Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12-
22] 2,687 sequences; 28,556,450 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq2494 174 1e-38
seq2379 134 1e-26
seq1920 122 8e-23
seq1979 105 6e-18
seq2400 84.2 2e-11
>seq2494
Length=11727
Score = 174 bits (192), Expect = 1e-38
Identities = 609/941 (65%), Gaps = 30/941 (3%)
Strand=Plus/Minus
Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117
||||| |||||||||||||| |||| |||||| ||| | || | ||| |||||| | ||
Sbjct 3081 TTGACAACCTGAAACTCGCCCGCCAGCACACGGCGCGAGTAGATGTTGGACGTGTACGGC 3022
Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177
|| || | ||||| ||||||||||| || | |||| || || |||||| ||||||
Sbjct 3021 TCGAAGCATTCGTTGTTGCCCAGGATCTGCGACGTCGACGCTGTTGGCATGGGGGCCACC 2962
Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTC--CTTTAGCGTACCCCAATCCC 145235
|| | ||||| | |||||||| ||||| ||||| |||| |||| ||||
Sbjct 2961 AACAGACTGTTGCGGACGCCGTGCTCCTTGA--TCTTCAGACGGAGCGAGTCCCAGTCCC 2904
Query 145236 ATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGC 145295
| || || |||| ||||||||||||||||| ||||| ||| |||| | ||
Sbjct 2903 ACAGGTCAGACGGCTTCACGTCCCACATGTCGGGCTGCAGAATTCCCTGAGACACAGGAG 2844
Query 145296 TGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGCCTCCAGAG 145355
||| | | | | || ||||| | | | ||| || ||||| ||| ||||
Sbjct 2843 AGCCCTCATACGTCGCATAGGTGCCCTCAATCTGGGCCAGGTCGCACGACGCAGTGAGAG 2784
Query 145356 CGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGT 145415
|| || || || ||||| |||||| |||||||| | || || |||
Sbjct 2783 CGGCGTGGTAGATGGTCTCAAAGATTTGCTTGTTGAGCTCCCGTGCCTCGGGCGACTCAA 2724
Query 145416 ACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCC 145475
| |||||||||||| | |||||||| || |||||||| | |||| || || || |
Sbjct 2723 AGGGCATGCGCAGCGCCAGGAAAGCATCTGCCAGCCCCTGCACACCCAAACCAATAGGAC 2664
Query 145476 GATGTTTCATGTTGCTCATCCTCG----CCGACTCGATAGGATA-TCGATTACGGTCGAT 145530
| || ||||||||| | |||| ||| | || || || | | | || || ||
Sbjct 2663 GGTGGCGCATGTTGCT-GTTCTCGGCCTCCGGCACG---GGGTAGTAGTTGAC-ATCAAT 2609
Query 145531 AATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAA 145590
|| |||| ||| || || | | || || || | | | ||| | ||||| |
Sbjct 2608 GATGCGGTTCAGGTTGCGGACAAGCAGCTGTGCAACCTCGTGGAGCTTCTTGAAGTCGTA 2549
Query 145591 CCGAGCCTCGTCAACGACCACACAGCTATTGACG-----GCGATCGACGCCAAATTACAA 145645
| | ||||| | | || | | |||| || | || || | || ||
Sbjct 2548 C---GTCTCGTTGTTG--TAGTCAACAAAAGACGGCAGTGCTAGGGAAGCTAGGTTGCAC 2494
Query 145646 ACTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTG 145705
|| || ||| || | | ||||| | || ||||| | |||||| ||| | |
Sbjct 2493 ACAGCAACCTCATCCGGTGCACTGTACTCCACAATCTCCGTGCACAAGTTGGAGCTGCGG 2434
Query 145706 ATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTAC 145765
||||| || || || | ||| || || || | ||| || |||||||||||||||| ||
Sbjct 2433 ATGGTGCCTAGGTTCTTCTGGTTGCTCTTGCGGTTACAGTGGTCCTTGTAGAGCATGAAC 2374
Query 145766 GGTCCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCAAG---TCCTGCGCACGC 145822
|| ||| |||||| ||| | || ||| || || | || | ||| ||
Sbjct 2373 GGATTGCCCGTCTCCGTCTGAG---CCTCGAGAACTGCGTACCAGAGCTTCTGGGCCTTG 2317
Query 145823 ACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAA 145882
|||| | || || || || ||||| ||| || || |||||||| ||
Sbjct 2316 ACCTTTTTGCGGCCACGACCTTCGCGCTCGTACTTCTCATACAGGGCCTCAAACTCGTCG 2257
Query 145883 CCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTG 145942
|||||| || | ||| |||||||||| |||||| |||||||||| ||| |||||||
Sbjct 2256 CCGTAGACGTCCGCCAGACCGGGACACTCGTTGGGGCACATCAGCGTCCACTCGCCGTTC 2197
Query 145943 GCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGC 145983
| || |||| ||| |||| ||| || | ||| |||||
Sbjct 2196 TTCTCAACCCGCTTCATGAACAGATCAGGGATCCAGAGCGC 2156
>seq2379
Length=13478
Score = 134 bits (148), Expect = 1e-26
Identities = 167/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || |||| |||||| || | ||| | ||| |||||||| || ||||||||||||
Sbjct 4559 CCGCCACGCAGACGCAGGACGAGATGCAGGGTGGACTCCTTCTGGATGTTGTAATCGGAG 4618
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| |||||| |||||||| || || | || | ||||||||| ||||| |||
Sbjct 4619 AGCGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAAATCAGACGCTGCTGATCCGGGGGG 4678
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| || || ||||| | || | ||||| | |||||||
Sbjct 4679 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTATCAGAAGACTCGACC 4738
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236
|||| ||| | ||| || || || || || || ||||||||||||||||
Sbjct 4739 TCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTGACGAAAATCTGCATGA 4787
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||||||||| | |||||||| | || | ||||||||||| ||||||||||| ||
Sbjct 4330 GCCACCGCGGAGCCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCCGA 4389
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| ||| || ||||| ||||||||||| ||| | || | ||||||||||| || ||
Sbjct 4390 AAGGGTCCGTCCATCCTCAAGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCGGGTGG 4449
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| || || ||||| ||| || ||||| | || | || || | |||||||
Sbjct 4450 GATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTATCGATGGTGTCCGACGACTCGAC 4509
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||| || || || || || || ||||| ||||||||
Sbjct 4510 CTCCAGAGTGATGGTCTTGCCAGTCAGCGTCTTGACGAAGATCTGCAT 4557
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | |||||||| | || | ||||| ||||| || |||||||| ||
Sbjct 4103 CCACCACGGAGCCGCAGCACCAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAGTCCGAT 4162
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||||| | ||||||||| ||| |||| | ||||||||||| || |||
Sbjct 4163 AGCGTGCGGCCATCCTCCAACTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCTGGCGGG 4222
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| |||||| ||| | | || | || || | ||||| |
Sbjct 4223 ATGCCCTCCTTGTCCTGGATTTTAGACTTCACATTGTCAATCGTGTCCGACGACTCCACC 4282
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|| | ||| | || || || || || || ||||||||||||||||||
Sbjct 4283 TCCAGGGTGATCGTCTTGCCCGTAAGCGTCTTTACGAAAATCTGCATG 4330
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||| || |||| ||| ||||| | || | ||||| ||||| || || ||||| ||
Sbjct 3874 GCCGCCACGCAGACGAAGCACCAGGTGCAGCGTCGATTCCTTCTGGATATTGTAGTCCGA 3933
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| |||||| |||||| ||||||||||| || | || | ||||||||||| || ||
Sbjct 3934 GAGGGTGCGGCCGTCCTCCAGCTGCTTGCCCGCAAAAATGAGCCGCTGCTGGTCTGGGGG 3993
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| || || ||||| || ||| ||| | | || | ||||| | ||||| |
Sbjct 3994 AATGCCCTCCTTGTCCTGAATCTTCGACTTCACGTTGTCAATCGTATCTGATGACTCAAC 4053
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||||| || || || || || || || ||||||||||||||
Sbjct 4054 CTCCAAGGTAATCGTCTTCCCTGTCAGCGTCTTGACGAAAATCTGCAT 4101
>seq1920
Length=25525
Score = 122 bits (134), Expect = 8e-23
Identities = 168/235 (71%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 131004 TGAGCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATC 131063
|| |||||| || | || ||||| | || | || |||||| || |||||||||||
Sbjct 16715 TGCGCCACCACGGAGCCGTAGCACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAATC 16774
Query 131064 GCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGG 131123
| | || || || |||||||||||||| ||| |||| || ||||||||||| ||
Sbjct 16775 GGAGAGAGTCCGTCCATCTTCTAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGG 16834
Query 131124 AGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTC 131183
||||| || || ||||| ||| || ||||| | || | ||| ||| || |||
Sbjct 16835 CGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGCTGCTCTC 16894
Query 131184 GATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238
|| || | ||||| || ||||| || || ||||| ||||| ||||||||| ||
Sbjct 16895 GACCTCAAGGGTAATTGTCTTACCCGTGAGGGTTTTCACGAAGATCTGCATGGCT 16949
>seq1979
Length=23555
Score = 105 bits (116), Expect = 6e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| || ||||| | || | ||||||||||| || || ||||| || |
Sbjct 2775 CCACCACGCAGGCGGAGCACCAGGTGCAGAGTCGACTCCTTCTGGATATTGTAGTCAGAC 2834
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || |||||| ||||||||||| || |||| | ||||||||||| || |||
Sbjct 2835 AGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCGGGCGGG 2894
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | || | || || | ||||||||
Sbjct 2895 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACC 2954
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAA 131225
|| | ||| | ||| || || || || || || |||||
Sbjct 2955 TCCAAGGTGATGGTCTTGCCCGTAAGGGTCTTCACGAA 2992
>seq2400
Length=47555
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/229 (69%), Gaps = 10/229 (4%)
Strand=Plus/Plus
Query 46087 CCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACT 46146
|| ||| | |||||||| |||| ||||| | ||||||||| ||| ||||||| |
Sbjct 7429 CCTTGCATCCGCAAGAAGGCCGATTGGGCTCTCAAGTGGATCT----CAG-ACCGCGAGT 7483
Query 46147 -----TTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCA 46201
|| || |||| |||| || ||||| |||||||||| |||| || ||
Sbjct 7484 CCACCTTTGCTCAGCGCCTGGTCGCTTTTGCCGCTGTGGAGGGCATCTTCTTCAGCGGTG 7543
Query 46202 GTTTTGCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCA 46261
|| | ||||||| | | || | ||| | ||||| |||||||| || ||
Sbjct 7544 CCTTCTCTTCCATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCTGGCCTGACCTTCTCCA 7603
Query 46262 ACGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCT 46310
||||||| || || || |||||||||||||| || ||||| || || ||
Sbjct 7604 ACGAGCTTATTTCTCGTGACGAGGGCCTGCACACCGACTTCGCTTGCCT 7652
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471996946270080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |