Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12-
22] 2,687 sequences; 28,556,450 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq2494 183 3e-41
seq2379 104 2e-17
>seq2494
Length=11727
Score = 183 bits (202), Expect = 3e-41
Identities = 741/1148 (65%), Gaps = 46/1148 (4%)
Strand=Plus/Minus
Query 152831 CTGATCTATGAAAGCGTTACGGTCGGCCGCCATCT---CAATCATGCGTTTTGCCTTCAT 152887
||| || ||||| ||| ||||||||||||||||| ||||| |||| | | ||
Sbjct 3280 CTGGTCGATGAACGCGCCACGGTCGGCCGCCATCTGCACAATCGTGCGCTGCGAG---AT 3224
Query 152888 CTCCCAGGCGGTTTTGTACAAATTTTTAACGCTATCCGGTATACCTTCAATGTTCTGAAT 152947
|||||| |||| ||||||| | || | | |||| || |||||||| ||
Sbjct 3223 CTCCCAAACGGTCTTGTACAGAGCCTTGATGTCGGCCGGGATGTTGGGGATGTTCTGGAT 3164
Query 152948 AGA---GCCCTTGTGTGCAAAAATAGCGTTTCGT-ATTTCGGGCGTGTACACGTTCAGTT 153003
|| ||||| | |||| || ||| ||| | || | | || ||| || |
Sbjct 3163 CGAACCGCCCTCG---GCAATGAT-GCGGTTCTTCATGTTGTCCGACCACAGCCCCATAT 3108
Query 153004 TAATGAGGTCATCGATCAAGTACTGGTTGACCACTTGAAACTCGCCCGCCAACACTCGTC 153063
|| ||| || | | || || ||||||| || |||||||||||||||| ||| || |
Sbjct 3107 CAACGAGATCCTTCAGCAGCCACGGGTTGACAACCTGAAACTCGCCCGCCAGCACACGGC 3048
Query 153064 TCAAATATACATTGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCG 153123
| | || | ||| ||| | || || ||| ||||||| ||||| || || || | ||
Sbjct 3047 GCGAGTAGATGTTGGACGTGTACGGCTCGAAGCATTCGTTGTTGCCCAGGATCTGCGACG 2988
Query 153124 TGGTTGCGGTCGGCATGTACGCCACCAACAAAGAATTCCGCAAGCCGTGC-GCTCGAATG 153182
| | || || |||||| |||||||||| | || || | ||||||| || ||
Sbjct 2987 TCGACGCTGTTGGCATGGGGGCCACCAACAGACTGTTGCGGACGCCGTGCTCCTTGA--- 2931
Query 153183 TCGTCCTTC--AACGCCTGCCAATCCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGT 153240
|| || | | || | ||| |||||||| | ||||| || ||| ||||||||||
Sbjct 2930 TCTTCAGACGGAGCGAGTCCCAGTCCCACAGGTCAGACGGCTTCACGTCCCACATGTCGG 2871
Query 153241 ACTGTAACACTCCTCGACTGGCGGGACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTT 153300
||| | | ||| || | ||| ||| || |||| ||| |||| || |
Sbjct 2870 GCTGCAGAATTCCCTGAGACACAGGAGAGCCCTCATACGTCGCATAGGTGCCCTCAATCT 2811
Query 153301 GGGCCAGTTCGCAGCTAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTAT 153360
||||||| ||||| || ||| ||| | | ||| ||||| || |||||| || |
Sbjct 2810 GGGCCAGGTCGCACGACGCAGTGAGAGCGGCGTGGTAGATGGTCTCAAAGATTTGCTTGT 2751
Query 153361 TGAGAACGGCCGCTTCTTCG---CTCTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGG 153417
|||| | ||| | | ||| ||| | |||||||||||| || || || || |
Sbjct 2750 TGAG--CTCCCG-TGCCTCGGGCGACTCAAAGGGCATGCGCAGCGCCAGGAAAGCATCTG 2694
Query 153418 CCAGACCCTGGATACCGACGCCGATGGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCT-C 153476
|||| ||||| | ||| | || || || || || | ||||||| |||| || |
Sbjct 2693 CCAGCCCCTGCACACCCAAACCAATAGGACGGTGGCGCATGTTGCTG-TTCTCGGCCTCC 2635
Query 153477 GCTATGGGATAGTGATTGCGATCGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTT 153536
| | ||| |||| ||| ||| || || ||| |||||||| || | || | |
Sbjct 2634 GGCACGGGGTAGTAGTTGACATCAATGATGCGGTTCAGGTTGCGGACAAGCAGCTGTGCA 2575
Query 153537 ATCGCCTTAAGTTTCTCGAAATCATAGGTCATTTCGTCGACGCGTACGCATCGATTCACG 153596
| | | | || |||| ||| || || ||| |||| | ||| || | | |||
Sbjct 2574 ACCTCGTGGAGCTTCTTGAAGTCGTACGTC---TCGTTG--TTGTAGTCAACAAAAGACG 2520
Query 153597 GCA-----ATAGACGCCAGATTACAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGA 153651
||| | || || || || || || || ||| || | | ||||||| ||| |
Sbjct 2519 GCAGTGCTAGGGAAGCTAGGTTGCACACAGCAACCTCATCCGGTGCACTGTACTCCACAA 2460
Query 153652 TCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGAT 153711
|||| | ||| | |||| || ||| ||| | || | ||| ||||| ||||| |
Sbjct 2459 TCTCCGTGCACAAGTTGGAGCTGCGGATGGTGCCTAGGTTCTTCTGGTTGCTCTTGCGGT 2400
Query 153712 TGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGATAA 153771
| || ||| ||| |||||||| |||| ||| ||||| || | |||| ||
Sbjct 2399 TACAGTGGTCCTTGTAGAGCATGAACGGATTGCCCGTCTCCGTCTGAGCCTCGA-GAACT 2341
Query 153772 ACCTA-TGCAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGC 153830
| || || | ||| || ||| | || || || |||| |||||| |
Sbjct 2340 GCGTACCAGAGCTTCTGGGCCTTGACCTTTTTGCGGCCACGACCTTCGCGCTCGTACTTC 2281
Query 153831 TCGTACAGTCGCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGA 153890
|| ||||| ||||||||||||||||||| ||| || || |||||||||| | ||
Sbjct 2280 TCATACAGGGCCTCAAACTCGTCGCCGTAGACGTCCGCCAGACCGGGACACTCGTTGGGG 2221
Query 153891 CACATCAGCGACCACATATCGTCGGCGTT---GACGCGTCGCATGAACAGATCCGGCACC 153947
|||||||||| |||| ||| || || || || |||||||||||| || | |
Sbjct 2220 CACATCAGCGTCCAC---TCGCCGTTCTTCTCAACCCGCTTCATGAACAGATCAGGGATC 2164
Query 153948 CAGAGCGC 153955
||||||||
Sbjct 2163 CAGAGCGC 2156
>seq2379
Length=13478
Score = 104 bits (114), Expect = 2e-17
Identities = 163/230 (71%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
||||| |||| ||||| || | ||| | | | |||||||| || |||||||| |||
Sbjct 4559 CCGCCACGCAGACGCAGGACGAGATGCAGGGTGGACTCCTTCTGGATGTTGTAATCGGAG 4618
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || ||||||||| || || |||| | | || |||||||| || ||||| ||
Sbjct 4619 AGCGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAAATCAGACGCTGCTGATCCGGGGGG 4678
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565
|| || || ||||| ||| | || | || | |||| | | ||| || | ||||| |
Sbjct 4679 ATGCCCTCCTTGTCC-TGAATCTTGGACTTGACGTTGT-CGATGGTATCAGAAGACTCGA 4736
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615
|||||| || | || || || || || || || || ||||||||||||
Sbjct 4737 CCTCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTGACGAAAATCTGCATG 4786
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496245731786640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |