Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12- 22] 2,687 sequences; 28,556,450 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq2400 116 8e-21 seq412 100 6e-16 seq2387 87.8 4e-12 seq2424 86.0 1e-11 seq2180 86.0 1e-11 seq2042 86.0 1e-11 seq1490 86.0 1e-11 seq845 86.0 1e-11 seq756 86.0 1e-11 >seq2400 Length=47555 Score = 116 bits (128), Expect = 8e-21 Identities = 313/471 (66%), Gaps = 12/471 (3%) Strand=Plus/Minus Query 251526 CATCACACCTGGACGT-TGATATTCAGATACACGGCGTTCGAAGAAATTAGACTTGCCCT 251584 ||||||||| || | | || || ||| ||||| |||||||| || | |||||| Sbjct 7953 CATCACACC-GGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAC 7895 Query 251585 CCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTGGCATTGTACTGCTTGGGATGGC 251644 |||| ||||| ||||||||||||||||||||| |||| | |||| ||| || || Sbjct 7894 CCAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGAACGGTACACCTTATCATTGC 7835 Query 251645 CAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGATACTGTCCCATCAGTTCAGAGT 251704 | || || || | | |||||| || || ||||| | ||||| ||| ||| |||| Sbjct 7834 CGAGGGCAACCAGAAGGCGGTCGGCAACGAACTCAATGTACTGCTTCATGAGTGTGGAGT 7775 Query 251705 TCATGCCAATCATACGACAAGGAATTGCCTCACAGATGAATTCCTTTTCGTTGGCAACTG 251764 ||||||| | || | || |||| ||||| || ||| |||| || | || | Sbjct 7774 TCATGCCGAGCAGAGCGCAGGGAAGGGCCTCGGTGAGGAACTCCTGCTCAATCTTGACAG 7715 Query 251765 CCTCCTCCACAATTGCCT---TCACCT-GTGCCAGAGACAGCTTGTTCTCCAGCTTTGAG 251820 | || | | || ||| ||| || | | | | | ||||| ||| | ||| Sbjct 7714 CATCGACGATTATCTCCTGGATCATCTCCTTGCTGGGGC----GGTTCTTCAGATGAGAG 7659 Query 251821 TACAGGA-GCTCGCCAAACTGTTGGTGCAGACCCTCGTCGCGACTGATGAACTCGTTGGA 251879 |||| | || || || | | |||||| |||||||| ||| || | ||||||||| Sbjct 7658 AACAGCAGGCAAGCGAAGTCGGT-GTGCAGGCCCTCGTCACGAGAAATAAGCTCGTTGGA 7600 Query 251880 CAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGAAGATTGCGCAAAAGGATCC 251939 | |||||||||||||| || || ||| | ||||||||||| | | |||| || Sbjct 7599 GAAGGTCAGGCCAGGCATCAGGCCGCGCTTCTTCAGCCAGAAGATGGAAGAGAAGGCACC 7540 Query 251940 AGAGAACAGCAGACCCTCGACACACACCCATGCAACAAGGCGCTCAGCAAA 251990 ||| | | ||||| ||| | | || || ||||||| |||||| Sbjct 7539 GCTGAAGAAGATGCCCTCCACAGCGGCAAAAGCGACCAGGCGCTGAGCAAA 7489 >seq412 Length=36669 Score = 100 bits (110), Expect = 6e-16 Identities = 115/152 (76%), Gaps = 2/152 (1%) Strand=Plus/Minus Query 280672 CCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAG 280731 |||| | || ||||| ||||| | | ||||||| ||||| |||||||| ||||| | Sbjct 27001 CCAACTTCGGCCTGGATGCCGAGCTGATCTCTCACTCGCGCATGCGCGGTCTGTCTGGTG 26942 Query 280732 GCCAGAAGGTCAAACTTGTCATCGGAGCA-GCTCTGTGGCAACACCCTCACGTGATCGTT 280790 ||||| ||||| |||| | | || |||| |||||||| ||| || ||||||| Sbjct 26941 GCCAGCGTGTCAAGGTTGTGCTTGCCGCGTGCTC-GTGGCAACGCCCCCATCTGATCGTC 26883 Query 280791 CTCGACGAGCCTACCAACTATCTGGACCGCGA 280822 || ||||||||||||||||| ||||| || || Sbjct 26882 CTGGACGAGCCTACCAACTACCTGGATCGTGA 26851 Score = 96.9 bits (106), Expect = 7e-15 Identities = 156/222 (70%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 || ||||||||||| |||| |||||||| || || |||| ||||| ||||| ||| Sbjct 28373 GGCGAGGATCTGTGCAACTGCACGTTCTCGCTTGCCTACGGTGCCAAGATCCTGCTGAAC 28314 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 || |||| | | ||||||||| | || || || || ||||||||| || | Sbjct 28313 CAGACTAGCCTGCGCCTGAAGCGTGGCCAGCGCTACGGCCTGTGCGGTCCCAACGGTTCC 28254 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 || ||| ||||| ||||||||||| |||| ||| | | ||| ||||| | ||| Sbjct 28253 GGCAAGTCTACTCTGATGCGCGCCATCAACAACGAGCAGGTCG-AGGGTTTCCCCAAGCA 28195 Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565 || || | ||| |||| ||| ||||||||| | ||||| Sbjct 28194 GAGCGAAGTCAAGACCGTGTTTGTCGAGCACGACCTGGACTC 28153 >seq2387 Length=13501 Score = 87.8 bits (96), Expect = 4e-12 Identities = 155/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 279696 GTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTG 279755 || || || ||||||||||| ||||||||||||||||| || | ||||| || || | | Sbjct 8433 GTCGGCTCGCTGTCGGGTGGATGGAAGATGAAGCTGGCTCTGGCGCGCGCGATGCTGCAG 8492 Query 279756 CGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCC 279815 || || || || ||||| || || || || || ||| ||||| | | ||| | | Sbjct 8493 AAGGCTGACGTGCTGCTGCTGGACGAACCGACGAATCACCTGGACGTCGCGAACATCCGC 8552 Query 279816 TGGCTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGAC 279875 ||||| | | |||||| | | | || | || | ||| || || || |||||| Sbjct 8553 TGGCTCGAGAACTACCTCAAGACGCACAACGAGGTGACCAGCCTGATCGTGTCCCACGAC 8612 Query 279876 TCTGGCTTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAGC 279921 || |||||||| || | ||| | | | |||| ||||| |||| Sbjct 8613 TCCGGCTTCCTGGACGAGGTGACCACGGACATCTACCACTACGAGC 8658 Score = 87.8 bits (96), Expect = 4e-12 Identities = 132/185 (71%), Gaps = 2/185 (1%) Strand=Plus/Plus Query 280174 TCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCC 280233 |||| || || || ||||| || ||||| || || ||||| | || || |||||||| Sbjct 8914 TCATCGGGCCGAACGGTGCCGGAAAGTCGACGCTCATCAAGCTGCTCACCGGCGAGACG- 8972 Query 280234 AGGCCACTGAGGGGTCCGTTTG-GAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAG 280292 | || ||| || | | | |||||| |||||| ||||||| | ||| || ||| Sbjct 8973 ATCCCGTCGAGCGGCAAGGTGGAGAAGCACCCCAACCTGCGGATCGGCTACATCAAGCAG 9032 Query 280293 CACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGG 280352 ||||| | | ||| | |||| |||||||| | ||| || ||||| ||| | |||||| Sbjct 9033 CACGCCCTGGAGCACGTGGAGATGCACCTGGAGAAGACGCCCAACCAGTACCTGCAGTGG 9092 Query 280353 CGCTA 280357 ||||| Sbjct 9093 CGCTA 9097 >seq2424 Length=12890 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||||||||||| ||||||||||| ||||||||||||| ||| | |||||||| | Sbjct 10106 GCCCGGTTAGCTCAATCGGTAGAGCGTGAGACTCTTAATCTCAAGGTTGCGGGTTCGACC 10165 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 10166 CCCGCATCGGGC 10177 >seq2180 Length=17456 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||||||||||| ||||||||||| ||||||||||||| ||| | |||||||| | Sbjct 16119 GCCCGGTTAGCTCAATCGGTAGAGCGTGAGACTCTTAATCTCAAGGTTGCGGGTTCGACC 16178 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 16179 CCCGCATCGGGC 16190 >seq2042 Length=21177 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||||||||||| ||||||||||| ||||||||||||| ||| | |||||||| | Sbjct 7455 GCCCGGTTAGCTCAATCGGTAGAGCGTGAGACTCTTAATCTCAAGGTTGCGGGTTCGACC 7396 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 7395 CCCGCATCGGGC 7384 >seq1490 Length=29145 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||||||||||| ||||||||||| ||||||||||||| ||| | |||||||| | Sbjct 22206 GCCCGGTTAGCTCAATCGGTAGAGCGTGAGACTCTTAATCTCAAGGTTGCGGGTTCGACC 22147 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 22146 CCCGCATCGGGC 22135 >seq845 Length=33540 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||||||||||| ||||||||||| ||||||||||||| ||| | |||||||| | Sbjct 14373 GCCCGGTTAGCTCAATCGGTAGAGCGTGAGACTCTTAATCTCAAGGTTGCGGGTTCGACC 14432 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 14433 CCCGCATCGGGC 14444 >seq756 Length=34073 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||||||||||| ||||||||||| ||||||||||||| ||| | |||||||| | Sbjct 76 GCCCGGTTAGCTCAATCGGTAGAGCGTGAGACTCTTAATCTCAAGGTTGCGGGTTCGACC 17 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 16 CCCGCATCGGGC 5 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027801414469767