Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12- 22] 2,687 sequences; 28,556,450 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq2494 147 3e-30 seq2400 116 5e-21 >seq2494 Length=11727 Score = 147 bits (162), Expect = 3e-30 Identities = 469/719 (65%), Gaps = 20/719 (3%) Strand=Plus/Minus Query 63138 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 63197 || |||||||| || | || | ||| || ||||| || | || ||||||| || | Sbjct 2268 TCAAACTCGTCGCCGTAGACGTCCGCCAGACCGGGACACTCGTTGGGGCACATCAGCGTC 2209 Query 63198 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63257 ||||| |||| | || || || ||||| || |||||||| ||||| || || | || Sbjct 2208 CACTCGCCGTTCTTCTCAACCCGCTTCATGAACAGATCAGGGATCCAGAGCGCCAGGAAC 2149 Query 63258 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTA---AGATCGAGGAACGCC 63314 ||||| | | | | ||||| || || || ||||| || || |||||| | Sbjct 2148 AGATCGCGAGCACGAATCTCCTCCTTGCC---ATGGTTTTTGCGCAGGTCAAGGAACTCA 2092 Query 63315 ATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCT 63374 | | ||||| |||||| || || | ||| ||| | | | || || || |||||||| Sbjct 2091 AAGACATCAGCATGCCAAGGCTCTAGGTAGATGCAGAAAGCGCCCGGGCGCTTGTTTCCG 2032 Query 63375 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTT 63434 ||||| || | || | ||| ||||| || || || | | ||| || || || || || Sbjct 2031 CCCTGGTCCACATAGCGAGCCGTGTTGTTGTAGACACGGAGCATAGGGATGATGCCATTG 1972 Query 63435 GATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAA--TTGATA 63492 || | || || || |||| || ||| || | || || ||| | |||| Sbjct 1971 GACGTGCCGTTTGTGCCGGCAATGTAGGAGCCGGTAGCCCGGATACGGTGGACGTTGA-- 1914 Query 63493 GACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATAC 63552 | || || || || ||| | || ||||| | || || || | ||||||||||||| Sbjct 1913 GGCCAATGCCACCAGCCGTCTTGGAGATCATGGCACAGGTCTTGAGGGTGTCATAGATAC 1854 Query 63553 CCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAG 63612 |||| ||||| ||||| | |||| | || || ||| ||||||||| | | Sbjct 1853 CCTCAATGCTGTCATCCTTTATGTCCACAAGGAAGCAGGATGACATTTGGGCCTGTGGTG 1794 Query 63613 TTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTT-TTCAGAAAGTAGATTG 63671 | || || || || | || || || || ||||| || |||| ||| | |||| ||| Sbjct 1793 TGCCGGCGTTGAAGAGTGTCGGCGAGGCATGCGTGAAGAATTTGTTCGACATGTAG-TTG 1735 Query 63672 TACGTCTCAATAGCTGAGTCTA---TATC-CCATTGATGAATTCCTACTGCGACACGCAT 63727 || ||||||| | || | |||| || |||| || ||||| || ||||| Sbjct 1734 TATGTCTCAACCACACGCTCCACATTATCACCCCAGATG----CCAACTGCCACGCGCAT 1679 Query 63728 TAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTC 63787 | ||||||||| || | || || |||||| | | || | | ||| || || Sbjct 1678 AATCATGTGCTGCGGCCGCTCGACAATCTTGCCATCGAGCTTGAGTAGGTAAGACCGCTC 1619 Query 63788 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGT 63846 || || || ||||||||||| | ||| ||||| || ||||| | ||| |||||| Sbjct 1618 CAGTGTCTTGAAACCAAAATATTGGTAGTTGAAGTCGCGGTCGTAGACAATGGCCGAGT 1560 >seq2400 Length=47555 Score = 116 bits (128), Expect = 5e-21 Identities = 157/218 (72%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 33295 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 33354 |||| || || ||||| ||| |||||| |||||||| | | ||| || |||||||| Sbjct 7658 AACAGCAGGCAAGCGAAGTCGGTGTGCAGGCCCTCGTCACGAGAAATAAGCTCGTTGGAG 7599 Query 33355 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCA 33414 || || || || ||||| ||||| ||||| || ||||| || ||||||| ||| | || Sbjct 7598 AAGGTCAGGCCAGGCATCAGGCCGCGCTTCTTCAGCCAGAAGATGGAAGAGAAGGCACCG 7539 Query 33415 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CG 33471 |||||||| || || || || ||||| || | || | || || | || || Sbjct 7538 CTGAAGAAGATGCCCTCCACAGCGGCAAAAGCGACCAGGCGCTGAGCAAAGGTGGACTCG 7479 Query 33472 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 33509 | ||| |||||||| ||||||||||||||||||| Sbjct 7478 CGGTCTGAGATCCACTTGAGAGCCCAATCGGCCTTCTT 7441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622926276760920