Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12-
22] 2,687 sequences; 28,556,450 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq2379 87.8 2e-12
seq1920 82.4 6e-11
>seq2379
Length=13478
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | || || | || | || ||||| || || |||||||| ||
Sbjct 4100 ATACCACCACGGAGCCGCAGCACCAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAGTCC 4159
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || || ||| || | || || |||||| |||| || ||||| ||||| ||
Sbjct 4160 GATAGCGTGCGGCCATCCTCCAACTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCTGGC 4219
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| ||||| || ||||| || || || | | |||| ||||| | || ||
Sbjct 4220 GGGATGCCCTCCTTGTCCTGGATTTTAGACTTCACATTGTCAATCGTGTCCGACGACTCC 4279
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
|| |||| ||| | ||| ||||| || || || ||||| ||||||||||||
Sbjct 4280 ACCTCCAGGGTGATCGTCTTGCCCGTAAGCGTCTTTACGAAAATCTGCATG 4330
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||||||||| || | || || | ||| | || || || || || ||||||||||||
Sbjct 4556 ATACCGCCACGCAGACGCAGGACGAGATGCAGGGTGGACTCCTTCTGGATGTTGTAATCG 4615
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || || || || || || || || || | || |||||||| || |||||
Sbjct 4616 GAGAGCGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAAATCAGACGCTGCTGATCCGGG 4675
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| ||||| || ||||| |||||| || | | || | ||| || | || |||
Sbjct 4676 GGGATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTATCAGAAGACTCG 4735
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
|| || | ||| | || ||||| || || || || || ||||||||||||
Sbjct 4736 ACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTGACGAAAATCTGCATG 4786
>seq1920
Length=25525
Score = 82.4 bits (90), Expect = 6e-11
Identities = 135/195 (69%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251
|| || || |||||||||||| | ||| || |||||| || || || || ||| ||
Sbjct 16755 TCCTTCTGGATGTTGTAATCGGAGAGAGTCCGTCCATCTTCTAGCTGCTTGCCGGCGAAG 16814
Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311
|| | ||||| ||||| || || ||||| || ||||| ||||| || | |
Sbjct 16815 ATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTG 16874
Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371
|| | |||||| || ||||| || | ||| | || || || || || ||||| ||
Sbjct 16875 TCGATAGTGTCGCTGCTCTCGACCTCAAGGGTAATTGTCTTACCCGTGAGGGTTTTCACG 16934
Query 114372 AAAATCTGCATGGCT 114386
|| ||||||||||||
Sbjct 16935 AAGATCTGCATGGCT 16949
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420120641517444
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |