Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12-
22] 2,687 sequences; 28,556,450 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq2494 414 2e-110
seq2400 223 7e-53
>seq2494
Length=11727
Score = 414 bits (458), Expect = 2e-110
Identities = 1127/1710 (66%), Gaps = 59/1710 (3%)
Strand=Plus/Minus
Query 243741 TGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTC 243800
||||||||| ||| | |||| |||| || | |||||||||||| || ||||| || |
Sbjct 3419 TGAACTGGATGGGCTGGGCGGCTGCCTGCGTGCGCAGGTAGTACATTCCCGTCTTCAGGC 3360
Query 243801 CACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGT 243860
| |||| || || ||||||| || | ||| ||| || |||
Sbjct 3359 CCAGCTTCCAGCCGGTGAAGTGCATGCTTGTGATCTTGCCCATGGTGGGCT--------- 3309
Query 243861 CCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCC-CGCTCTGCG 243919
| |||| || |||||| ||||| |||||||| ||| | |||| || || ||
Sbjct 3308 -CACGCATGTGAAT--GTTGAGCGACTGCGACTGGTCGATGAACG-CGCCACGGTCGGCC 3253
Query 243920 GCCATGGTG----ATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTT 243975
||||| || || | || | ||||| || || ||| |||||||| | | |||
Sbjct 3252 GCCATC-TGCACAATCGTGCGCTGC-GAGATCTCCCAAACG--GTCTTGTACAGAGCCTT 3197
Query 243976 GAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGT 244035
|| || | |||| ||||||||| | ||| || | | | |||| || |
Sbjct 3196 GATGTCGGCCGGGATGTTGGGGATGTTCTGGATCGAACCGCCCTCGGCAATGATGCGGTT 3137
Query 244036 GCGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTGTTCAC 244095
|||||| || |||||| |||| | || ||| | ||| | ||| ||
Sbjct 3136 CTTCATGTTGTCCGACCACAGCCCCATATCAACGAGATCCTTCAGCAGCCACGGGTTGAC 3077
Query 244096 CACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGAT 244155
||||||||||| |||| |||||| |||||| ||||| |||| || ||||||||
Sbjct 3076 AACCTGAAACTCGCCCGCCAGCACACGGCGCGAGTAGATGTTGGACGTGTACGGCTCGAA 3017
Query 244156 GCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAG 244215
|| || |||||||||| ||||||| ||| ||| || |||||||| | ||||| |||
Sbjct 3016 GCATTCGTTGTTGCCCAGGATCTGCGACGTCGACGCTGTTGGCATGGGGGCCACCAACAG 2957
Query 244216 ACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCC 244275
|||||| | ||||||||| || ||| || | |||| || ||||||||||| | |
Sbjct 2956 ACTGTTGCGGACGCCGTGCTCCTTGATCTTCAGACGGAGCGAGTCCCAGTCCCACAGGTC 2897
Query 244276 CGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGG 244335
||| | | || ||| |||||||||| |||||| | |||| || ||
Sbjct 2896 --AGACGGCTTCACGT-------CCCACATGTCGGGCTGCAGAATTCCCTGAGACACAGG 2846
Query 244336 GCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGAG 244395
|||||| || |||| |||| || || ||||||||| | || | | |||
Sbjct 2845 AGAGCCCTCATACGTCGCATAGGTGCCCTCAATCTGGGCCAGGTCGCACGACGCAGTGAG 2786
Query 244396 GGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGT 244455
||||||| |||||||||||| ||||| |||||| | || || |||| | |
Sbjct 2785 AGCGGCGTGGTAGATGGTCTCAAAGATTTGCTTGTTGAGCTCCCGTGCCTCGGGCGACTC 2726
Query 244456 GAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGG 244515
||||| |||| || | || ||| | || ||||| |||||||| || | || || ||
Sbjct 2725 AAAGGGCATGCGCAGCGCCAGGAAAGCATCTGCCAGCCCCTGCACACCCAAACCAATAGG 2666
Query 244516 TCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCAC 244575
| ||| ||| ||||| | | ||| || ||||||||||| ||||| | || || |
Sbjct 2665 ACGGTGGCGCATGTTGCTGTTCTCGGCCTCCGGCACGGGGTAGTAGTTGACATCAATGAT 2606
Query 244576 CTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTC 244635
||| ||||||||| | || | | || ||| ||| || |||||||||
Sbjct 2605 GCGGTTCAGGTTGCGGACAAGCAGCTGTGCAACCTCGTGGAGCTTCTTGAAGTCGTAC-- 2548
Query 244636 GTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTT 244695
|| |||| | || | || || ||| || || || | | || |||||
Sbjct 2547 GT-------CTCGTTGTTGTAG-TCAACA-AAAGACGGC-AGTGCTAGGGAAGCTAGGTT 2498
Query 244696 GCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCA 244755
||| || || ||||| |||| |||||| |||||||| ||||| | ||| ||
Sbjct 2497 GCACACAGCAACCTCATCCGGTGCACTGTACTCCACAATCTCCGTGCACAAGTTGGAGCT 2438
Query 244756 CTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCAT 244815
||||||||| |||| || || ||| |||| ||| ||| |||||||||||||||
Sbjct 2437 GCGGATGGTGCCTAGGTTCTTCTGGTTGCTCTTGCGGTTACAGTGGTCCTTGTAGAGCAT 2378
Query 244816 GAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTT 244875
||| || || ||||| ||| || |||| || || |||||| | | |||||
Sbjct 2377 GAACGGATTGCCCGTCTCCGTCTGAGCCTCGAGAACTGCGTACCAGAGCTTCTGGGCCTT 2318
Query 244876 GACCGTCCTGCGAGCCTTGCCCTCTGC-CTCGTAGCGGGTGTACAGGGCCTCGAACTCGG 244934
|||| | |||| ||| | ||| || |||||| ||||||||||| ||||||
Sbjct 2317 GACCTTTTTGCG-GCCACGACCTTCGCGCTCGTACTTCTCATACAGGGCCTCAAACTCGT 2259
Query 244935 GGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGC 244994
||| |||| || | || ||||| ||| |||||||| || |||||||||||
Sbjct 2258 CGCCGTAGACGTCCGCCAGACCGGGACACTCGTTGGGGCACATCAGCGTCCACTCGCCGT 2199
Query 244995 CGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGG 245054
| || |||| || |||||| || || ||||||||||| ||| |||| || || | |
Sbjct 2198 TCTTCTCAACCCGCTTCATGAACAGATCAGGGATCCAGAGCGCCAGGAACAGATCGCGAG 2139
Query 245055 TCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGT 245114
| ||| ||| |||| ||| || | ||| || | || |||||||| || | |
Sbjct 2138 CACGAATCTCCTCCTTGCCATGGTTTTTGCGCAGGTCAAGGAACTCAAAGACATCAGCAT 2079
Query 245115 GCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCA 245174
|||| ||||| | ||||| || ||||| || |||||||| || ||||||||||
Sbjct 2078 GCCAAGGCTCTAGGTAGATGCAGAAAGCGCCCGGGCGCTTGTTTCCGCCCTGGTCCA--- 2022
Query 245175 TCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCG 245230
| | ||||| |||| ||| || || |||| | ||||| || || ||||
Sbjct 2021 -CATAGCGAGCCGTGTTGTTGTAGACACGGAGCATAGGGATGATGCCATTGGACGTGCCG 1963
Query 245231 TTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGA---GGTTGCTGATGGACATGCCTAGT 245287
|| ||||| ||||||| ||| | ||| || ||| | | || | ||| |
Sbjct 1962 TTTGTGCCGGCAATGTAGGAGCCGGTAGCCCGGATACGGTGGACGTTG---AGGCCAATG 1906
Query 245288 CCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATG 245347
|| || || ||||||||| | ||| ||| |||||| |||||| || ||||| |||
Sbjct 1905 CCACCAGCCGTCTTGGAGATCATGGCACAGGTCTTGAGGGTGTCATAGATACCCTCAATG 1846
Query 245348 CTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAG 245407
||||| ||| |||| | || |||||||| |||| |||| || || ||| | |
Sbjct 1845 CTGTCATCCTTTATGTCCACAAGGAAGCAGGATGACATTTGGGCCTGTGGTGTGCCGGCG 1786
Query 245408 TTGAACAGAGTGGGGCTGGCGTGGGTAAAG 245437
||||| || || || ||| || || |||
Sbjct 1785 TTGAAGAGTGTCGGCGAGGCATGCGTGAAG 1756
>seq2400
Length=47555
Score = 223 bits (246), Expect = 7e-53
Identities = 363/516 (70%), Gaps = 9/516 (2%)
Strand=Plus/Plus
Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCC-CGACGCAAC 42691
|| |||||| |||||||| || ||||| ||||| |||||| || || ||| | ||
Sbjct 7429 CCTTGCATCCGCAAGAAGGCCGATTGGGCTCTCAAGTGGATCTC-AGACCGCGAGTCCAC 7487
Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751
|| | || | ||||| || ||| |||| || ||||||||||||||| || |||||
Sbjct 7488 CTTTGCTCAGCGCCTGGTCGCTTTTGCCGCTGTGGAGGGCATCTTCTTCAGCGGTGCCTT 7547
Query 42752 CGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGA 42811
| | |||||||||||||| ||| || | |||||| || || |||||||| |||||
Sbjct 7548 CTCTTCCATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCTGGCCTGACCTTCTCCAACGA 7607
Query 42812 ACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCA 42871
|| || | |||||||| ||||| | ||||| || ||||| |||||||| ||
Sbjct 7608 GCTTATTTCTCGTGACGAGGGCCTGCACACCGACTTCGCTTGCCTGCTGTTCTC---TCA 7664
Query 42872 CCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGAT 42931
|| | | || ||| |||||| | ||| || || ||| || || || ||||
Sbjct 7665 TCTGAAGAACCGCCCCAGCAAGGAGATGATCCAGGAGATAATCGTCGATGCTGTCAAGAT 7724
Query 42932 CGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCT 42991
||| ||||||||||||| || | || ||| | ||| ||||||||||| | ||
Sbjct 7725 TGAGCAGGAGTTCCTCACCGAGGCCCTTCCCTGCGCTCTGCTCGGCATGAACTCCACACT 7784
Query 42992 CATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTG--TGCCAGATGGGTCTCAGC 43049
|||| ||||||| ||| ||| ||||||| || ||| |||| || | |
Sbjct 7785 CATGAAGCAGTACATTGAGTTCGTTGCCGACCGCCTTCTGGTTGCC-CTCGGCAATGATA 7843
Query 43050 CGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAG 43109
| | ||| | | |||||||||||| |||||||||||||| ||| ||||||
Sbjct 7844 AG-GTGTACCGTTCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGGTGGCAAG 7902
Query 43110 ACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145
|||||||| ||||||||||| |||| |||||||||
Sbjct 7903 ACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAG 7938
Score = 116 bits (128), Expect = 7e-21
Identities = 230/336 (68%), Gaps = 11/336 (3%)
Strand=Plus/Plus
Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359
|||||| |||||||||||| || || |||||| || |||||||| |||||
Sbjct 7034 ATCTGGCAAATGTACAAGAAGCACGAGGCTTCGTTCTGGACTGCTGAGGAGATCGACCTC 7093
Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGA-ACGAAAAG---TTTTTCCTCAA 42415
||||||| | || |||| | || | |||| | || || || ||| ||
Sbjct 7094 TCCAAGGATCTGCACGACTGGAACA-ACCGCCTGAACGATGATGAGCGCTTCTTCGTCTC 7152
Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475
|||| ||||| ||||| |||||||| |||||||| ||||| |||||||| | |
Sbjct 7153 GCACATCCTGGCGTTCTTTGCCGCCTCCGACGGCATCGTCAACGAGAACCTAGTTGAGCG 7212
Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535
|||| ||||| ||| ||||| |||||||| |||||||||||||| ||
Sbjct 7213 CTTCAGTGCTGAGGTCCAGGTGCCGGAGGCTCGCTGCTTTTACGGCTTCCAGATCATGAT 7272
Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCC 42592
|||||||| ||||| ||| ||| || ||||||| |||| |||||| ||| |
Sbjct 7273 GGAGAACGTCCACTCCGAGACATACTCC---CTGCTCATCGACACCTACATCAAGGAAAC 7329
Query 42593 CGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGAC 42628
|| |||| | | |||||||| ||||| || ||
Sbjct 7330 CGAGCAGCGCACCCACCTGTTCAATGCCATTGATAC 7365
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944307482007120
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