Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12- 22] 2,687 sequences; 28,556,450 total letters Query= NC_005261.2 Length=137821 Score E Sequences producing significant alignments: (Bits) Value seq1224 100 3e-16 >seq1224 Length=30292 Score = 100 bits (110), Expect = 3e-16 Identities = 193/277 (70%), Gaps = 16/277 (6%) Strand=Plus/Minus Query 99502 CGCCCCCAGCCCAGGCTGGCGTGCGAGCCCGGCGCCCCGCTC-CGCACGGTGAGCGAGGT 99560 ||| ||||||| || |||||||||||| |||| | || | ||||| || ||| || Sbjct 27623 CGCTCCCAGCCGTGGTTGGCGTGCGAGCT-GGCGTCGTGCGCGCGCACCGTCAGCACCGT 27565 Query 99561 GTTGAGCAGCAGCACGCCGCGGCGCGCCCA-GGCCTC--CAGGCAGCCGT---GCTGCGG 99614 |||||||| ||||| || || ||||| ||| || ||||| || | ||||||| Sbjct 27564 GTTGAGCATGAGCACACCACGCTCGGCCCACGGCGTCAGCAGGCCACCCTTCTGCTGCGG 27505 Query 99615 CCGCGGG------GTCCCGGGGAAGTTCTTCTGCACGGCCGCGTAGATGTTCTGGAGGCT 99668 |||| || | ||| ||| |||| | ||| | || |||||| | || Sbjct 27504 TGGCGGCATGAACGTGTCCGGGTAGTCGTTCTTGAGGGCGACATACATGTTCCGAAGCGA 27445 Query 99669 GGGCGGGATCGGAACGCCGCGG-TTCACGCTGAAGGCCAGGCCGTGGGCCTGCCCGTGGC 99727 ||||| || || | |||| || || ||||||| ||||||||||| || | | Sbjct 27444 AGGCGGCGCCGCAATGG-GCGGCTTGACCGAAAAGGCCAACCCGTGGGCCTGGCCATCGT 27386 Query 99728 TGTGGTAGGGGTCCTGGCCCAGGATGACGACCTTGAC 99764 ||||||| ||||||||||| ||||||||||| ||||| Sbjct 27385 TGTGGTACGGGTCCTGGCCGAGGATGACGACTTTGAC 27349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440884391298120