Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12- 22] 2,687 sequences; 28,556,450 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq2494 100 6e-16 >seq2494 Length=11727 Score = 100 bits (110), Expect = 6e-16 Identities = 185/266 (70%), Gaps = 4/266 (2%) Strand=Plus/Minus Query 94779 GTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATA 94838 || || ||| | || ||||| ||||||||||| || || ||| || || ||||| Sbjct 1918 GTTGAGGCCAATGCCACCAGCCGTCTTGGAGATCATGGCACAGGTCTTGAGGGTGTCATA 1859 Query 94839 AATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGG-GTG 94897 |||||||||||||| ||||| | | | ||| ||||||||| || || | ||||| || Sbjct 1858 GATACCCTCAATGCTGTCATCCTTTATGTCCACAAGGAAGCAGGATGACATTTGGGCCTG 1799 Query 94898 TGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGA 94957 || ||| || || || ||||| || || ||||| || || | | |||||||| Sbjct 1798 TG-GTGTGCCGGCGTTGAAGAGTGTCGGCGAGGCATGCGTGAAGAATTTGTTCGACATGT 1740 Query 94958 GATCATATGTTTCAATGACA-GATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGC 95016 | ||||| |||| ||| | | | | | || | ||||| || ||||| ||| Sbjct 1739 AGTTGTATGTCTCAACCACACGCTCCACATTATCACCCCAG-ATGCCAACTGCCACGCGC 1681 Query 95017 ATAATCATGTCCTGAGGGCGCTCAAC 95042 |||||||||| ||| || ||||| || Sbjct 1680 ATAATCATGTGCTGCGGCCGCTCGAC 1655 Score = 84.2 bits (92), Expect = 4e-11 Identities = 114/158 (72%), Gaps = 6/158 (4%) Strand=Plus/Minus Query 94399 CCTTCAGCCTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTCGGAAAGG 94458 ||||| ||| || ||||| |||| |||| |||||| ||||| | |||||| | || Sbjct 2298 CCTTCGCGCTCGTACTTCTCATACAGGGCCTCAAACTCGTCGCCGTAGACGTCCGCCAGA 2239 Query 94459 CCAGGGCACTCGTGGGGGCACATCAGGGACCAATTCTTCCCAGCCTTC---ACTCTCTCC 94515 || || ||||||| |||||||||||| | ||| || || |||| || | || | Sbjct 2238 CCGGGACACTCGTTGGGGCACATCAGCGTCCA---CTCGCCGTTCTTCTCAACCCGCTTC 2182 Query 94516 ATGAAGAGATCAGATACCCAGATAGCTGGGAAAAGATC 94553 ||||| ||||||| | ||||| || |||| ||||| Sbjct 2181 ATGAACAGATCAGGGATCCAGAGCGCCAGGAACAGATC 2144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989549931406085