Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12- 22] 2,687 sequences; 28,556,450 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq2379 129 1e-24 seq2400 91.5 3e-13 >seq2379 Length=13478 Score = 129 bits (142), Expect = 1e-24 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || |||||||| | ||| || || ||||| || || |||| ||||||||| ||||| Sbjct 4574 AGGACGAGATGCAGGGTGGACTCCTTCTGGATGTTGTAATCGGAGAGCGTGCGGCCGTCC 4633 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || | || ||||| || || ||||||||||| ||| ||||| || || || ||| Sbjct 4634 TCGAGCTGCTTTCCGGCAAAAATCAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCC 4693 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441 || || || | || ||||| || || | ||| || || || ||||| ||||| ||| Sbjct 4694 TGAATCTTGGACTTGACGTTGTCGATGGTATCAGAAGACTCGACCTCGAGGGTGATGGTC 4753 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 || || || || ||||||||||| |||||||| ||| Sbjct 4754 TTGCCTGTGAGGGTCTTGACGAAAATCTGCATGATG 4789 Score = 123 bits (136), Expect = 6e-23 Identities = 166/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || || |||| || ||| || ||||| || ||||| | Sbjct 4103 CCACCACGGAGCCGCAGCACCAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAGTCCGAT 4162 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG- 288365 |||||||| || || || || || || || |||||||| || ||||| || ||||| Sbjct 4163 AGCGTGCGGCCATCCTCCAACTGCTTGCCAGCGAAGATAAGGCGCTGCTGG---TCTGGC 4219 Query 288366 --GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||| || || || ||||||||||| | ||||| || || || | || ||| || Sbjct 4220 GGGATGCCCTCCTTGTCCTGGATTTTAGACTTCACATTGTCAATCGTGTCCGACGACTCC 4279 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||||||||| || || || ||||| ||||| |||||||| Sbjct 4280 ACCTCCAGGGTGATCGTCTTGCCCGTAAGCGTCTTTACGAAAATCTGCAT 4329 Score = 120 bits (132), Expect = 7e-22 Identities = 167/233 (72%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || || || || || | ||| || || || | ||| ||| || |||||||| ||||| Sbjct 3872 TGGCCGCCACGCAGACGAAGCACCAGGTGCAGCGTCGATTCCTTCTGGATATTGTAGTCC 3931 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 | ||| ||||| ||||| || | || || || || || || || ||||| || ||| Sbjct 3932 GAGAGGGTGCGGCCGTCCTCCAGCTGCTTGCCCGCAAAAATGAGCCGCTGCTGG---TCT 3988 Query 288364 GGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGAT 288420 ||| || || || || ||||| || |||| |||||||| || || | ||| || Sbjct 3989 GGGGGAATGCCCTCCTTGTCCTGAATCTTCGACTTCACGTTGTCAATCGTATCTGATGAC 4048 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | || ||||||||||| ||||| ||||||||||| |||||||| Sbjct 4049 TCAACCTCCAAGGTAATCGTCTTCCCTGTCAGCGTCTTGACGAAAATCTGCAT 4101 Score = 113 bits (124), Expect = 1e-19 Identities = 165/232 (71%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||||||||| | || || || || | ||| || || || || || |||| Sbjct 4327 CATG-CCACCGCGGAGCCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGAATGTTGTAGT 4385 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | | || || ||||| || || | || || || ||||| ||||| ||||| || Sbjct 4386 CCGAAAGGGTCCGTCCATCCTCAAGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCGG 4445 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 |||||| || || || |||||||| || | || ||||| || || | || ||| | Sbjct 4446 GTGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTATCGATGGTGTCCGACGACT 4505 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || || ||||| ||||| || ||||| ||||||||||| |||||||| Sbjct 4506 CGACCTCCAGAGTGATGGTCTTGCCAGTCAGCGTCTTGACGAAGATCTGCAT 4557 >seq2400 Length=47555 Score = 91.5 bits (100), Expect = 3e-13 Identities = 141/197 (72%), Gaps = 6/197 (3%) Strand=Plus/Plus Query 269147 CTATGATCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTA 269206 || || |||| ||||| || |||||||| || || || || ||||| || || || Sbjct 7760 CTCTGCTCGGCATGAACTCCACACTCATGAAGCAGTACATTGAGTTCGTTGCCGACCGC- 7818 Query 269207 TCTTCACG--GCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTAT 269264 |||| | || ||||| |||| || |||||| ||| | || ||||||| ||| || Sbjct 7819 -CTTCTGGTTGCCCTCGGCAATGATAAGGTGTACCGTTCCACCAACCCCTTCGACTTCAT 7877 Query 269265 GGAACTAATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCA 269324 ||| || || || | || ||||| ||||||||||| ||||||||| | ||||| || Sbjct 7878 GGAGAACATCTCCCTGGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCA 7937 Query 269325 -ACGTCCTGGTGTAATG 269340 | | || ||||| ||| Sbjct 7938 GAAGGCC-GGTGTGATG 7953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179613787816786