Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12-
22] 2,687 sequences; 28,556,450 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq2214 98.7 2e-16
seq2122 96.9 5e-16
>seq2214
Length=16746
Score = 98.7 bits (108), Expect = 2e-16
Identities = 84/101 (83%), Gaps = 2/101 (2%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||||| || || | ||| |||||| || ||||| || || ||||| ||||| |||||
Sbjct 14206 GCGAAGCGCCACCGGAAGAT-TCTTCGTGACAACATTCAGGGCATCACTAAGCCCGCTAT 14264
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
||| ||||| |||||||||||||| ||||||||| ||||||
Sbjct 14265 CCGGCGTCTTGCTCGTCGTGGTGGTGTCAAGCGTATCTCTG 14305
>seq2122
Length=53479
Score = 96.9 bits (106), Expect = 5e-16
Identities = 119/163 (73%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595
|| |||| || |||| ||||| ||| | ||| ||||||| || ||| |||| |||||
Sbjct 30330 TGATCTACGAGGAGACTCGTGGTGTCCTCAAGTCCTTCCTCGAGGGCGTCATCCGTGATG 30271
Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655
|| || ||| || |||||||| || || ||||||||||| || | || | |||||||
Sbjct 30270 CTGTCACCTACACTGAGCACGCCAAGCGCAAGACTGTCACATCTCTTGACGTTGTCTATG 30211
Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTA 16698
| | || || |||||||| | | || ||||| || ||||
Sbjct 30210 CTCTCAAGCGCCAAGGCCGCACTCTGTACGGTTTCGGTGGTTA 30168
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79072743257091
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |