Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12-
22] 2,687 sequences; 28,556,450 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq2379 96.9 3e-15
>seq2379
Length=13478
Score = 96.9 bits (106), Expect = 3e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || |||||||| | || || || | ||||| | || |||||||||||
Sbjct 4329 ATGCAGATTTTCGTAAAGACGCTTACGGGCAAGACGATCACCCTGGAGGTGGAGTCGTCG 4270
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| || || ||||| |||||| ||||| || || || || || |||||
Sbjct 4269 GACACGATTGACAATGTGAAGTCTAAAATCCAGGACAAGGAGGGCATCCCGCCAGACCAG 4210
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| |||| || || ||||| || || || |||| ||||| | || |||||
Sbjct 4209 CAGCGCCTTATCTTCGCTGGCAAGCAGTTGGAGGATGGCCGCACGCTATCGGACTACAAC 4150
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216
|| || || ||||| || || || | ||||| ||||
Sbjct 4149 ATCCAGAAGGAATCGACTCTTCACCTGGTGCTGCGGCT 4112
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/213 (69%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| | || || || ||||||| |||| || ||||| |||
Sbjct 4785 ATGCAGATTTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTCGAGTCTTCT 4726
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|| || ||||| | ||| | || | ||| ||||| || || || || || || ||
Sbjct 4725 GATACCATCGACAACGTCAAGTCCAAGATTCAG-GACAAGGAGGGCATCCCCCCGGATCA 4667
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||||| | ||||||||||| || || | || || | ||||| | |||||||||
Sbjct 4666 GCAGCGTCTGATTTTTGCCGGAAAGCAGCTCGAGGACGGCCGCACGCTCTCCGATTACAA 4607
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| || || || ||||| || ||| | || ||
Sbjct 4606 CATCCAGAAGGAGTCCACCCTGCATCTCGTCCT 4574
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433313809455905
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |