Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12-
22] 2,687 sequences; 28,556,450 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq2494 192 7e-44
seq2400 102 1e-16
>seq2494
Length=11727
Score = 192 bits (212), Expect = 7e-44
Identities = 1065/1675 (64%), Gaps = 57/1675 (3%)
Strand=Plus/Minus
Query 113565 TGAACTGAATGGGTCT---CGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGA 113621
||||||| ||||| || || || |||| | || ||||||||||| |||||||| |
Sbjct 3419 TGAACTGGATGGG-CTGGGCGGCT--GCCTGCGTGCGCAGGTAGTACATTCCCGTCTTCA 3363
Query 113622 GCCCCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTC-C 113680
| ||| |||||||| | | ||||| | | |||| | || ||| || | |
Sbjct 3362 GGCCCAGCTTCCAGCCGGTGAAGTGCATGCTTGTGATCTTGCCCA-TGGTGGGCTCACGC 3304
Query 113681 ATGAAGAGGTTCATACTTTGGGATTGATCGATGAA-GCGTCCACGATCCGCCGCCATATC 113739
||| | ||| | || || || |||||||| ||| ||||| || |||||||| |
Sbjct 3303 ATGTGAATGTTGAGCGACTGCGACTGGTCGATGAACGCG-CCACGGTCGGCCGCCATCTG 3245
Query 113740 AATCACATCCTTCAT--CTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCT 113797
| || ||| | | | ||| ||||| || || |||| || ||| || || |
Sbjct 3244 CA-CA-ATCGTGCGCTGCGAGATCTCCCAAACGGTCTTGTACAGAGCCTTGATGTCGGCC 3187
Query 113798 GGGATATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCC 113857
||||| | ||| || ||||| || || ||| | | ||| | | |||||| |
Sbjct 3186 GGGATGTTGGGGATGTTCTGGATCGAACCGCCCTCGGCAATGATGCGGTTCTTCATGTTG 3127
Query 113858 TTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAAC 113917
| ||||| || || || | |||||||| || || | |||||||| ||||
Sbjct 3126 TCCGACCACAGCCCCATATCAACGAGATCCTTCAGCAGCCACGGGTTGACAACCTGAAAC 3067
Query 113918 TCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTG 113977
|| ||||| || || | | ||||| |||| |||||| ||||| ||||| || |||
Sbjct 3066 TCGCCCGCCAGCACACGGCGCGAGTAGATGTTGGACGTGTACGGCTCGAAGCATTCGTTG 3007
Query 113978 TTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGG 114037
|| |||| ||| || | || || ||||| |||||||| |||| | || ||||| |||
Sbjct 3006 TTGCCCAGGATCTGCGACGTCGACGCTGTTGGCATGGGGGCCACCAACAGACTGTTGCGG 2947
Query 114038 AGACCCTTTTCCCTAATGCGTTCCTT--GAGGGCGTCCCAGTCGTA--GTTGAGCTTTGT 114093
| || | ||| | || ||| ||| | ||||||||| | | | || |
Sbjct 2946 ACGCCGTGCTCCTTGATC--TTCAGACGGAGCGAGTCCCAGTCCCACAGGTCAGAC--GG 2891
Query 114094 CTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGT 114153
|| | | | |||||| || ||| || || || || || | || || |||||| | ||
Sbjct 2890 CTTCACGTCCCACATGTCGGGCTGCAGAATTCCCTGAGACACAGGAGAGCCCTCATACGT 2831
Query 114154 CTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACAT 114213
| | || | |||||||| || |||| ||| | ||| ||| || ||||| || ||
Sbjct 2830 CGCATAGGTGCCCTCAATCTGGGCCAGGTCGCACGACGCAGTGAGAGCGGCGTGGTAGAT 2771
Query 114214 TGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCA 114273
|||||||| || | || | || |||||| || ||||| | | ||
Sbjct 2770 GGTCTCAAAGATTTGCTTGTTGAGCTCCCGTGCCTCGGGCGACTCAAAGGGCATGCGCAG 2711
Query 114274 CAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATT 114333
| | || |||| || || || || ||||| | ||||| || || || | ||| ||
Sbjct 2710 CGCCAGGAAAGCATCTGCCAGCCCCTGCACACCCAAACCAATAGGACGGTGGCGCATGTT 2651
Query 114334 AGACTTTCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATT 114390
| ||| ||| |||| ||||| || | || ||| || | | || || ||
Sbjct 2650 -GCTGTTCT--CGGCCTCCGGCACGGGGTAGTAGTTGACATCAATGATGCGGTTCAGGTT 2594
Query 114391 TTTGGTGACAACCTT-TGTG--ATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTC 114447
| ||||| | |||| | || || ||||| | | | || | |||||
Sbjct 2593 ---GCGGACAAGCAGCTGTGCAACCTCGTGGAGCTTCTTGAAGTCGTAC------GTCTC 2543
Query 114448 TTCATTG------ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTC 114501
| ||| ||| | || || || | || || || || ||||||| |||
Sbjct 2542 GTTGTTGTAGTCAACAAAAGACGGCAGTGCTAGGGAAGCTAGGTTGCACACAGCAACCTC 2483
Query 114502 ATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAA 114561
|||| || ||||||| | ||| ||||| ||||| || || || |||||||| |
Sbjct 2482 ATCCGGTGCACTGTACTCCACAATCTCCGTGCACAAGTTGGAGCTGCGGATGGTGCCTAG 2423
Query 114562 GTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGT 114621
|||||| || || ||| |||||| |||||||| |||||| | || | |||||
Sbjct 2422 GTTCTTCTGGTTGCTCTTGCGGTTACAGTGGTCCTTGTAGAGCATGAACGGATTGCCCGT 2363
Query 114622 CTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGG 114680
|||||| || | || ||||| || | ||||| | || | | || | || | | |
Sbjct 2362 CTCCGTCTGAGCCTCGAGAACTGCGTACCAGAGCTTCTGGGCCTTG-ACCTTTTTGCGGC 2304
Query 114681 CTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTG 114740
| || || || ||||||||| || ||||| |||||||| || || | | || |
Sbjct 2303 CACGACCTTCGCGCTCGTACTTCTCATACAGGGCCTCAAACTCGTCGCCGTAGACGTCCG 2244
Query 114741 AGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCT 114800
|| || || || | ||||| | || | ||| | || || |||||| ||||
Sbjct 2243 CCAGACCGGGACACTCGTTGGGGCACATCAGCGTCCACTCGCCGTTCTTCTCAACCCGCT 2184
Query 114801 TCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCAT 114860
||||||| || || ||||||||||| || ||| ||||| ||| ||| || || |
Sbjct 2183 TCATGAACAGATCAGGGATCCAGAGCGCCAGGAACAGATCGCGAGCACGAATCTCCTCCT 2124
Query 114861 CCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGT 114920
|| || || |||| || | || || | || ||| || ||||| || || ||||
Sbjct 2123 TGCCATGGTTTTTGCGCAGGTCAAGGAACTCAAAGACATCAGCATGCCAAGGCTCTAGGT 2064
Query 114921 ACACCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCTGTGGCAT 114977
| | || | ||| || || |||||| ||||| | || ||| |
Sbjct 2063 AGATGCAGAAAGCGCCCGGGCGCTTGTTTCCGCCCTGGTCCACATAGCGAGCCGTGTTGT 2004
Query 114978 TAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TACG 115035
| | || || ||||| || ||||| |||| || ||| ||||| || || || |
Sbjct 2003 TGTAGACACGGAGCATAGGGATGATGCCATTGGACGTGCCGTTTGTGCCGGCAATGTAGG 1944
Query 115036 AGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGAT 115095
|| | | || | || | |||| || | ||||| || || ||| ||| |||||
Sbjct 1943 AGCC--GGTAGCCCGGATACGGTGGACGTTGAGGCCAATGCCACCAGCCGTCTTGGAGAT 1886
Query 115096 TTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGAT 115155
|| || | |||| || | ||||| || || || |||| |||| | | |
Sbjct 1885 CATGGCACAGGTCTTGAGGGTGTCATAGATACCCTCAATGCTGTCATCCTTTATGTCCAC 1826
Query 115156 AAGGAAGCAGCTCGACATTTGTGGCCT-TGGTGTACCAGCGTTGAAGAGGGTTGG 115209
|||||||||| |||||||| ||||| |||||| || ||||||||||| || ||
Sbjct 1825 AAGGAAGCAGGATGACATTTG-GGCCTGTGGTGTGCCGGCGTTGAAGAGTGTCGG 1772
>seq2400
Length=47555
Score = 102 bits (112), Expect = 1e-16
Identities = 112/149 (75%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117
||| || ||||||||||| || || || || || |||||| ||| || ||||| || ||
Sbjct 7635 GTGCAGGCCCTCGTCACGAGAAATAAGCTCGTTGGAGAAGGTCAGGCCAGGCATCAGGCC 7576
Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177
|||||||||| |||||| || | | | || | ||| ||||||||| |||||||||
Sbjct 7575 GCGCTTCTTCAGCCAGAAGATGGAAGAGAAGGCACCGCTGAAGAAGATGCCCTCCACAGC 7516
Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAGG 126206
|| || || | || |||| ||||||||
Sbjct 7515 GGCAAAAGCGACCAGGCGCTGAGCAAAGG 7487
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597333536385960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |