Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12- 22] 2,687 sequences; 28,556,450 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq2379 105 6e-18 >seq2379 Length=13478 Score = 105 bits (116), Expect = 6e-18 Identities = 148/206 (72%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTG 48582 ||| || ||| |||||| || ||||||||||| | | || ||||||| ||||| Sbjct 4582 ATGCAGGGTGGACTCCTTCTGGATGTTGTAATCGGAGAGCGTGCGGCCGTCCTCGAGCTG 4641 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 ||| ||| | |||| | ||||||||||||| || | | ||||||||| ||| || Sbjct 4642 CTTTCCGGCAAAAATCAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGAATCTT 4701 Query 48643 CTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCG 48700 ||||| | | || |||||||| | |||||| ||||| || ||||| || || Sbjct 4702 GGACTTGACGTTGTCG--ATGGTATCAGAAGACTCGACCTCGAGGGTGATGGTCTTGCCT 4759 Query 48701 GTGAGAGTTTTCACAAAAATCTGCAT 48726 ||||| || || || ||||||||||| Sbjct 4760 GTGAGGGTCTTGACGAAAATCTGCAT 4785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421237404944687