Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12- 22] 2,687 sequences; 28,556,450 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq2214 98.7 2e-16 seq2122 96.9 5e-16 >seq2214 Length=16746 Score = 98.7 bits (108), Expect = 2e-16 Identities = 84/101 (83%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || || | ||| |||||| || ||||| || || ||||| ||||| ||||| Sbjct 14206 GCGAAGCGCCACCGGAAGAT-TCTTCGTGACAACATTCAGGGCATCACTAAGCCCGCTAT 14264 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||||| |||||||||||||| ||||||||| |||||| Sbjct 14265 CCGGCGTCTTGCTCGTCGTGGTGGTGTCAAGCGTATCTCTG 14305 >seq2122 Length=53479 Score = 96.9 bits (106), Expect = 5e-16 Identities = 119/163 (73%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595 || |||| || |||| ||||| ||| | ||| ||||||| || ||| |||| ||||| Sbjct 30330 TGATCTACGAGGAGACTCGTGGTGTCCTCAAGTCCTTCCTCGAGGGCGTCATCCGTGATG 30271 Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655 || || ||| || |||||||| || || ||||||||||| || | || | ||||||| Sbjct 30270 CTGTCACCTACACTGAGCACGCCAAGCGCAAGACTGTCACATCTCTTGACGTTGTCTATG 30211 Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTA 16698 | | || || |||||||| | | || ||||| || |||| Sbjct 30210 CTCTCAAGCGCCAAGGCCGCACTCTGTACGGTTTCGGTGGTTA 30168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79072743257091