Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12- 22] 2,687 sequences; 28,556,450 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq2379 96.9 3e-15 >seq2379 Length=13478 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || |||||||| | || || || | ||||| | || ||||||||||| Sbjct 4329 ATGCAGATTTTCGTAAAGACGCTTACGGGCAAGACGATCACCCTGGAGGTGGAGTCGTCG 4270 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || ||||| |||||| ||||| || || || || || ||||| Sbjct 4269 GACACGATTGACAATGTGAAGTCTAAAATCCAGGACAAGGAGGGCATCCCGCCAGACCAG 4210 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| |||| || || ||||| || || || |||| ||||| | || ||||| Sbjct 4209 CAGCGCCTTATCTTCGCTGGCAAGCAGTTGGAGGATGGCCGCACGCTATCGGACTACAAC 4150 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 || || || ||||| || || || | ||||| |||| Sbjct 4149 ATCCAGAAGGAATCGACTCTTCACCTGGTGCTGCGGCT 4112 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || || ||||||| |||| || ||||| ||| Sbjct 4785 ATGCAGATTTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTCGAGTCTTCT 4726 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || ||||| | ||| | || | ||| ||||| || || || || || || || Sbjct 4725 GATACCATCGACAACGTCAAGTCCAAGATTCAG-GACAAGGAGGGCATCCCCCCGGATCA 4667 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | ||||||||||| || || | || || | ||||| | ||||||||| Sbjct 4666 GCAGCGTCTGATTTTTGCCGGAAAGCAGCTCGAGGACGGCCGCACGCTCTCCGATTACAA 4607 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || ||||| || ||| | || || Sbjct 4606 CATCCAGAAGGAGTCCACCCTGCATCTCGTCCT 4574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433313809455905