Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12- 22] 2,687 sequences; 28,556,450 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq2494 223 4e-53 seq2400 96.9 4e-15 >seq2494 Length=11727 Score = 223 bits (246), Expect = 4e-53 Identities = 1179/1852 (64%), Gaps = 63/1852 (3%) Strand=Plus/Minus Query 115526 TGAACTGAATGGGTCT---CGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGA 115582 ||||||| ||||| || || || |||| | || ||||||||||| |||||||| | Sbjct 3419 TGAACTGGATGGG-CTGGGCGGCT--GCCTGCGTGCGCAGGTAGTACATTCCCGTCTTCA 3363 Query 115583 GCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTTTC-C 115641 | ||| |||||||| | | ||||| | | |||| | || ||| || | | Sbjct 3362 GGCCCAGCTTCCAGCCGGTGAAGTGCATGCTTGTGATCTTGCCCA-TGGTGGGCTCACGC 3304 Query 115642 ATGAAGAGGTTCATACTTTGGGATTGATCGATGAA-GCGTCCCCGATCCGCCGCCATATC 115700 ||| | ||| | || || || |||||||| ||| || || || |||||||| | Sbjct 3303 ATGTGAATGTTGAGCGACTGCGACTGGTCGATGAACGCG-CCACGGTCGGCCGCCATCTG 3245 Query 115701 AATCACATCCTTCAT--CTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCT 115758 | || ||| | | | ||| ||||| || || |||| || ||| || || | Sbjct 3244 CA-CA-ATCGTGCGCTGCGAGATCTCCCAAACGGTCTTGTACAGAGCCTTGATGTCGGCC 3187 Query 115759 GGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTGACCATGA---GATCCTTCATA 115815 ||||| | ||| || ||||| || || || || | | |||| | | |||||| Sbjct 3186 GGGATGTTGGGGATGTTCTGGATCGAACCGCC---CTCGGCAATGATGCGGTTCTTCATG 3130 Query 115816 TCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGAGGTGCTTATTGACAACAACA 115875 | | ||||| || || || | |||||||| || || | |||||||| | Sbjct 3129 TTGTCCGACCACAGCCCCATATCAACGAGATCCTTCAGCAGCCACGGGTTGACAACCTGA 3070 Query 115876 AACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCA 115935 ||||| ||||| || || | | |||||||||| |||||| ||||| ||||| || Sbjct 3069 AACTCGCCCGCCAGCACACGGCGCGAGTAGATGTTGGACGTGTACGGCTCGAAGCATTCG 3010 Query 115936 TTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTG 115995 ||||| |||| ||| || | || || ||||| |||||||| |||| | || |||||| Sbjct 3009 TTGTTGCCCAGGATCTGCGACGTCGACGCTGTTGGCATGGGGGCCACCAACAGACTGTTG 2950 Query 115996 CGGAGACCCACCCCCCTAATGCGTTCCTT--GAGGGCGTCCCAGTCGTA--GTTGAGCTT 116051 |||| || | || | || ||| ||| | ||||||||| | | | || Sbjct 2949 CGGACGCCGTGCTCCTTGATC--TTCAGACGGAGCGAGTCCCAGTCCCACAGGTCAGAC- 2893 Query 116052 TGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAA 116111 | || | | |||||||| || ||| || || || || ||| | || || |||||| | Sbjct 2892 -GGCTTCACGTCCCACATGTCGGGCTGCAGAATTCCCTGAGACACAGGAGAGCCCTCATA 2834 Query 116112 TGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATA 116171 ||| |||| | |||||||| || |||| ||| | ||| ||| || ||||| || Sbjct 2833 CGTCGCATAGGTGCCCTCAATCTGGGCCAGGTCGCACGACGCAGTGAGAGCGGCGTGGTA 2774 Query 116172 CATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACG 116231 || |||||||| || | || | || |||||| || ||||| | | || Sbjct 2773 GATGGTCTCAAAGATTTGCTTGTTGAGCTCCCGTGCCTCGGGCGACTCAAAGGGCATGCG 2714 Query 116232 GCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCAT 116291 | | || |||| || || || || ||||| | ||||| || || || | ||| Sbjct 2713 CAGCGCCAGGAAAGCATCTGCCAGCCCCTGCACACCCAAACCAATAGGACGGTGGCGCAT 2654 Query 116292 ATTAGACTTTCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAG 116348 || | ||| ||| |||| ||||| || | || ||| || | | || || Sbjct 2653 GTT-GCTGTTCT--CGGCCTCCGGCACGGGGTAGTAGTTGACATCAATGATGCGGTTCAG 2597 Query 116349 ATTTTTGGTGACAACCTT-TGTG--ATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGT 116405 || | ||||| | |||| | || || ||||| | | | || | || Sbjct 2596 GTT---GCGGACAAGCAGCTGTGCAACCTCGTGGAGCTTCTTGAAGTCGTAC------GT 2546 Query 116406 CTCTTCATTG------ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGT 116459 ||| | ||| ||| | || || || | || || || || ||||||| Sbjct 2545 CTCGTTGTTGTAGTCAACAAAAGACGGCAGTGCTAGGGAAGCTAGGTTGCACACAGCAAC 2486 Query 116460 CTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCC 116519 ||||||| || ||||||| | ||| ||||| ||||| || || || |||||||| Sbjct 2485 CTCATCCGGTGCACTGTACTCCACAATCTCCGTGCACAAGTTGGAGCTGCGGATGGTGCC 2426 Query 116520 CAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCC 116579 | |||||| || || ||| |||||| |||||||||||||| | || | || Sbjct 2425 TAGGTTCTTCTGGTTGCTCTTGCGGTTACAGTGGTCCTTGTAGAGCATGAACGGATTGCC 2366 Query 116580 CGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGT 116638 ||||||||| || | || ||||| || | ||| | | || | | || | || | | Sbjct 2365 CGTCTCCGTCTGAGCCTCGAGAACTGCGTACCAGAGCTTCTGGGCCTTG-ACCTTTTTGC 2307 Query 116639 TGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCT 116698 | | || || || ||||||||| || |||||||||||||| || || | | Sbjct 2306 GGCCACGACCTTCGCGCTCGTACTTCTCATACAGGGCCTCAAACTCGTCGCCGTAGACGT 2247 Query 116699 CTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCC 116758 | | || || || || | || || | || | ||| | || || |||||||| Sbjct 2246 CCGCCAGACCGGGACACTCGTTGGGGCACATCAGCGTCCACTCGCCGTTCTTCTCAACCC 2187 Query 116759 GCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTT 116818 |||||||||| || || ||||||||||||||| ||| ||||| ||| ||| || | Sbjct 2186 GCTTCATGAACAGATCAGGGATCCAGAGCGCCAGGAACAGATCGCGAGCACGAATCTCCT 2127 Query 116819 CATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCA 116878 | | || || || |||| || | || || | || ||| || ||||| || || | Sbjct 2126 CCTTGCCATGGTTTTTGCGCAGGTCAAGGAACTCAAAGACATCAGCATGCCAAGGCTCTA 2067 Query 116879 GGTACACCGCGATTGACCCCTTGCG---ACGACCAGCCTGGTTTACATACCTCGCCGTTG 116935 |||| | || | ||| ||| || |||||| ||||| | ||||| Sbjct 2066 GGTAGATGCAGAAAGCGCCCGGGCGCTTGTTTCCGCCCTGGTCCACATAGCGAGCCGTGT 2007 Query 116936 CGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--T 116993 ||| | || || ||||| || ||||| |||| || ||| ||||| || || | Sbjct 2006 TGTTGTAGACACGGAGCATAGGGATGATGCCATTGGACGTGCCGTTTGTGCCGGCAATGT 1947 Query 116994 ACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGA 117053 | ||| | | | || | || | ||||| || | ||||| || || ||| ||| || Sbjct 1946 AGGAGCC--GGTAGCCCGGATACGGTGGACGTTGAGGCCAATGCCACCAGCCGTCTTGGA 1889 Query 117054 GATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGC 117113 ||| || || | |||| || | ||||| || || || |||| |||| | | Sbjct 1888 GATCATGGCACAGGTCTTGAGGGTGTCATAGATACCCTCAATGCTGTCATCCTTTATGTC 1829 Query 117114 GATGAGGAAGCAGCTCGACATTTGTGGCCT-TGGTGTACCAGCGTTGAAGAGGGTTGGTG 117172 | ||||||||| |||||||| ||||| |||||| || ||||||||||| || || | Sbjct 1828 CACAAGGAAGCAGGATGACATTTG-GGCCTGTGGTGTGCCGGCGTTGAAGAGTGTCGGCG 1770 Query 117173 TCGCGTGGATGAACATACCTTGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGT 117232 || || |||| | | ||||| | | ||| ||||| | ||| | | Sbjct 1769 AGGCATGCGTGAAGAATTTGTTCGACATGTAGTTGTATGTCTCAACCACACGCTCCACAT 1710 Query 117233 CTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGA 117292 || || || || | || || ||||||| ||||| || || || | | Sbjct 1709 TATCACCCCAGATGCCAACTGCCACGCGCATAATCATGTGCTGCGGCCGCTCGACAATCT 1650 Query 117293 TACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATA 117344 | ||||||||| | | |||||| | ||||| ||||||| ||||||||| Sbjct 1649 TGCCATCGAGCTTGAGTAGGTAAGACCGCTCCAGTGTCTTGAAACCAAAATA 1598 >seq2400 Length=47555 Score = 96.9 bits (106), Expect = 4e-15 Identities = 296/455 (65%), Gaps = 12/455 (3%) Strand=Plus/Minus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 |||||| ||||| ||||||||||||||||| ||||| ||| | ||| ||| |||||||| Sbjct 7935 GTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCCAGGGAGATGTTCTCCAT 7876 Query 127291 AAAATCAAATGGGTTCTTTGA---GTTC--CAAATTGTTGGC-ACCCCAATCTGTTTGAG 127344 || || || ||||| | || || | | || ||| | | ||| | || Sbjct 7875 GAAGTCGAAGGGGTTGGTGGAACGGTACACCTTATCATTGCCGAGGGCAACC------AG 7822 Query 127345 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG 127404 || || || | ||| |||||||||||| ||| |||||||| |||| || Sbjct 7821 AAGGCGGTCGGCAACGAACTCAATGTACTGCTTCATGAGTGTGGAGTTCATGCCGAGCAG 7762 Query 127405 GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGAT 127464 || || || || || || |||| ||| |||||| | ||||| || | || Sbjct 7761 AGCGCAGGGAAGGGCCTCGGTGAGGAACTCCTGCTCAATCTTGACAGCATCGACGATTAT 7702 Query 127465 GGCGTGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTTGAAGAGTTCCACAGCAAA 127524 | || || | ||| | || | || | | ||| || ||| || Sbjct 7701 CTCCTGGATCATCTCCTTGCTGGGGCGGTTCTTCAGATGAGAGAACAGCAGGCAAGCGAA 7642 Query 127525 CTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCAT 127584 || ||| || ||||||||||| || || || || || |||||| ||| || ||||| Sbjct 7641 GTCGGTGTGCAGGCCCTCGTCACGAGAAATAAGCTCGTTGGAGAAGGTCAGGCCAGGCAT 7582 Query 127585 GAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTC 127644 || || |||||||||| |||||| || | | | || | || ||||||||| ||||| Sbjct 7581 CAGGCCGCGCTTCTTCAGCCAGAAGATGGAAGAGAAGGCACCGCTGAAGAAGATGCCCTC 7522 Query 127645 CACACACGCGAACGCAAATAGACGCTCGGCAAAGG 127679 |||| || || || | || |||| ||||||| Sbjct 7521 CACAGCGGCAAAAGCGACCAGGCGCTGAGCAAAGG 7487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613486593826920