Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12-
22] 2,687 sequences; 28,556,450 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq2400 116 8e-21
seq412 100 6e-16
seq2387 87.8 4e-12
seq2424 86.0 1e-11
seq2180 86.0 1e-11
seq2042 86.0 1e-11
seq1490 86.0 1e-11
seq845 86.0 1e-11
seq756 86.0 1e-11
>seq2400
Length=47555
Score = 116 bits (128), Expect = 8e-21
Identities = 313/471 (66%), Gaps = 12/471 (3%)
Strand=Plus/Minus
Query 251526 CATCACACCTGGACGT-TGATATTCAGATACACGGCGTTCGAAGAAATTAGACTTGCCCT 251584
||||||||| || | | || || ||| ||||| |||||||| || | ||||||
Sbjct 7953 CATCACACC-GGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAC 7895
Query 251585 CCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTGGCATTGTACTGCTTGGGATGGC 251644
|||| ||||| ||||||||||||||||||||| |||| | |||| ||| || ||
Sbjct 7894 CCAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGAACGGTACACCTTATCATTGC 7835
Query 251645 CAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGATACTGTCCCATCAGTTCAGAGT 251704
| || || || | | |||||| || || ||||| | ||||| ||| ||| ||||
Sbjct 7834 CGAGGGCAACCAGAAGGCGGTCGGCAACGAACTCAATGTACTGCTTCATGAGTGTGGAGT 7775
Query 251705 TCATGCCAATCATACGACAAGGAATTGCCTCACAGATGAATTCCTTTTCGTTGGCAACTG 251764
||||||| | || | || |||| ||||| || ||| |||| || | || |
Sbjct 7774 TCATGCCGAGCAGAGCGCAGGGAAGGGCCTCGGTGAGGAACTCCTGCTCAATCTTGACAG 7715
Query 251765 CCTCCTCCACAATTGCCT---TCACCT-GTGCCAGAGACAGCTTGTTCTCCAGCTTTGAG 251820
| || | | || ||| ||| || | | | | | ||||| ||| | |||
Sbjct 7714 CATCGACGATTATCTCCTGGATCATCTCCTTGCTGGGGC----GGTTCTTCAGATGAGAG 7659
Query 251821 TACAGGA-GCTCGCCAAACTGTTGGTGCAGACCCTCGTCGCGACTGATGAACTCGTTGGA 251879
|||| | || || || | | |||||| |||||||| ||| || | |||||||||
Sbjct 7658 AACAGCAGGCAAGCGAAGTCGGT-GTGCAGGCCCTCGTCACGAGAAATAAGCTCGTTGGA 7600
Query 251880 CAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGAAGATTGCGCAAAAGGATCC 251939
| |||||||||||||| || || ||| | ||||||||||| | | |||| ||
Sbjct 7599 GAAGGTCAGGCCAGGCATCAGGCCGCGCTTCTTCAGCCAGAAGATGGAAGAGAAGGCACC 7540
Query 251940 AGAGAACAGCAGACCCTCGACACACACCCATGCAACAAGGCGCTCAGCAAA 251990
||| | | ||||| ||| | | || || ||||||| ||||||
Sbjct 7539 GCTGAAGAAGATGCCCTCCACAGCGGCAAAAGCGACCAGGCGCTGAGCAAA 7489
>seq412
Length=36669
Score = 100 bits (110), Expect = 6e-16
Identities = 115/152 (76%), Gaps = 2/152 (1%)
Strand=Plus/Minus
Query 280672 CCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAG 280731
|||| | || ||||| ||||| | | ||||||| ||||| |||||||| ||||| |
Sbjct 27001 CCAACTTCGGCCTGGATGCCGAGCTGATCTCTCACTCGCGCATGCGCGGTCTGTCTGGTG 26942
Query 280732 GCCAGAAGGTCAAACTTGTCATCGGAGCA-GCTCTGTGGCAACACCCTCACGTGATCGTT 280790
||||| ||||| |||| | | || |||| |||||||| ||| || |||||||
Sbjct 26941 GCCAGCGTGTCAAGGTTGTGCTTGCCGCGTGCTC-GTGGCAACGCCCCCATCTGATCGTC 26883
Query 280791 CTCGACGAGCCTACCAACTATCTGGACCGCGA 280822
|| ||||||||||||||||| ||||| || ||
Sbjct 26882 CTGGACGAGCCTACCAACTACCTGGATCGTGA 26851
Score = 96.9 bits (106), Expect = 7e-15
Identities = 156/222 (70%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404
|| ||||||||||| |||| |||||||| || || |||| ||||| ||||| |||
Sbjct 28373 GGCGAGGATCTGTGCAACTGCACGTTCTCGCTTGCCTACGGTGCCAAGATCCTGCTGAAC 28314
Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464
|| |||| | | ||||||||| | || || || || ||||||||| || |
Sbjct 28313 CAGACTAGCCTGCGCCTGAAGCGTGGCCAGCGCTACGGCCTGTGCGGTCCCAACGGTTCC 28254
Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524
|| ||| ||||| ||||||||||| |||| ||| | | ||| ||||| | |||
Sbjct 28253 GGCAAGTCTACTCTGATGCGCGCCATCAACAACGAGCAGGTCG-AGGGTTTCCCCAAGCA 28195
Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565
|| || | ||| |||| ||| ||||||||| | |||||
Sbjct 28194 GAGCGAAGTCAAGACCGTGTTTGTCGAGCACGACCTGGACTC 28153
>seq2387
Length=13501
Score = 87.8 bits (96), Expect = 4e-12
Identities = 155/226 (69%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 279696 GTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTG 279755
|| || || ||||||||||| ||||||||||||||||| || | ||||| || || | |
Sbjct 8433 GTCGGCTCGCTGTCGGGTGGATGGAAGATGAAGCTGGCTCTGGCGCGCGCGATGCTGCAG 8492
Query 279756 CGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCC 279815
|| || || || ||||| || || || || || ||| ||||| | | ||| | |
Sbjct 8493 AAGGCTGACGTGCTGCTGCTGGACGAACCGACGAATCACCTGGACGTCGCGAACATCCGC 8552
Query 279816 TGGCTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGAC 279875
||||| | | |||||| | | | || | || | ||| || || || ||||||
Sbjct 8553 TGGCTCGAGAACTACCTCAAGACGCACAACGAGGTGACCAGCCTGATCGTGTCCCACGAC 8612
Query 279876 TCTGGCTTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAGC 279921
|| |||||||| || | ||| | | | |||| ||||| ||||
Sbjct 8613 TCCGGCTTCCTGGACGAGGTGACCACGGACATCTACCACTACGAGC 8658
Score = 87.8 bits (96), Expect = 4e-12
Identities = 132/185 (71%), Gaps = 2/185 (1%)
Strand=Plus/Plus
Query 280174 TCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCC 280233
|||| || || || ||||| || ||||| || || ||||| | || || ||||||||
Sbjct 8914 TCATCGGGCCGAACGGTGCCGGAAAGTCGACGCTCATCAAGCTGCTCACCGGCGAGACG- 8972
Query 280234 AGGCCACTGAGGGGTCCGTTTG-GAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAG 280292
| || ||| || | | | |||||| |||||| ||||||| | ||| || |||
Sbjct 8973 ATCCCGTCGAGCGGCAAGGTGGAGAAGCACCCCAACCTGCGGATCGGCTACATCAAGCAG 9032
Query 280293 CACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGG 280352
||||| | | ||| | |||| |||||||| | ||| || ||||| ||| | ||||||
Sbjct 9033 CACGCCCTGGAGCACGTGGAGATGCACCTGGAGAAGACGCCCAACCAGTACCTGCAGTGG 9092
Query 280353 CGCTA 280357
|||||
Sbjct 9093 CGCTA 9097
>seq2424
Length=12890
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||||||||||| ||||||||||| ||||||||||||| ||| | |||||||| |
Sbjct 10106 GCCCGGTTAGCTCAATCGGTAGAGCGTGAGACTCTTAATCTCAAGGTTGCGGGTTCGACC 10165
Query 142564 CCCACATCGGGC 142575
||| ||||||||
Sbjct 10166 CCCGCATCGGGC 10177
>seq2180
Length=17456
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||||||||||| ||||||||||| ||||||||||||| ||| | |||||||| |
Sbjct 16119 GCCCGGTTAGCTCAATCGGTAGAGCGTGAGACTCTTAATCTCAAGGTTGCGGGTTCGACC 16178
Query 142564 CCCACATCGGGC 142575
||| ||||||||
Sbjct 16179 CCCGCATCGGGC 16190
>seq2042
Length=21177
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||||||||||| ||||||||||| ||||||||||||| ||| | |||||||| |
Sbjct 7455 GCCCGGTTAGCTCAATCGGTAGAGCGTGAGACTCTTAATCTCAAGGTTGCGGGTTCGACC 7396
Query 142564 CCCACATCGGGC 142575
||| ||||||||
Sbjct 7395 CCCGCATCGGGC 7384
>seq1490
Length=29145
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||||||||||| ||||||||||| ||||||||||||| ||| | |||||||| |
Sbjct 22206 GCCCGGTTAGCTCAATCGGTAGAGCGTGAGACTCTTAATCTCAAGGTTGCGGGTTCGACC 22147
Query 142564 CCCACATCGGGC 142575
||| ||||||||
Sbjct 22146 CCCGCATCGGGC 22135
>seq845
Length=33540
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||||||||||| ||||||||||| ||||||||||||| ||| | |||||||| |
Sbjct 14373 GCCCGGTTAGCTCAATCGGTAGAGCGTGAGACTCTTAATCTCAAGGTTGCGGGTTCGACC 14432
Query 142564 CCCACATCGGGC 142575
||| ||||||||
Sbjct 14433 CCCGCATCGGGC 14444
>seq756
Length=34073
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||||||||||| ||||||||||| ||||||||||||| ||| | |||||||| |
Sbjct 76 GCCCGGTTAGCTCAATCGGTAGAGCGTGAGACTCTTAATCTCAAGGTTGCGGGTTCGACC 17
Query 142564 CCCACATCGGGC 142575
||| ||||||||
Sbjct 16 CCCGCATCGGGC 5
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027801414469767
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |