Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12- 22] 2,687 sequences; 28,556,450 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq2494 192 7e-44 seq2400 102 1e-16 >seq2494 Length=11727 Score = 192 bits (212), Expect = 7e-44 Identities = 1065/1675 (64%), Gaps = 57/1675 (3%) Strand=Plus/Minus Query 113565 TGAACTGAATGGGTCT---CGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGA 113621 ||||||| ||||| || || || |||| | || ||||||||||| |||||||| | Sbjct 3419 TGAACTGGATGGG-CTGGGCGGCT--GCCTGCGTGCGCAGGTAGTACATTCCCGTCTTCA 3363 Query 113622 GCCCCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTC-C 113680 | ||| |||||||| | | ||||| | | |||| | || ||| || | | Sbjct 3362 GGCCCAGCTTCCAGCCGGTGAAGTGCATGCTTGTGATCTTGCCCA-TGGTGGGCTCACGC 3304 Query 113681 ATGAAGAGGTTCATACTTTGGGATTGATCGATGAA-GCGTCCACGATCCGCCGCCATATC 113739 ||| | ||| | || || || |||||||| ||| ||||| || |||||||| | Sbjct 3303 ATGTGAATGTTGAGCGACTGCGACTGGTCGATGAACGCG-CCACGGTCGGCCGCCATCTG 3245 Query 113740 AATCACATCCTTCAT--CTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCT 113797 | || ||| | | | ||| ||||| || || |||| || ||| || || | Sbjct 3244 CA-CA-ATCGTGCGCTGCGAGATCTCCCAAACGGTCTTGTACAGAGCCTTGATGTCGGCC 3187 Query 113798 GGGATATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCC 113857 ||||| | ||| || ||||| || || ||| | | ||| | | |||||| | Sbjct 3186 GGGATGTTGGGGATGTTCTGGATCGAACCGCCCTCGGCAATGATGCGGTTCTTCATGTTG 3127 Query 113858 TTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAAC 113917 | ||||| || || || | |||||||| || || | |||||||| |||| Sbjct 3126 TCCGACCACAGCCCCATATCAACGAGATCCTTCAGCAGCCACGGGTTGACAACCTGAAAC 3067 Query 113918 TCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTG 113977 || ||||| || || | | ||||| |||| |||||| ||||| ||||| || ||| Sbjct 3066 TCGCCCGCCAGCACACGGCGCGAGTAGATGTTGGACGTGTACGGCTCGAAGCATTCGTTG 3007 Query 113978 TTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGG 114037 || |||| ||| || | || || ||||| |||||||| |||| | || ||||| ||| Sbjct 3006 TTGCCCAGGATCTGCGACGTCGACGCTGTTGGCATGGGGGCCACCAACAGACTGTTGCGG 2947 Query 114038 AGACCCTTTTCCCTAATGCGTTCCTT--GAGGGCGTCCCAGTCGTA--GTTGAGCTTTGT 114093 | || | ||| | || ||| ||| | ||||||||| | | | || | Sbjct 2946 ACGCCGTGCTCCTTGATC--TTCAGACGGAGCGAGTCCCAGTCCCACAGGTCAGAC--GG 2891 Query 114094 CTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGT 114153 || | | | |||||| || ||| || || || || || | || || |||||| | || Sbjct 2890 CTTCACGTCCCACATGTCGGGCTGCAGAATTCCCTGAGACACAGGAGAGCCCTCATACGT 2831 Query 114154 CTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACAT 114213 | | || | |||||||| || |||| ||| | ||| ||| || ||||| || || Sbjct 2830 CGCATAGGTGCCCTCAATCTGGGCCAGGTCGCACGACGCAGTGAGAGCGGCGTGGTAGAT 2771 Query 114214 TGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCA 114273 |||||||| || | || | || |||||| || ||||| | | || Sbjct 2770 GGTCTCAAAGATTTGCTTGTTGAGCTCCCGTGCCTCGGGCGACTCAAAGGGCATGCGCAG 2711 Query 114274 CAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATT 114333 | | || |||| || || || || ||||| | ||||| || || || | ||| || Sbjct 2710 CGCCAGGAAAGCATCTGCCAGCCCCTGCACACCCAAACCAATAGGACGGTGGCGCATGTT 2651 Query 114334 AGACTTTCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATT 114390 | ||| ||| |||| ||||| || | || ||| || | | || || || Sbjct 2650 -GCTGTTCT--CGGCCTCCGGCACGGGGTAGTAGTTGACATCAATGATGCGGTTCAGGTT 2594 Query 114391 TTTGGTGACAACCTT-TGTG--ATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTC 114447 | ||||| | |||| | || || ||||| | | | || | ||||| Sbjct 2593 ---GCGGACAAGCAGCTGTGCAACCTCGTGGAGCTTCTTGAAGTCGTAC------GTCTC 2543 Query 114448 TTCATTG------ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTC 114501 | ||| ||| | || || || | || || || || ||||||| ||| Sbjct 2542 GTTGTTGTAGTCAACAAAAGACGGCAGTGCTAGGGAAGCTAGGTTGCACACAGCAACCTC 2483 Query 114502 ATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAA 114561 |||| || ||||||| | ||| ||||| ||||| || || || |||||||| | Sbjct 2482 ATCCGGTGCACTGTACTCCACAATCTCCGTGCACAAGTTGGAGCTGCGGATGGTGCCTAG 2423 Query 114562 GTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGT 114621 |||||| || || ||| |||||| |||||||| |||||| | || | ||||| Sbjct 2422 GTTCTTCTGGTTGCTCTTGCGGTTACAGTGGTCCTTGTAGAGCATGAACGGATTGCCCGT 2363 Query 114622 CTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGG 114680 |||||| || | || ||||| || | ||||| | || | | || | || | | | Sbjct 2362 CTCCGTCTGAGCCTCGAGAACTGCGTACCAGAGCTTCTGGGCCTTG-ACCTTTTTGCGGC 2304 Query 114681 CTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTG 114740 | || || || ||||||||| || ||||| |||||||| || || | | || | Sbjct 2303 CACGACCTTCGCGCTCGTACTTCTCATACAGGGCCTCAAACTCGTCGCCGTAGACGTCCG 2244 Query 114741 AGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCT 114800 || || || || | ||||| | || | ||| | || || |||||| |||| Sbjct 2243 CCAGACCGGGACACTCGTTGGGGCACATCAGCGTCCACTCGCCGTTCTTCTCAACCCGCT 2184 Query 114801 TCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCAT 114860 ||||||| || || ||||||||||| || ||| ||||| ||| ||| || || | Sbjct 2183 TCATGAACAGATCAGGGATCCAGAGCGCCAGGAACAGATCGCGAGCACGAATCTCCTCCT 2124 Query 114861 CCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGT 114920 || || || |||| || | || || | || ||| || ||||| || || |||| Sbjct 2123 TGCCATGGTTTTTGCGCAGGTCAAGGAACTCAAAGACATCAGCATGCCAAGGCTCTAGGT 2064 Query 114921 ACACCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCTGTGGCAT 114977 | | || | ||| || || |||||| ||||| | || ||| | Sbjct 2063 AGATGCAGAAAGCGCCCGGGCGCTTGTTTCCGCCCTGGTCCACATAGCGAGCCGTGTTGT 2004 Query 114978 TAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TACG 115035 | | || || ||||| || ||||| |||| || ||| ||||| || || || | Sbjct 2003 TGTAGACACGGAGCATAGGGATGATGCCATTGGACGTGCCGTTTGTGCCGGCAATGTAGG 1944 Query 115036 AGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGAT 115095 || | | || | || | |||| || | ||||| || || ||| ||| ||||| Sbjct 1943 AGCC--GGTAGCCCGGATACGGTGGACGTTGAGGCCAATGCCACCAGCCGTCTTGGAGAT 1886 Query 115096 TTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGAT 115155 || || | |||| || | ||||| || || || |||| |||| | | | Sbjct 1885 CATGGCACAGGTCTTGAGGGTGTCATAGATACCCTCAATGCTGTCATCCTTTATGTCCAC 1826 Query 115156 AAGGAAGCAGCTCGACATTTGTGGCCT-TGGTGTACCAGCGTTGAAGAGGGTTGG 115209 |||||||||| |||||||| ||||| |||||| || ||||||||||| || || Sbjct 1825 AAGGAAGCAGGATGACATTTG-GGCCTGTGGTGTGCCGGCGTTGAAGAGTGTCGG 1772 >seq2400 Length=47555 Score = 102 bits (112), Expect = 1e-16 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 ||| || ||||||||||| || || || || || |||||| ||| || ||||| || || Sbjct 7635 GTGCAGGCCCTCGTCACGAGAAATAAGCTCGTTGGAGAAGGTCAGGCCAGGCATCAGGCC 7576 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 |||||||||| |||||| || | | | || | ||| ||||||||| ||||||||| Sbjct 7575 GCGCTTCTTCAGCCAGAAGATGGAAGAGAAGGCACCGCTGAAGAAGATGCCCTCCACAGC 7516 Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAGG 126206 || || || | || |||| |||||||| Sbjct 7515 GGCAAAAGCGACCAGGCGCTGAGCAAAGG 7487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597333536385960