Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12-
22] 2,687 sequences; 28,556,450 total letters
Query= NC_005261.2
Length=137821
Score E
Sequences producing significant alignments: (Bits) Value
seq1224 100 3e-16
>seq1224
Length=30292
Score = 100 bits (110), Expect = 3e-16
Identities = 193/277 (70%), Gaps = 16/277 (6%)
Strand=Plus/Minus
Query 99502 CGCCCCCAGCCCAGGCTGGCGTGCGAGCCCGGCGCCCCGCTC-CGCACGGTGAGCGAGGT 99560
||| ||||||| || |||||||||||| |||| | || | ||||| || ||| ||
Sbjct 27623 CGCTCCCAGCCGTGGTTGGCGTGCGAGCT-GGCGTCGTGCGCGCGCACCGTCAGCACCGT 27565
Query 99561 GTTGAGCAGCAGCACGCCGCGGCGCGCCCA-GGCCTC--CAGGCAGCCGT---GCTGCGG 99614
|||||||| ||||| || || ||||| ||| || ||||| || | |||||||
Sbjct 27564 GTTGAGCATGAGCACACCACGCTCGGCCCACGGCGTCAGCAGGCCACCCTTCTGCTGCGG 27505
Query 99615 CCGCGGG------GTCCCGGGGAAGTTCTTCTGCACGGCCGCGTAGATGTTCTGGAGGCT 99668
|||| || | ||| ||| |||| | ||| | || |||||| | ||
Sbjct 27504 TGGCGGCATGAACGTGTCCGGGTAGTCGTTCTTGAGGGCGACATACATGTTCCGAAGCGA 27445
Query 99669 GGGCGGGATCGGAACGCCGCGG-TTCACGCTGAAGGCCAGGCCGTGGGCCTGCCCGTGGC 99727
||||| || || | |||| || || ||||||| ||||||||||| || | |
Sbjct 27444 AGGCGGCGCCGCAATGG-GCGGCTTGACCGAAAAGGCCAACCCGTGGGCCTGGCCATCGT 27386
Query 99728 TGTGGTAGGGGTCCTGGCCCAGGATGACGACCTTGAC 99764
||||||| ||||||||||| ||||||||||| |||||
Sbjct 27385 TGTGGTACGGGTCCTGGCCGAGGATGACGACTTTGAC 27349
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 440884391298120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |