAACGGTCTTGTACAGAGCCTTGATGT 3192
Query 22344 CTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAA 22403
| ||| || ||| |||||| || ||| | | ||||| || || |
Sbjct 3191 CGGCCGGGATGTTGGGGATGTTCTGGATCGAACCGCCCTCGGCAATGATGCGGTTCTTCA 3132
Query 22404 TCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTT 22463
| | || ||||| || || | | ||| || | ||| |||| || || |
Sbjct 3131 TGTTGTCCGACCACAGCCCCATATCAACGAGATCCTTCAGCAGCCACGGGTTGACAACCT 3072
Query 22464 GAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATT 22523
|||||||||| | || || ||||| ||| |||||||| ||| |||| ||||| |||
Sbjct 3071 GAAACTCGCCCGCCAGCACACGGCGCGAGTAGATGTTGGACGTGTACGGCTCGAAGCATT 3012
Query 22524 CATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGT 22583
| ||||| ||||| ||||| | ||||| || || ||||| || |||| || || ||
Sbjct 3011 CGTTGTTGCCCAGGATCTGCGACGTCGACGCTGTTGGCATGGGGGCCACCAACAGACTGT 2952
Query 22584 TTCTCAAGCCGTGCT--TTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGA 22641
| | | |||||||| |||| || | | |||| |||||||||||| || ||
Sbjct 2951 TGCGGACGCCGTGCTCCTTGATCTTC-AGACG-GAGCGAGTCCCAGTCCCACAGGTCAGA 2894
Query 22642 CGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTTC 22701
|||| |||| ||||||||| ||| |||| | || || | | || ||| ||
Sbjct 2893 CGGCTTCAC---GTCCCACATGTCGGGCTGCAGAATTCCCTGAGACACAGGAGAGCCCTC 2837
Query 22702 GTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTA 22761
||||| | || | || | ||| ||| || ||||| ||| | ||| |||
Sbjct 2836 ATACGTCGCATAGGTGCCCTCAATCTGGGCCAGGTCGCACGACGCAGTGAGAGCGGCGTG 2777
Query 22762 ATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGC----GGCGACGCTTTCGTACG 22817
|| || ||||| ||||||| |||||| | || || |||||| || | |
Sbjct 2776 GTAGATGGTCTCAAAGATTTGCTTGTTGAGCTCCCGTGCCTCGGGCGAC----TCAAAGG 2721
Query 22818 GCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGT 22877
|||| |||| | || ||| || || |||| ||||| || || | ||| || || ||||
Sbjct 2720 GCATGCGCAGCGCCAGGAAAGCATCTGCCAGCCCCTGCACACCCAAACCAATAGGACGGT 2661
Query 22878 TTTTCAGATTCGACACTTTT--GCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCT 22935
|| || | || | ||||| |||| || || | || ||| || | |
Sbjct 2660 GGCGCATGTTG--CTGTTCTCGGCCTCCGGCACGGGGTAGTAGTTGACATCAATGATGCG 2603
Query 22936 GTTCAAGTTTCTGGTCA--CAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACG 22993
||||| ||| | || || || | | | | | |||||||| ||
Sbjct 2602 GTTCAGGTTGC-GGACAAGCAGCTGT-GCAACCTCGTGGAGCTTCTTGAAGTCGTA--CG 2547
Query 22994 CC-CGAT--TGTA--CAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCA 23048
| || | |||| ||||||| | || | || || || ||||| || || |
Sbjct 2546 TCTCGTTGTTGTAGTCAACAAAAGACGGCAGTGCTAGGGAAGCTAGGTTGCACACAGCAA 2487
Query 23049 CCTCGTCTT-TGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTG 23107
|||| || || || ||||||| ||||| || || || | ||| | || |||
Sbjct 2486 CCTCATCCGGTGCAC-TGTACTCCACAATCTCCGTGCACAAGTTGGAGCTGCGGATGGTG 2428
Query 23108 CCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTG 23167
|| | || |||||||||| || || || || ||||||||||||||| |||| ||
Sbjct 2427 CCTAGGTTCTTCTGGTTGCTCTTGCGGTTACAGTGGTCCTTGTAGAGCATGAACGGATTG 2368
Query 23168 CCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGC 23227
|||||||| ||| | ||||| | || ||| | |||| || | || | |
Sbjct 2367 CCCGTCTCCGTCTGAGCCTCGAGAACTGCGTACCAGAGCTTCTGGGCCTTGAC-CTTTTT 2309
Query 23228 ACGTACCTG-CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACA 23286
|| | | ||||| ||||||||| | |||| || ||||| ||| | |||||
Sbjct 2308 GCGGCCACGACCTTCGCGCTCGTACTTCTCATACAGGGCCTCAAACTCGTCGCCGTAGAC 2249
Query 23287 GTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAAC 23346
||| ||||| ||||| | | | || ||||| || ||||| || || |||||
Sbjct 2248 GTCCGCCAGACCGGGACACTCGTTGGGGCACATCAGCGTCCACTCGCCGTTCTTCTCAAC 2189
Query 23347 GCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTC 23406
|| |||| || ||||| || ||||| || || |||||| ||||| || || | |||
Sbjct 2188 CCGCTTCATGAACAGATCAGGGATCCAGAGCGCCAGGAACAGATCGCGAGCACGAATCTC 2129
Query 23407 CTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTC 23466
||| ||||| ||| || || || | || || || || || |||||||| |||||
Sbjct 2128 CTCCTTGCCATGGTTTTTGCGCAGGTCAAGGAACTCAAAGACATCAGCATGCCAAGGCTC 2069
Query 23467 GAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGT 23526
||||| | | || |||||||| | ||| || |||||||| || || || || |||||
Sbjct 2068 TAGGTAGATGCAGAAAGCGCCCGGGCGCTTGTTTCCGCCCTGGTCCACATAGCGAGCCGT 2009
Query 23527 GTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCAC 23586
||||||||| || | ||||| || | || || ||||||| |||| | ||| || |
Sbjct 2008 GTTGTTGTAGACACGGAGCATAGGGATGATGCCATTGGACGTGCCGTTTGTGCCGGCAAT 1949
Query 23587 ACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGA 23646
|| || | || || | ||| |||| || || ||||| || ||| || ||
Sbjct 1948 GTAGGAGCCGGTAGCCCGGATACGGTGGACGTTGAGGCCAATGCCACCAGCCGTCTTGGA 1889
Query 23647 TATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGC 23706
||||| || || || || ||||| ||||| ||||| |||||||| || || | |
Sbjct 1888 GATCATGGCACAGGTCTTGAGGGTGTCATAGATACCCTCAATGCTGTCATCCTTTATGTC 1829
Query 23707 GACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCT 23766
|| | ||| || || |||||||| || | || || |||| ||| ||||||||
Sbjct 1828 CACAAGGAAGCAGGATGACATTTGGGCCTGTGGTGTGCCGGCGTTGAAGAGTGTCGGCGA 1769
Query 23767 GGCGTGCGTAAAGTATCCATTCGACAT-TAGATTGTACGTGTCGATGGCGGCATCAATGT 23825
||| ||||| ||| || |||||||| ||| ||||| || || | | || | |
Sbjct 1768 GGCATGCGTGAAGAATTTGTTCGACATGTAG-TTGTATGTCTCAACCACACGCTCCACAT 1710
Query 23826 CCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGA 23885
|| || || || | || |||||||| ||||||| || || | |||||| |
Sbjct 1709 TATCACCCCAGATGCCAACTGCCACGCGCATAATCATGTGCTGCGGCCGCTCGACAATCT 1650
Query 23886 CGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGT 23945
||| | | |||| || || || || | || || || || |||||||| | ||||
Sbjct 1649 TGCCATCGAGCTTGAGTAGGTAAGACCGCTCCAGTGTCTTGAAACCAAAATATTGGTAGT 1590
Query 23946 TAAAGTCACGATCGTGCACTATGGCCGA 23973
| ||||| || |||| || ||||||||
Sbjct 1589 TGAAGTCGCGGTCGTAGACAATGGCCGA 1562
>seq2400
Length=47555
Score = 131 bits (144), Expect = 1e-25
Identities = 266/390 (68%), Gaps = 10/390 (3%)
Strand=Plus/Plus
Query 57914 CAAGAAGGCAGAGTGGTCAATCAAATGGATAAAA-AGCGCCACGGCCACGTTCGCCGAGA 57972
||||||||| || ||| | |||| ||||| | | ||| | | |||| || || ||
Sbjct 7440 CAAGAAGGCCGATTGGGCTCTCAAGTGGATCTCAGACCGCGA-GTCCACCTTTGCTCAGC 7498
Query 57973 GGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATAT 58032
| || |||| || ||||| || || || || ||||| || ||| | | || |
Sbjct 7499 GCCTGGTCGCTTTTGCCGCTGTGGAGGGCATCTTCTTCAGCGGTGCCTTCTCTTCCATCT 7558
Query 58033 TTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGC 58092
| ||| ||||||| |||||||||||||| |||||||| || ||||||| | || || |
Sbjct 7559 TCTGGCTGAAGAAGCGCGGCCTGATGCCTGGCCTGACCTTCTCCAACGAGCTTATTTCTC 7618
Query 58093 GCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAAC 58152
| |||||||| || || || || || || ||||| ||| |||||| | | || |||
Sbjct 7619 GTGACGAGGGCCTGCACACCGACTTCGCTTGCCTGCTGTTCTCTCA---TCTGAA-GAAC 7674
Query 58153 CGACGC----GGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAG 58208
|| | | ||| ||| ||| || ||| ||| || ||| ||| || | |||
Sbjct 7675 CGCCCCAGCAAGGAGATGATCCAGGAGATAATCGTCGATGCTGTCAAGATTGAGCAGGAG 7734
Query 58209 TTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAG 58268
|| ||||||| ||||| || || ||||||| |||||| | ||| ||
Sbjct 7735 TTCCTCACCGAGGCCCTTCCCTGCGCTCTGCTCGGCATGAACTCCACACTCATGAAGCAG 7794
Query 58269 TACATTGAGTTTGTTGCCGACAGACTTTTG 58298
||||||||||| ||||||||| | ||| ||
Sbjct 7795 TACATTGAGTTCGTTGCCGACCGCCTTCTG 7824
>seq2379
Length=13478
Score = 129 bits (142), Expect = 5e-25
Identities = 160/216 (74%), Gaps = 6/216 (3%)
Strand=Plus/Minus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| |||||||||||||| || || ||||| ||||||||| | || || || ||||
Sbjct 4330 CATGCAGATTTTCGTAAAGACGCTTACGGGCAAGACGATCACCCTGGAGGTGGAGTCGTC 4271
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| | || | || || | ||| ||||||||| ||| | ||||| |||||
Sbjct 4270 GGACACGATTGACAATGTGAAGTCTAAAATCCAGGACAAGGAGGGCATCCCGCCAGACCA 4211
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA---CTCTATGACTATGAGCGATTA 31368
|||||| || || ||||||||||| |||||||| || | | | |||| || ||
Sbjct 4210 GCAGCGCCTTATCTTCGCTGGCAAGCAGTTGGAGGATGGCCGCACG-CTAT--CGGACTA 4154
Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||||| || || |||||||||||||| ||||| ||
Sbjct 4153 CAACATCCAGAAGGAATCGACTCTTCACCTGGTGCT 4118
Score = 100 bits (110), Expect = 3e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| |||||||| ||||| || |||||||| || |||||| |||| || || | ||
Sbjct 4786 CATGCAGATTTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTCGAGTCTTC 4727
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|| | |||| | ||||| | || ||||||||| ||| | || || || ||
Sbjct 4726 TGATACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCGGATCA 4667
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
||||||||| || || || || || ||| | || ||| || | |||||| ||
Sbjct 4666 GCAGCGTCTGATTTTTGCCGGAAAGCAGCTCGAGGACGGCCGCACGCTCTCCGATTACAA 4607
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||| || || || || || || ||||| || || | ||| | |||||||
Sbjct 4606 CATCCAGAAGGAGTCCACCCTGCATCTCGTCCTGCGTCTGCGTGGCGGTA 4557
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| |||||||| ||||| |||||||| || ||||| ||| | || ||||| | ||
Sbjct 4101 ATGCAGATTTTCGTCAAGACGCTGACAGGGAAGACGATTACCTTGGAGGTTGAGTCATCA 4042
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | | || | || || || || ||||||||| ||| | || || ||||||
Sbjct 4041 GATACGATTGACAACGTGAAGTCGAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAG 3982
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||||| || || || || ||||| ||| |||| ||| || | || || ||
Sbjct 3981 CAGCGGCTCATTTTTGCGGGCAAGCAGCTGGAGGACGGCCGCACCCTCTCGGACTACAAT 3922
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
|| || || |||||||| || || ||||| ||| | ||| | |||||
Sbjct 3921 ATCCAGAAGGAATCGACGCTGCACCTGGTGCTTCGTCTGCGTGGCGG 3875
Score = 98.7 bits (108), Expect = 9e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| ||||| ||||| || ||||| | || || || ||||
Sbjct 4557 ATGCAGATCTTCGTCAAGACGCTGACTGGCAAGACCATCACTCTGGAGGTCGAGTCGTCG 4498
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | ||||| | || ||||||||| || | || |||||||||
Sbjct 4497 GACACCATCGATAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCACCCGACCAG 4438
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||||| || || ||||||||||| ||| | || || ||| | || || |||
Sbjct 4437 CAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAGGATGGACGGACCCTTTCGGACTACAAC 4378
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||||| || || ||||| || || ||||| ||
Sbjct 4377 ATTCAGAAGGAGTCGACGCTGCACCTGGTGCT 4346
>seq1979
Length=23555
Score = 95.1 bits (104), Expect = 1e-14
Identities = 153/220 (70%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261
||||| ||||| || || ||||| || |||||| | || || || | || |||| ||
Sbjct 2992 TTCGTGAAGACCCTTACGGGCAAGACCATCACCTTGGAGGTCGAGTCCTCGGACACGATC 2933
Query 31262 GAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321
|| | ||||| | || ||||||||| ||| | ||||||||||||||||| ||
Sbjct 2932 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCAGCAGCGCCTG 2873
Query 31322 ATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAA 31381
|| || |||||||| ||| | || ||| || || || || || || || ||
Sbjct 2872 ATCTTTGCTGGCAAGCAGCTCGAGGACGGCCGTACCCTGTCTGACTACAATATCCAGAAG 2813
Query 31382 GAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| |||||||| || ||||| || | ||| | || ||||
Sbjct 2812 GAGTCGACTCTGCACCTGGTGCTCCGCCTGCGTGGTGGTA 2773
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445751427821040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |