Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12- 22] 2,687 sequences; 28,556,450 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq2494 174 1e-38 seq2379 134 1e-26 seq1920 122 8e-23 seq1979 105 6e-18 seq2400 84.2 2e-11 >seq2494 Length=11727 Score = 174 bits (192), Expect = 1e-38 Identities = 609/941 (65%), Gaps = 30/941 (3%) Strand=Plus/Minus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||| |||||||||||||| |||| |||||| ||| | || | ||| |||||| | || Sbjct 3081 TTGACAACCTGAAACTCGCCCGCCAGCACACGGCGCGAGTAGATGTTGGACGTGTACGGC 3022 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || | ||||| ||||||||||| || | |||| || || |||||| |||||| Sbjct 3021 TCGAAGCATTCGTTGTTGCCCAGGATCTGCGACGTCGACGCTGTTGGCATGGGGGCCACC 2962 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTC--CTTTAGCGTACCCCAATCCC 145235 || | ||||| | |||||||| ||||| ||||| |||| |||| |||| Sbjct 2961 AACAGACTGTTGCGGACGCCGTGCTCCTTGA--TCTTCAGACGGAGCGAGTCCCAGTCCC 2904 Query 145236 ATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGC 145295 | || || |||| ||||||||||||||||| ||||| ||| |||| | || Sbjct 2903 ACAGGTCAGACGGCTTCACGTCCCACATGTCGGGCTGCAGAATTCCCTGAGACACAGGAG 2844 Query 145296 TGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGCCTCCAGAG 145355 ||| | | | | || ||||| | | | ||| || ||||| ||| |||| Sbjct 2843 AGCCCTCATACGTCGCATAGGTGCCCTCAATCTGGGCCAGGTCGCACGACGCAGTGAGAG 2784 Query 145356 CGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGT 145415 || || || || ||||| |||||| |||||||| | || || ||| Sbjct 2783 CGGCGTGGTAGATGGTCTCAAAGATTTGCTTGTTGAGCTCCCGTGCCTCGGGCGACTCAA 2724 Query 145416 ACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCC 145475 | |||||||||||| | |||||||| || |||||||| | |||| || || || | Sbjct 2723 AGGGCATGCGCAGCGCCAGGAAAGCATCTGCCAGCCCCTGCACACCCAAACCAATAGGAC 2664 Query 145476 GATGTTTCATGTTGCTCATCCTCG----CCGACTCGATAGGATA-TCGATTACGGTCGAT 145530 | || ||||||||| | |||| ||| | || || || | | | || || || Sbjct 2663 GGTGGCGCATGTTGCT-GTTCTCGGCCTCCGGCACG---GGGTAGTAGTTGAC-ATCAAT 2609 Query 145531 AATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAA 145590 || |||| ||| || || | | || || || | | | ||| | ||||| | Sbjct 2608 GATGCGGTTCAGGTTGCGGACAAGCAGCTGTGCAACCTCGTGGAGCTTCTTGAAGTCGTA 2549 Query 145591 CCGAGCCTCGTCAACGACCACACAGCTATTGACG-----GCGATCGACGCCAAATTACAA 145645 | | ||||| | | || | | |||| || | || || | || || Sbjct 2548 C---GTCTCGTTGTTG--TAGTCAACAAAAGACGGCAGTGCTAGGGAAGCTAGGTTGCAC 2494 Query 145646 ACTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTG 145705 || || ||| || | | ||||| | || ||||| | |||||| ||| | | Sbjct 2493 ACAGCAACCTCATCCGGTGCACTGTACTCCACAATCTCCGTGCACAAGTTGGAGCTGCGG 2434 Query 145706 ATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTAC 145765 ||||| || || || | ||| || || || | ||| || |||||||||||||||| || Sbjct 2433 ATGGTGCCTAGGTTCTTCTGGTTGCTCTTGCGGTTACAGTGGTCCTTGTAGAGCATGAAC 2374 Query 145766 GGTCCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCAAG---TCCTGCGCACGC 145822 || ||| |||||| ||| | || ||| || || | || | ||| || Sbjct 2373 GGATTGCCCGTCTCCGTCTGAG---CCTCGAGAACTGCGTACCAGAGCTTCTGGGCCTTG 2317 Query 145823 ACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAA 145882 |||| | || || || || ||||| ||| || || |||||||| || Sbjct 2316 ACCTTTTTGCGGCCACGACCTTCGCGCTCGTACTTCTCATACAGGGCCTCAAACTCGTCG 2257 Query 145883 CCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTG 145942 |||||| || | ||| |||||||||| |||||| |||||||||| ||| ||||||| Sbjct 2256 CCGTAGACGTCCGCCAGACCGGGACACTCGTTGGGGCACATCAGCGTCCACTCGCCGTTC 2197 Query 145943 GCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGC 145983 | || |||| ||| |||| ||| || | ||| ||||| Sbjct 2196 TTCTCAACCCGCTTCATGAACAGATCAGGGATCCAGAGCGC 2156 >seq2379 Length=13478 Score = 134 bits (148), Expect = 1e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || |||| |||||| || | ||| | ||| |||||||| || |||||||||||| Sbjct 4559 CCGCCACGCAGACGCAGGACGAGATGCAGGGTGGACTCCTTCTGGATGTTGTAATCGGAG 4618 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| |||||||| || || | || | ||||||||| ||||| ||| Sbjct 4619 AGCGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAAATCAGACGCTGCTGATCCGGGGGG 4678 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||||| | || | ||||| | ||||||| Sbjct 4679 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTATCAGAAGACTCGACC 4738 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236 |||| ||| | ||| || || || || || || |||||||||||||||| Sbjct 4739 TCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTGACGAAAATCTGCATGA 4787 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||||||||| | |||||||| | || | ||||||||||| ||||||||||| || Sbjct 4330 GCCACCGCGGAGCCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCCGA 4389 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| || ||||| ||||||||||| ||| | || | ||||||||||| || || Sbjct 4390 AAGGGTCCGTCCATCCTCAAGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCGGGTGG 4449 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| ||| || ||||| | || | || || | ||||||| Sbjct 4450 GATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTATCGATGGTGTCCGACGACTCGAC 4509 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || || || || ||||| |||||||| Sbjct 4510 CTCCAGAGTGATGGTCTTGCCAGTCAGCGTCTTGACGAAGATCTGCAT 4557 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | |||||||| | || | ||||| ||||| || |||||||| || Sbjct 4103 CCACCACGGAGCCGCAGCACCAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAGTCCGAT 4162 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| | ||||||||| ||| |||| | ||||||||||| || ||| Sbjct 4163 AGCGTGCGGCCATCCTCCAACTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCTGGCGGG 4222 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| |||||| ||| | | || | || || | ||||| | Sbjct 4223 ATGCCCTCCTTGTCCTGGATTTTAGACTTCACATTGTCAATCGTGTCCGACGACTCCACC 4282 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||| | || || || || || || |||||||||||||||||| Sbjct 4283 TCCAGGGTGATCGTCTTGCCCGTAAGCGTCTTTACGAAAATCTGCATG 4330 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || |||| ||| ||||| | || | ||||| ||||| || || ||||| || Sbjct 3874 GCCGCCACGCAGACGAAGCACCAGGTGCAGCGTCGATTCCTTCTGGATATTGTAGTCCGA 3933 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| |||||| ||||||||||| || | || | ||||||||||| || || Sbjct 3934 GAGGGTGCGGCCGTCCTCCAGCTGCTTGCCCGCAAAAATGAGCCGCTGCTGGTCTGGGGG 3993 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| || ||| ||| | | || | ||||| | ||||| | Sbjct 3994 AATGCCCTCCTTGTCCTGAATCTTCGACTTCACGTTGTCAATCGTATCTGATGACTCAAC 4053 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| || || || || || || || |||||||||||||| Sbjct 4054 CTCCAAGGTAATCGTCTTCCCTGTCAGCGTCTTGACGAAAATCTGCAT 4101 >seq1920 Length=25525 Score = 122 bits (134), Expect = 8e-23 Identities = 168/235 (71%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 131004 TGAGCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATC 131063 || |||||| || | || ||||| | || | || |||||| || ||||||||||| Sbjct 16715 TGCGCCACCACGGAGCCGTAGCACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAATC 16774 Query 131064 GCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGG 131123 | | || || || |||||||||||||| ||| |||| || ||||||||||| || Sbjct 16775 GGAGAGAGTCCGTCCATCTTCTAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGG 16834 Query 131124 AGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTC 131183 ||||| || || ||||| ||| || ||||| | || | ||| ||| || ||| Sbjct 16835 CGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGCTGCTCTC 16894 Query 131184 GATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 || || | ||||| || ||||| || || ||||| ||||| ||||||||| || Sbjct 16895 GACCTCAAGGGTAATTGTCTTACCCGTGAGGGTTTTCACGAAGATCTGCATGGCT 16949 >seq1979 Length=23555 Score = 105 bits (116), Expect = 6e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || ||||| | || | ||||||||||| || || ||||| || | Sbjct 2775 CCACCACGCAGGCGGAGCACCAGGTGCAGAGTCGACTCCTTCTGGATATTGTAGTCAGAC 2834 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || |||||| ||||||||||| || |||| | ||||||||||| || ||| Sbjct 2835 AGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCGGGCGGG 2894 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || || | |||||||| Sbjct 2895 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACC 2954 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAA 131225 || | ||| | ||| || || || || || || ||||| Sbjct 2955 TCCAAGGTGATGGTCTTGCCCGTAAGGGTCTTCACGAA 2992 >seq2400 Length=47555 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 10/229 (4%) Strand=Plus/Plus Query 46087 CCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACT 46146 || ||| | |||||||| |||| ||||| | ||||||||| ||| ||||||| | Sbjct 7429 CCTTGCATCCGCAAGAAGGCCGATTGGGCTCTCAAGTGGATCT----CAG-ACCGCGAGT 7483 Query 46147 -----TTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCA 46201 || || |||| |||| || ||||| |||||||||| |||| || || Sbjct 7484 CCACCTTTGCTCAGCGCCTGGTCGCTTTTGCCGCTGTGGAGGGCATCTTCTTCAGCGGTG 7543 Query 46202 GTTTTGCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCA 46261 || | ||||||| | | || | ||| | ||||| |||||||| || || Sbjct 7544 CCTTCTCTTCCATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCTGGCCTGACCTTCTCCA 7603 Query 46262 ACGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCT 46310 ||||||| || || || |||||||||||||| || ||||| || || || Sbjct 7604 ACGAGCTTATTTCTCGTGACGAGGGCCTGCACACCGACTTCGCTTGCCT 7652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471996946270080