Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12- 22] 2,687 sequences; 28,556,450 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq2494 414 2e-110 seq2400 223 7e-53 >seq2494 Length=11727 Score = 414 bits (458), Expect = 2e-110 Identities = 1127/1710 (66%), Gaps = 59/1710 (3%) Strand=Plus/Minus Query 243741 TGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTC 243800 ||||||||| ||| | |||| |||| || | |||||||||||| || ||||| || | Sbjct 3419 TGAACTGGATGGGCTGGGCGGCTGCCTGCGTGCGCAGGTAGTACATTCCCGTCTTCAGGC 3360 Query 243801 CACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGT 243860 | |||| || || ||||||| || | ||| ||| || ||| Sbjct 3359 CCAGCTTCCAGCCGGTGAAGTGCATGCTTGTGATCTTGCCCATGGTGGGCT--------- 3309 Query 243861 CCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCC-CGCTCTGCG 243919 | |||| || |||||| ||||| |||||||| ||| | |||| || || || Sbjct 3308 -CACGCATGTGAAT--GTTGAGCGACTGCGACTGGTCGATGAACG-CGCCACGGTCGGCC 3253 Query 243920 GCCATGGTG----ATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTT 243975 ||||| || || | || | ||||| || || ||| |||||||| | | ||| Sbjct 3252 GCCATC-TGCACAATCGTGCGCTGC-GAGATCTCCCAAACG--GTCTTGTACAGAGCCTT 3197 Query 243976 GAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGT 244035 || || | |||| ||||||||| | ||| || | | | |||| || | Sbjct 3196 GATGTCGGCCGGGATGTTGGGGATGTTCTGGATCGAACCGCCCTCGGCAATGATGCGGTT 3137 Query 244036 GCGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTGTTCAC 244095 |||||| || |||||| |||| | || ||| | ||| | ||| || Sbjct 3136 CTTCATGTTGTCCGACCACAGCCCCATATCAACGAGATCCTTCAGCAGCCACGGGTTGAC 3077 Query 244096 CACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGAT 244155 ||||||||||| |||| |||||| |||||| ||||| |||| || |||||||| Sbjct 3076 AACCTGAAACTCGCCCGCCAGCACACGGCGCGAGTAGATGTTGGACGTGTACGGCTCGAA 3017 Query 244156 GCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAG 244215 || || |||||||||| ||||||| ||| ||| || |||||||| | ||||| ||| Sbjct 3016 GCATTCGTTGTTGCCCAGGATCTGCGACGTCGACGCTGTTGGCATGGGGGCCACCAACAG 2957 Query 244216 ACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCC 244275 |||||| | ||||||||| || ||| || | |||| || ||||||||||| | | Sbjct 2956 ACTGTTGCGGACGCCGTGCTCCTTGATCTTCAGACGGAGCGAGTCCCAGTCCCACAGGTC 2897 Query 244276 CGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGG 244335 ||| | | || ||| |||||||||| |||||| | |||| || || Sbjct 2896 --AGACGGCTTCACGT-------CCCACATGTCGGGCTGCAGAATTCCCTGAGACACAGG 2846 Query 244336 GCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGAG 244395 |||||| || |||| |||| || || ||||||||| | || | | ||| Sbjct 2845 AGAGCCCTCATACGTCGCATAGGTGCCCTCAATCTGGGCCAGGTCGCACGACGCAGTGAG 2786 Query 244396 GGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGT 244455 ||||||| |||||||||||| ||||| |||||| | || || |||| | | Sbjct 2785 AGCGGCGTGGTAGATGGTCTCAAAGATTTGCTTGTTGAGCTCCCGTGCCTCGGGCGACTC 2726 Query 244456 GAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGG 244515 ||||| |||| || | || ||| | || ||||| |||||||| || | || || || Sbjct 2725 AAAGGGCATGCGCAGCGCCAGGAAAGCATCTGCCAGCCCCTGCACACCCAAACCAATAGG 2666 Query 244516 TCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCAC 244575 | ||| ||| ||||| | | ||| || ||||||||||| ||||| | || || | Sbjct 2665 ACGGTGGCGCATGTTGCTGTTCTCGGCCTCCGGCACGGGGTAGTAGTTGACATCAATGAT 2606 Query 244576 CTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTC 244635 ||| ||||||||| | || | | || ||| ||| || ||||||||| Sbjct 2605 GCGGTTCAGGTTGCGGACAAGCAGCTGTGCAACCTCGTGGAGCTTCTTGAAGTCGTAC-- 2548 Query 244636 GTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTT 244695 || |||| | || | || || ||| || || || | | || ||||| Sbjct 2547 GT-------CTCGTTGTTGTAG-TCAACA-AAAGACGGC-AGTGCTAGGGAAGCTAGGTT 2498 Query 244696 GCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCA 244755 ||| || || ||||| |||| |||||| |||||||| ||||| | ||| || Sbjct 2497 GCACACAGCAACCTCATCCGGTGCACTGTACTCCACAATCTCCGTGCACAAGTTGGAGCT 2438 Query 244756 CTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCAT 244815 ||||||||| |||| || || ||| |||| ||| ||| ||||||||||||||| Sbjct 2437 GCGGATGGTGCCTAGGTTCTTCTGGTTGCTCTTGCGGTTACAGTGGTCCTTGTAGAGCAT 2378 Query 244816 GAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTT 244875 ||| || || ||||| ||| || |||| || || |||||| | | ||||| Sbjct 2377 GAACGGATTGCCCGTCTCCGTCTGAGCCTCGAGAACTGCGTACCAGAGCTTCTGGGCCTT 2318 Query 244876 GACCGTCCTGCGAGCCTTGCCCTCTGC-CTCGTAGCGGGTGTACAGGGCCTCGAACTCGG 244934 |||| | |||| ||| | ||| || |||||| ||||||||||| |||||| Sbjct 2317 GACCTTTTTGCG-GCCACGACCTTCGCGCTCGTACTTCTCATACAGGGCCTCAAACTCGT 2259 Query 244935 GGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGC 244994 ||| |||| || | || ||||| ||| |||||||| || ||||||||||| Sbjct 2258 CGCCGTAGACGTCCGCCAGACCGGGACACTCGTTGGGGCACATCAGCGTCCACTCGCCGT 2199 Query 244995 CGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGG 245054 | || |||| || |||||| || || ||||||||||| ||| |||| || || | | Sbjct 2198 TCTTCTCAACCCGCTTCATGAACAGATCAGGGATCCAGAGCGCCAGGAACAGATCGCGAG 2139 Query 245055 TCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGT 245114 | ||| ||| |||| ||| || | ||| || | || |||||||| || | | Sbjct 2138 CACGAATCTCCTCCTTGCCATGGTTTTTGCGCAGGTCAAGGAACTCAAAGACATCAGCAT 2079 Query 245115 GCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCA 245174 |||| ||||| | ||||| || ||||| || |||||||| || |||||||||| Sbjct 2078 GCCAAGGCTCTAGGTAGATGCAGAAAGCGCCCGGGCGCTTGTTTCCGCCCTGGTCCA--- 2022 Query 245175 TCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCG 245230 | | ||||| |||| ||| || || |||| | ||||| || || |||| Sbjct 2021 -CATAGCGAGCCGTGTTGTTGTAGACACGGAGCATAGGGATGATGCCATTGGACGTGCCG 1963 Query 245231 TTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGA---GGTTGCTGATGGACATGCCTAGT 245287 || ||||| ||||||| ||| | ||| || ||| | | || | ||| | Sbjct 1962 TTTGTGCCGGCAATGTAGGAGCCGGTAGCCCGGATACGGTGGACGTTG---AGGCCAATG 1906 Query 245288 CCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATG 245347 || || || ||||||||| | ||| ||| |||||| |||||| || ||||| ||| Sbjct 1905 CCACCAGCCGTCTTGGAGATCATGGCACAGGTCTTGAGGGTGTCATAGATACCCTCAATG 1846 Query 245348 CTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAG 245407 ||||| ||| |||| | || |||||||| |||| |||| || || ||| | | Sbjct 1845 CTGTCATCCTTTATGTCCACAAGGAAGCAGGATGACATTTGGGCCTGTGGTGTGCCGGCG 1786 Query 245408 TTGAACAGAGTGGGGCTGGCGTGGGTAAAG 245437 ||||| || || || ||| || || ||| Sbjct 1785 TTGAAGAGTGTCGGCGAGGCATGCGTGAAG 1756 >seq2400 Length=47555 Score = 223 bits (246), Expect = 7e-53 Identities = 363/516 (70%), Gaps = 9/516 (2%) Strand=Plus/Plus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCC-CGACGCAAC 42691 || |||||| |||||||| || ||||| ||||| |||||| || || ||| | || Sbjct 7429 CCTTGCATCCGCAAGAAGGCCGATTGGGCTCTCAAGTGGATCTC-AGACCGCGAGTCCAC 7487 Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751 || | || | ||||| || ||| |||| || ||||||||||||||| || ||||| Sbjct 7488 CTTTGCTCAGCGCCTGGTCGCTTTTGCCGCTGTGGAGGGCATCTTCTTCAGCGGTGCCTT 7547 Query 42752 CGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGA 42811 | | |||||||||||||| ||| || | |||||| || || |||||||| ||||| Sbjct 7548 CTCTTCCATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCTGGCCTGACCTTCTCCAACGA 7607 Query 42812 ACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCA 42871 || || | |||||||| ||||| | ||||| || ||||| |||||||| || Sbjct 7608 GCTTATTTCTCGTGACGAGGGCCTGCACACCGACTTCGCTTGCCTGCTGTTCTC---TCA 7664 Query 42872 CCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGAT 42931 || | | || ||| |||||| | ||| || || ||| || || || |||| Sbjct 7665 TCTGAAGAACCGCCCCAGCAAGGAGATGATCCAGGAGATAATCGTCGATGCTGTCAAGAT 7724 Query 42932 CGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCT 42991 ||| ||||||||||||| || | || ||| | ||| ||||||||||| | || Sbjct 7725 TGAGCAGGAGTTCCTCACCGAGGCCCTTCCCTGCGCTCTGCTCGGCATGAACTCCACACT 7784 Query 42992 CATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTG--TGCCAGATGGGTCTCAGC 43049 |||| ||||||| ||| ||| ||||||| || ||| |||| || | | Sbjct 7785 CATGAAGCAGTACATTGAGTTCGTTGCCGACCGCCTTCTGGTTGCC-CTCGGCAATGATA 7843 Query 43050 CGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAG 43109 | | ||| | | |||||||||||| |||||||||||||| ||| |||||| Sbjct 7844 AG-GTGTACCGTTCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGGTGGCAAG 7902 Query 43110 ACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 |||||||| ||||||||||| |||| ||||||||| Sbjct 7903 ACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAG 7938 Score = 116 bits (128), Expect = 7e-21 Identities = 230/336 (68%), Gaps = 11/336 (3%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||| || || |||||| || |||||||| ||||| Sbjct 7034 ATCTGGCAAATGTACAAGAAGCACGAGGCTTCGTTCTGGACTGCTGAGGAGATCGACCTC 7093 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGA-ACGAAAAG---TTTTTCCTCAA 42415 ||||||| | || |||| | || | |||| | || || || ||| || Sbjct 7094 TCCAAGGATCTGCACGACTGGAACA-ACCGCCTGAACGATGATGAGCGCTTCTTCGTCTC 7152 Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475 |||| ||||| ||||| |||||||| |||||||| ||||| |||||||| | | Sbjct 7153 GCACATCCTGGCGTTCTTTGCCGCCTCCGACGGCATCGTCAACGAGAACCTAGTTGAGCG 7212 Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535 |||| ||||| ||| ||||| |||||||| |||||||||||||| || Sbjct 7213 CTTCAGTGCTGAGGTCCAGGTGCCGGAGGCTCGCTGCTTTTACGGCTTCCAGATCATGAT 7272 Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCC 42592 |||||||| ||||| ||| ||| || ||||||| |||| |||||| ||| | Sbjct 7273 GGAGAACGTCCACTCCGAGACATACTCC---CTGCTCATCGACACCTACATCAAGGAAAC 7329 Query 42593 CGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGAC 42628 || |||| | | |||||||| ||||| || || Sbjct 7330 CGAGCAGCGCACCCACCTGTTCAATGCCATTGATAC 7365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944307482007120