Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12-
22] 2,687 sequences; 28,556,450 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq2494 349 9e-91
>seq2494
Length=11727
Score = 349 bits (386), Expect = 9e-91
Identities = 1166/1791 (65%), Gaps = 35/1791 (2%)
Strand=Plus/Plus
Query 363386 ATATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTA-TCAATGGTGATATT 363444
||||||| || | ||||| ||||| || |||||| ||| || |||| | |||
Sbjct 1597 ATATTTT-GGTTTCAAGACACTGGAGCGGTCTTACCTA-CTCAAGCTCGATGGCAAGATT 1654
Query 363445 GTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTT 363504
|| || || |||||||| ||| | ||||| || || |||| ||| | ||||
Sbjct 1655 GTCGAGCGGCCGCAGCACATGATTATGCGCGTGGCAGTTGGCATCTGGGGTGATAATGTG 1714
Query 363505 GATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTA-----TTCACGCACGCCA 363559
|| | | |||| ||||| || ||| || ||| | |||||||| |||
Sbjct 1715 GAGCGTGTGGTTGAGACATACAA----CTACATG-TCGAACAAATTCTTCACGCATGCCT 1769
Query 363560 CGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAA 363619
|||| ||| | | ||| || || || | | | || ||||| || ||||| ||| |
Sbjct 1770 CGCCGACACTCTTCAACGCCGGCACACCACAGGCCCAAATGTCATCCTGCTTCCTTGTGG 1829
Query 363620 AAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTT 363679
| || ||||| || ||| |||||||||| |||||| || |||| ||||| | || |
Sbjct 1830 ACATAAAGGATGACAGCATTGAGGGTATCTATGACACCCTCAAGACCTGTGCCATGATCT 1889
Query 363680 CCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTTA 363737
|||||| || || || ||||| | | || ||||| | | || || || | | ||
Sbjct 1890 CCAAGACGGCTGGTGGCATTGGCCTCAACG-TCCACCGTATCCGGGCTACCGG-CTCCTA 1947
Query 363738 CATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAA 363797
|||| ||||||| || || ||||| | | || ||||| ||||| | ||||
Sbjct 1948 CATTGCCGGCACAAACGGCACGTCCAATGGCATCATCCCTATGCTCCGTGTCTACAACAA 2007
Query 363798 TACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTT-TGCTATGTATC 363856
|| || | || || |||||||| ||| |||||| || || || ||| || || |
Sbjct 2008 CACGGCTCGCTATGTGGACCAGGGCGGAAACAAGCGCCCGGGCGCTTTCTGC-ATCTACC 2066
Query 363857 TCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAG 363916
| |||||| ||||| ||| | |||||||| ||||| || || |||||| || || |
Sbjct 2067 TAGAGCCTTGGCATGCTGATGTCTTTGAGTTCCTTGACCTGCGCAAAAACCATGGCAAGG 2126
Query 363917 AGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGC 363976
|||| | ||||| || ||||||||| || || ||| | |||| | || |||||||
Sbjct 2127 AGGAGATTCGTGCTCGCGATCTGTTCCTGGCGCTCTGGATCCCTGATCTGTTCATGAAGC 2186
Query 363977 GCGTGGAGGCAGGTAAGA--ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTC 364034
| || ||| | | | | | ||| | || | ||||| |||| ||||| ||||| |
Sbjct 2187 GGGTTGAG--AAGAACGGCGAGTGGACGCTGATGTGCCCCAACGAGTGTCCCGGTCTGGC 2244
Query 364035 CGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAAT-CGGAGGGAAAGG 364093
|| || | || ||||| | || || || || || ||||| || || ||| ||
Sbjct 2245 GGACGTCTACGGCGACGAGTTTGAGGCCCTGTATGAGAAGTACGAGCGCGAAGGTCGTGG 2304
Query 364094 CTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGA 364153
| || || | | || |||||||| |||| || | | || | |||| ||||
Sbjct 2305 C-CGCAAAAAGGTCAAGGCCCAGAAGCTCTGGTACGCAGTTCTCGAGGCTCAGACGGAGA 2363
Query 364154 CAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACC 364213
| || | || | ||| | ||||| || || ||||||||| ||||||| || |||
Sbjct 2364 CGGGCAATCCGTTCATGCTCTACAAGGACCACTGTAACCGCAAGAGCAACCAGAAGAACC 2423
Query 364214 TTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGAC 364272
| || || || | |||| | ||| | || || |||||| | || |||| || || ||
Sbjct 2424 TAGGCACCATCC-GCAGCTCCAACTTGTGCACGGAGATTGTGGAGTACAGTGCACCGGAT 2482
Query 364273 GAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTA------AAAGAT 364326
||| ||| || || ||||| || || | || || ||| | ||||| || |
Sbjct 2483 GAGGTTGCTGTGTGCAACCTAGCTTCCCTAGCACTGCCGTCTTTTGTTGACTACAACAAC 2542
Query 364327 GGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTT-GCAATCTCGA 364385
| || | ||| | || | || | || || | | | |||| | |||| || |
Sbjct 2543 GAGACGTACGACTTCAAGAAGCTCCACGAGGTTGCACAGC-TGCTTGTCCGCAACCTGAA 2601
Query 364386 CAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCA 364445
| | || || || || || || | || || |||||| || ||||| ||
Sbjct 2602 CCGCATCATTGATGTCAACTACTACCCCGTGCCGGAGGCCGAGAACAGCAACATGCGCCA 2661
Query 364446 TCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGC 364505
|| || |||||| | ||||| ||||| || || || | ||| || ||| ||| |
Sbjct 2662 CCGTCCTATTGGTTTGGGTGTGCAGGGGCTGGCAGATGCTTTCCTGGCGCTGCGCATGCC 2721
Query 364506 ATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGC 364565
||||| ||||| || || || | || || ||| | |||||||| || || || ||
Sbjct 2722 CTTTGAGTCGCCCGAGGCACGGGAGCTCAACAAGCAAATCTTTGAGACCATCTACCACGC 2781
Query 364566 CGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGG 364625
||| | ||||| ||||| || |||| | | |||| | || | || ||||||||
Sbjct 2782 CGCTCTCACTGCGTCGTGCGACCTGGCCCAGATTGAGGGCACCTATGCGACGTATGAGGG 2841
Query 364626 GTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCG 364685
|| ||| | || ||||||| | ||| || | ||| | || | ||| |||| ||
Sbjct 2842 CTCTCCTGTGTCTCAGGGAATTCTGCAGCCCGACATGTGGGACGTGAAGCCGTCTGACCT 2901
Query 364686 ATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGT 364745
||| ||||||| |||| ||| || | ||| |||| || |||||| || |
Sbjct 2902 GTGGGACTGGGACTCGCTCCGTCTGAAGATCAAGGAGCACGGCGTCCGCAACAGTCTGTT 2961
Query 364746 TACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGA 364805
|| |||||||| || || || || | |||||||| || |||||||| ||||||||
Sbjct 2962 GGTGGCCCCCATGCCAACAGCGTCGACGTCGCAGATCCTGGGCAACAACGAATGCTTCGA 3021
Query 364806 ACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAA 364865
|||| || ||| | || || ||||| || || | || || |||| ||| || ||
Sbjct 3022 GCCGTACACGTCCAACATCTACTCGCGCCGTGTGCTGGCGGGCGAGTTTCAGGTTGTCAA 3081
Query 364866 TAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTA 364925
|| || | |||||||| || ||||||||| |||| ||||||||||
Sbjct 3082 CCCGTGGCTGCTGAAGGATCTCGTTGATATGGGGCTGTGGTCGGACAACATGAAGAACCG 3141
Query 364926 TATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCC 364985
||||| |||| ||||| | |||||||| || | || | || | ||| |
Sbjct 3142 CATCATTGCCGAGGGCGGTTCGATCCAGAACATCCCCAACATCCCGGCCGACATCAAGGC 3201
Query 364986 TATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCG 365045
| | ||||| ||||| ||||| || || ||| || | | | ||||||||||| ||
Sbjct 3202 TCTGTACAAGACCGTTTGGGAGATCTCGCAGCGCACGATTGTGCAGATGGCGGCCGACCG 3261
Query 365046 CGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGC 365105
|| || || ||| ||| |||||| | ||| | |||| | |||| ||| |
Sbjct 3262 TGGCGCGTTCATCGACCAGTCGCAGTCGCTCAACATTCACATGCGTGAGCCCACCATGGG 3321
Query 365106 CAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
|||| | ||| |||||| ||| ||| ||||| || || ||||| ||
Sbjct 3322 CAAGATCACAAGCATGCACTTCACCGGCTGGAAGCTGGGCCTGAAGACGGG 3372
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303308729201234
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |