Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12-
22] 2,687 sequences; 28,556,450 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq2494 147 3e-30
>seq2494
Length=11727
Score = 147 bits (162), Expect = 3e-30
Identities = 451/682 (66%), Gaps = 14/682 (2%)
Strand=Plus/Minus
Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTT-CTCAGATAGTACATGC 203897
|| ||| ||||||||||| |||| | |||| | ||||| | | ||| |||||||| |
Sbjct 3430 CTGGTCGACCGTGAACTGGATGGGCTGGGCGGCTG-CCTGCGTGCGCAGGTAGTACATTC 3372
Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGG 203957
| ||||| |||||| || ||| ||| | ||||||| | | |||| || | |||
Sbjct 3371 CCGTCTTCAGGCCCAGCTTCCAGCCGGTGAAGTGCATGCTTGTGATCTTGCCCATGGTGG 3312
Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCG 204016
| || |||||||||||| || ||||| ||||||||| || ||||| || || ||
Sbjct 3311 GCTCACGCATGTGAATGTTGAGCGACTGCGACTGGTCGATG-AACGCGCCACGGTCGGCC 3253
Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTG 204076
||||| | | ||| || |||||| |||||||| || |||||| ||| | || ||
Sbjct 3252 GCCATCTGCACAATCGTGCGCTGCGAGATCTCCCAAACGGTCTTGTACAGAGCCTTGATG 3193
Query 204077 TGTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCCT 204135
| || | | | | || || |||||| ||| ||||| || | | || |
Sbjct 3192 TCGGCCGGGATGT-TGGGGATGTTCTGGATCGAACCGCCCTCGGCAATGATGCGGTTCTT 3134
Query 204136 CGTCTCCTCCCCCCACATGCCCAACCTGATC-AGCTCCCGCACCAGGTGGGGGTTGATGA 204194
| | | ||| ||||| |||| | | | | || ||| || ||| ||||||| |
Sbjct 3133 CATGTTGTCCGACCACA-GCCCCATATCAACGAGATCCTTCAGCAGCCACGGGTTGACAA 3075
Query 204195 TCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACG 204254
|||||| || || | |||||| | || | | | | |||| ||| | || |||||
Sbjct 3074 CCTGAAACTCGCCCGCCAGCACACGGCGCGAGTAGATGTTGGACGTGTACGGCTCGAAGC 3015
Query 204255 CCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGG 204314
||||||||||| | ||||| | || || || |||||||| |||| | |||
Sbjct 3014 ATTCGTTGTTGCCCAGGATCTGCGACGTCGACGCTGTTGGCATGGGGGCCACCAACAGAC 2955
Query 204315 AGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGCAC 204374
|||||| || |||| | | || | | | || ||| |||||| || ||
Sbjct 2954 TGTTGCGGACGCCGTGCTCCTTGATCTTCAGACGGAGCGAGTCCCAGTCCCACAGGTCAG 2895
Query 204375 TGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTTGT 204434
|| |||||| ||||||||||| ||| | || || ||| || || ||||| |
Sbjct 2894 ACGGCTTCACGTCCCACATGTCGGGCTGCAGAATTCCCTGAGACACAGGAGAGCCCTCAT 2835
Query 204435 ACGTCGGATAAGGCTGATCCTC-TTCT--GCCAGCTTGCACGAGGCGGCCATGGCGTGAT 204491
|||||| ||| | || |||| ||| ||||| | |||||| || | | ||| |
Sbjct 2834 ACGTCGCATA--GGTG-CCCTCAATCTGGGCCAGGTCGCACGACGCAGTGAGAGCGGCGT 2778
Query 204492 AGTACATGGTCTCAAAGATCTG 204513
||| |||||||||||||| ||
Sbjct 2777 GGTAGATGGTCTCAAAGATTTG 2756
Score = 105 bits (116), Expect = 1e-17
Identities = 342/519 (66%), Gaps = 14/519 (3%)
Strand=Plus/Minus
Query 204883 CTCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGA 204942
|||||| ||||| ||||||||||| || | || | | || ||||||
Sbjct 2467 CTCCACAATCTCCGTGCACAAGTTGGAGCTGCGGATGGTGCCTAGGTTCTTCTGGTTGCT 2408
Query 204943 CTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGA-TC 205001
||||||||||||| ||||||||| | ||||||||| | || ||||| |||||| ||
Sbjct 2407 CTTGCGGTTACAGTGGTCCTTGTAGAGCATGAACGGATTGCCCGTCTCCGTCTGAGCCTC 2348
Query 205002 GCAGAATGTGGGT-CCACAATTCGCGAGCCTCCACTTGCTTCACGT-ACATCCCTTGAGA 205059
| |||| || || ||| | | | |||| || | || | || || | | |
Sbjct 2347 G-AGAAC-TGCGTACCAGAGCTTCTGGGCCTTGACCTTTTTGCGGCCACGACCTTCGCG- 2291
Query 205060 CTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGCCCTGGACA 205119
|||||| || ||||| ||| |||| || ||||| |||||| ||| || |||||
Sbjct 2290 CTCGTACTTCTCATACAGGGCCTCAAACTCGTCGCCGTAGACGTCCGCCAGACCGGGACA 2231
Query 205120 TTTTTTGGGACACATCAGAGACCACAT-CTGATCGTCTTTCACCCTCTCCATAAACAGGT 205178
| ||||| |||||||| | |||| | | || ||| |||| || ||| ||||| |
Sbjct 2230 CTCGTTGGGGCACATCAGCGTCCACTCGCCGTTCTTCTCA-ACCCGCTTCATGAACAGAT 2172
Query 205179 CGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTCT 205238
| |||||| || | |||||||| || || | ||| | || | ||| |||| |
Sbjct 2171 CAGGGATCCAGAGCGCCAGGAACAGATCGCGAGCACGAATCTCCTCCTTGCCATGGTTTT 2112
Query 205239 TTTTCAAGTCCAGCCAAGCCGCAATG---TCGGCGTGCCACGGCTCTAACCACACGGCCA 205295
| || ||| || | | ||| | || || ||||| ||||||| | | | |
Sbjct 2111 TGCGCAGGTCAAGGAA---CTCAAAGACATCAGCATGCCAAGGCTCTAGGTAGATGCAGA 2055
Query 205296 TTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTC 205355
||||| || | |||||| || ||||||||||| ||||| | | |||| | || |
Sbjct 2054 AAGCGCCCGGGCGCTTGTTTCCGCCCTGGTCCACATAGCGAGCCGTGTTGTTGTAGACAC 1995
Query 205356 GCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGC 205394
| ||||| || | | || |||| || ||||| ||||
Sbjct 1994 GGAGCATAGGGATGATGCCATTGGACGTGCCGTTTGTGC 1956
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795128492724720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |