Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12-
22] 2,687 sequences; 28,556,450 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq2494 342 5e-89
>seq2494
Length=11727
Score = 342 bits (378), Expect = 5e-89
Identities = 1129/1726 (65%), Gaps = 56/1726 (3%)
Strand=Plus/Plus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | || |||| ||||| || |||||| ||| ||||| |||||| | ||||||
Sbjct 1589 AACTACCAATATTTTGGTTTCAAGACACTGGAGCGGTCTTACCTACTCAAGCTCGATGGC 1648
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| | || |||||| ||||| || || | |||||||| || | || || || |
Sbjct 1649 AAGATTGTCGAGCGGCCGCAGCACATGATTATGCGCGTGGCAGTTGGCATCTGGGGTGAT 1708
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGC 93893
| || | ||| | | | | || ||||| | |||| | || |||| |
Sbjct 1709 AATGTGGAGCGTGTGGTTGAGACATACAACTACATGTCGAACAAATTCTTCACGCATG-C 1767
Query 93894 CACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT 93953
| | ||||| || |||||||| || || || | | || ||||| || || ||||| |
Sbjct 1768 CTCGCCGACACTCTTCAACGCCGGCACACCACAGGCCCAAATGTCATCCTGCTTCCTTGT 1827
Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013
| | |||| ||| ||| || || | |||| ||||||| |||||| | ||
Sbjct 1828 GGACATAAAGGATGACAGCATTGAGGGTATCTATGACACCCTCAAGACCTGTGCCATGAT 1887
Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCC 94071
||| || || || || || || ||| |||||| |||| || || | || |||
Sbjct 1888 CTCCAAGACGGCTGGTGGCATTGGCCTCAACGTCCAC--CGTATCCGGGCTACCGGCTCC 1945
Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131
||||| ||| || || ||||| ||||| ||| || ||||||||||||| |||| ||||
Sbjct 1946 TACATTGCCGGCACAAACGGCACGTCCAATGGCATCATCCCTATGCTCCGTGTCTACAAC 2005
Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191
||| |||| ||||| ||||||||||| || | | | ||| ||||| ||||
Sbjct 2006 AACACGGCTCGCTATGTGGACCAGGGCGGAAACAAGCGCCCGGGCGCTTTCTGCATCTAC 2065
Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251
|| ||||| ||||| || || || | ||| | |||||||| || ||||| |||||
Sbjct 2066 CTAGAGCCTTGGCATGCTGATGTCTTTGAGTTCCTTGACCTGCGCAAAAACCATGGCAAG 2125
Query 94252 GATCTGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATG 94308
|| ||||| | || | || || ||| || |||||| | || || || || |||
Sbjct 2126 GA---GGAGATTCGTGCTCGCGATCTGTTCCTGGCGCTCTGGATCCCTGATCTGTTCATG 2182
Query 94309 AAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTG 94368
|| || || ||||| ||| || |||| || | || ||||| || |||||||| |||
Sbjct 2183 AAGCGGGTTGAGAAGAACGGCGAGTGGACGCTGATGTGCCCCAACGAGTGTCCCGGTCTG 2242
Query 94369 TCCGACGTTTGTGG-ATCGCGTTTTGAAGACTTGTATGCTCGTTACGA-ATCGCAGGGCA 94426
| ||||| | || || | ||||| | | |||||| ||||| || ||| |
Sbjct 2243 GCGGACGTCTACGGCGACGAG-TTTGAGGCCCTGTATGAGAAGTACGAGCGCGAAGGTCG 2301
Query 94427 AGGC--CAGGAAGGTTATGGATGCTAGGAAGCTGTGGGA-TCAGATCGTGGACGTACAGG 94483
||| || ||||| | | || |||||| ||| | ||| || | || | |||
Sbjct 2302 TGGCCGCAAAAAGGTCA---AGGCCCAGAAGCTCTGGTACGCAGTTC-TCGAGGCTCAGA 2357
Query 94484 TGGAGACGGGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAG 94542
||||||||| | || | ||| | | |||||| | |||| ||| |||| |||||||
Sbjct 2358 CGGAGACGGGCAATCCGTTCATGCTCTACAAGGACCACTGT-AACCGCAAGAGCAACCAG 2416
Query 94543 CAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCT 94602
|| |||| || ||| ||||| || ||||||| |||||||| ||||| | | |
Sbjct 2417 AAGAACCTAGGCACCATCCGCAGCTCCAACTTGTGCACGGAGATTGTGGAGTACAGTGCA 2476
Query 94603 CCGGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGAT 94662
||||| ||| |||||||||| ||||| | ||| | ||| | |||| || |
Sbjct 2477 CCGGATGAGGTTGCTGTGTGCAACCTAGCTTCCCTAGCACTGCCGTCTTTTGT------T 2530
Query 94663 GCCTACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATG 94722
| ||||| | || | ||| ||| | || |||| | | || | |
Sbjct 2531 GACTACA--ACAAC-GAGACGTACGACTTCAAGAAGCTCCACGAGGTTGCACAGCTGCTT 2587
Query 94723 GTCTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAAC 94782
||| ||||||||| | | || || |||| ||||||||| |||||||| ||||||
Sbjct 2588 GTCCGCAACCTGAACCGCATCATTGATGTCAACTACTACCCCGTGCCGGAGGCCGAGAAC 2647
Query 94783 TCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTG 94842
||| || || || || || || | || || ||||| | || || || | ||
Sbjct 2648 AGCAACATGCGCCACCGTCCTATTGGTTTGGGTGTGCAGGGGCTGGCAGATGCTTTCCTG 2707
Query 94843 ATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAA 94902
| |||| |||||| || || ||| || || | || | | || || ||
Sbjct 2708 GCGCTGCGCATGCCCTTTGAGTCGCCCGAGGCACGGGAGCTCAACAAGCAAATCTTTGAG 2767
Query 94903 AGCATTTATTACGGGGCCATGAAACAATCCGT----CCACTTGG-CCAGATCGGACGGCG 94957
| ||| || ||| || | || | ||| | || ||| |||||| || |||
Sbjct 2768 ACCATCTACCACGCCGCTCT----CACTGCGTCGTGCGACCTGGCCCAGAT-TGAGGGC- 2821
Query 94958 GGCCACACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCT 95017
| | ||| ||| || || || || ||||| ||| | ||| |||| | |
Sbjct 2822 ACCTATGCGA--CGTATGAGGGCTCTCCTGTGTCTCAGGGAATTCTGCAGCCCGACATGT 2879
Query 95018 GGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCA--- 95074
||| |||||||| || | |||| |||||||| | || || |||| | ||||
Sbjct 2880 GGGACGTGAAGCCGTCTGACCTGTGGGACTGGGACTCGCTCCG-TCTGAAG--ATCAAGG 2936
Query 95075 AACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGA 95134
| ||||| || ||| ||| | |||||||||||||| || || || ||| ||||||
Sbjct 2937 AGCACGGCGTCCGCAACAGTCTGTTGGTGGCCCCCATGCCAACAGCGTCGACGTCGCAGA 2996
Query 95135 TCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGC 95194
|||| ||||||||||| | ||||| || | ||| |||||| | ||| | || ||||
Sbjct 2997 TCCTGGGCAACAACGAATGCTTCGAGCCGTACACGTCCAACATCTACTCGCGCCGTGTGC 3056
Query 95195 TCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGT--CTCTGGG 95252
| || || || || | || ||||| | || || ||| || ||| | ||||
Sbjct 3057 TGGCGGGCGAGTTTCAGGTTGTCAACCCGTGGCTGCTGAAGGATCT--CGTTGATATGGG 3114
Query 95253 TGTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACAT 95312
||||| ||||| | ||||||| | | || ||| || ||||||||||
Sbjct 3115 GCTGTGGTCGGACAACATGAAGAACCGCATCATTGCCGAGGGCGGTTCGATCCAGAACAT 3174
Query 95313 CCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372
||| | || |||| ||||||||||| || ||||||||||| ||||||||| |||||||
Sbjct 3175 CCCCAACATCCCGGCCGACATCAAGGCTCTGTACAAGACCGTTTGGGAGATCTCGCAGCG 3234
Query 95373 CGTGATACTCGACCACGCGGCCGCCCGCGGGCCCTTCATCTGCCAG 95418
| ||| | | ||||||| ||| || | |||||| ||||
Sbjct 3235 CACGATTGTGCAGATGGCGGCCGACCGTGGCGCGTTCATCGACCAG 3280
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494706583484520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |