Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12- 22] 2,687 sequences; 28,556,450 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq2494 183 3e-41 seq2379 104 2e-17 >seq2494 Length=11727 Score = 183 bits (202), Expect = 3e-41 Identities = 741/1148 (65%), Gaps = 46/1148 (4%) Strand=Plus/Minus Query 152831 CTGATCTATGAAAGCGTTACGGTCGGCCGCCATCT---CAATCATGCGTTTTGCCTTCAT 152887 ||| || ||||| ||| ||||||||||||||||| ||||| |||| | | || Sbjct 3280 CTGGTCGATGAACGCGCCACGGTCGGCCGCCATCTGCACAATCGTGCGCTGCGAG---AT 3224 Query 152888 CTCCCAGGCGGTTTTGTACAAATTTTTAACGCTATCCGGTATACCTTCAATGTTCTGAAT 152947 |||||| |||| ||||||| | || | | |||| || |||||||| || Sbjct 3223 CTCCCAAACGGTCTTGTACAGAGCCTTGATGTCGGCCGGGATGTTGGGGATGTTCTGGAT 3164 Query 152948 AGA---GCCCTTGTGTGCAAAAATAGCGTTTCGT-ATTTCGGGCGTGTACACGTTCAGTT 153003 || ||||| | |||| || ||| ||| | || | | || ||| || | Sbjct 3163 CGAACCGCCCTCG---GCAATGAT-GCGGTTCTTCATGTTGTCCGACCACAGCCCCATAT 3108 Query 153004 TAATGAGGTCATCGATCAAGTACTGGTTGACCACTTGAAACTCGCCCGCCAACACTCGTC 153063 || ||| || | | || || ||||||| || |||||||||||||||| ||| || | Sbjct 3107 CAACGAGATCCTTCAGCAGCCACGGGTTGACAACCTGAAACTCGCCCGCCAGCACACGGC 3048 Query 153064 TCAAATATACATTGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCG 153123 | | || | ||| ||| | || || ||| ||||||| ||||| || || || | || Sbjct 3047 GCGAGTAGATGTTGGACGTGTACGGCTCGAAGCATTCGTTGTTGCCCAGGATCTGCGACG 2988 Query 153124 TGGTTGCGGTCGGCATGTACGCCACCAACAAAGAATTCCGCAAGCCGTGC-GCTCGAATG 153182 | | || || |||||| |||||||||| | || || | ||||||| || || Sbjct 2987 TCGACGCTGTTGGCATGGGGGCCACCAACAGACTGTTGCGGACGCCGTGCTCCTTGA--- 2931 Query 153183 TCGTCCTTC--AACGCCTGCCAATCCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGT 153240 || || | | || | ||| |||||||| | ||||| || ||| |||||||||| Sbjct 2930 TCTTCAGACGGAGCGAGTCCCAGTCCCACAGGTCAGACGGCTTCACGTCCCACATGTCGG 2871 Query 153241 ACTGTAACACTCCTCGACTGGCGGGACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTT 153300 ||| | | ||| || | ||| ||| || |||| ||| |||| || | Sbjct 2870 GCTGCAGAATTCCCTGAGACACAGGAGAGCCCTCATACGTCGCATAGGTGCCCTCAATCT 2811 Query 153301 GGGCCAGTTCGCAGCTAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTAT 153360 ||||||| ||||| || ||| ||| | | ||| ||||| || |||||| || | Sbjct 2810 GGGCCAGGTCGCACGACGCAGTGAGAGCGGCGTGGTAGATGGTCTCAAAGATTTGCTTGT 2751 Query 153361 TGAGAACGGCCGCTTCTTCG---CTCTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGG 153417 |||| | ||| | | ||| ||| | |||||||||||| || || || || | Sbjct 2750 TGAG--CTCCCG-TGCCTCGGGCGACTCAAAGGGCATGCGCAGCGCCAGGAAAGCATCTG 2694 Query 153418 CCAGACCCTGGATACCGACGCCGATGGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCT-C 153476 |||| ||||| | ||| | || || || || || | ||||||| |||| || | Sbjct 2693 CCAGCCCCTGCACACCCAAACCAATAGGACGGTGGCGCATGTTGCTG-TTCTCGGCCTCC 2635 Query 153477 GCTATGGGATAGTGATTGCGATCGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTT 153536 | | ||| |||| ||| ||| || || ||| |||||||| || | || | | Sbjct 2634 GGCACGGGGTAGTAGTTGACATCAATGATGCGGTTCAGGTTGCGGACAAGCAGCTGTGCA 2575 Query 153537 ATCGCCTTAAGTTTCTCGAAATCATAGGTCATTTCGTCGACGCGTACGCATCGATTCACG 153596 | | | | || |||| ||| || || ||| |||| | ||| || | | ||| Sbjct 2574 ACCTCGTGGAGCTTCTTGAAGTCGTACGTC---TCGTTG--TTGTAGTCAACAAAAGACG 2520 Query 153597 GCA-----ATAGACGCCAGATTACAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGA 153651 ||| | || || || || || || || ||| || | | ||||||| ||| | Sbjct 2519 GCAGTGCTAGGGAAGCTAGGTTGCACACAGCAACCTCATCCGGTGCACTGTACTCCACAA 2460 Query 153652 TCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGAT 153711 |||| | ||| | |||| || ||| ||| | || | ||| ||||| ||||| | Sbjct 2459 TCTCCGTGCACAAGTTGGAGCTGCGGATGGTGCCTAGGTTCTTCTGGTTGCTCTTGCGGT 2400 Query 153712 TGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGATAA 153771 | || ||| ||| |||||||| |||| ||| ||||| || | |||| || Sbjct 2399 TACAGTGGTCCTTGTAGAGCATGAACGGATTGCCCGTCTCCGTCTGAGCCTCGA-GAACT 2341 Query 153772 ACCTA-TGCAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGC 153830 | || || | ||| || ||| | || || || |||| |||||| | Sbjct 2340 GCGTACCAGAGCTTCTGGGCCTTGACCTTTTTGCGGCCACGACCTTCGCGCTCGTACTTC 2281 Query 153831 TCGTACAGTCGCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGA 153890 || ||||| ||||||||||||||||||| ||| || || |||||||||| | || Sbjct 2280 TCATACAGGGCCTCAAACTCGTCGCCGTAGACGTCCGCCAGACCGGGACACTCGTTGGGG 2221 Query 153891 CACATCAGCGACCACATATCGTCGGCGTT---GACGCGTCGCATGAACAGATCCGGCACC 153947 |||||||||| |||| ||| || || || || |||||||||||| || | | Sbjct 2220 CACATCAGCGTCCAC---TCGCCGTTCTTCTCAACCCGCTTCATGAACAGATCAGGGATC 2164 Query 153948 CAGAGCGC 153955 |||||||| Sbjct 2163 CAGAGCGC 2156 >seq2379 Length=13478 Score = 104 bits (114), Expect = 2e-17 Identities = 163/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| |||| ||||| || | ||| | | | |||||||| || |||||||| ||| Sbjct 4559 CCGCCACGCAGACGCAGGACGAGATGCAGGGTGGACTCCTTCTGGATGTTGTAATCGGAG 4618 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||||||| || || |||| | | || |||||||| || ||||| || Sbjct 4619 AGCGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAAATCAGACGCTGCTGATCCGGGGGG 4678 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 || || || ||||| ||| | || | || | |||| | | ||| || | ||||| | Sbjct 4679 ATGCCCTCCTTGTCC-TGAATCTTGGACTTGACGTTGT-CGATGGTATCAGAAGACTCGA 4736 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 |||||| || | || || || || || || || || |||||||||||| Sbjct 4737 CCTCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTGACGAAAATCTGCATG 4786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496245731786640