Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12- 22] 2,687 sequences; 28,556,450 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq2379 113 1e-19 >seq2379 Length=13478 Score = 113 bits (124), Expect = 1e-19 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || || || ||||| || || || || || || || | ||||| Sbjct 4574 AGGACGAGATGCAGGGTGGACTCCTTCTGGATGTTGTAATCGGAGAGCGTGCGGCCGTCC 4633 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || || ||||| |||||||| || | ||| ||||| || || || || || || ||| Sbjct 4634 TCGAGCTGCTTTCCGGCAAAAATCAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCC 4693 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 |||||||| | || || || || | |||||| || || ||||| || || || ||| Sbjct 4694 TGAATCTTGGACTTGACGTTGTCGATGGTATCAGAAGACTCGACCTCGAGGGTGATGGTC 4753 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || || || || || |||||||| Sbjct 4754 TTGCCTGTGAGGGTCTTGACGAAAATCTGCAT 4785 Score = 109 bits (120), Expect = 1e-18 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || ||||| ||||| ||||| ||||| || || || | ||||| Sbjct 3889 AAGCACCAGGTGCAGCGTCGATTCCTTCTGGATATTGTAGTCCGAGAGGGTGCGGCCGTC 3948 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || || || |||||||| |||| ||| || || || || || || || || || Sbjct 3949 CTCCAGCTGCTTGCCCGCAAAAATGAGCCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTC 4008 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||||||||| | || || || || | ||||| | || ||||| | ||||| || Sbjct 4009 CTGAATCTTCGACTTCACGTTGTCAATCGTATCTGATGACTCAACCTCCAAGGTAATCGT 4068 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| || || || || || || || |||||||| Sbjct 4069 CTTCCCTGTCAGCGTCTTGACGAAAATCTGCAT 4101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151358760591396