Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12-
22] 2,687 sequences; 28,556,450 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq2400 181 1e-40
seq2379 150 2e-31
seq1920 102 8e-17
>seq2400
Length=47555
Score = 181 bits (200), Expect = 1e-40
Identities = 206/276 (75%), Gaps = 3/276 (1%)
Strand=Plus/Minus
Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226
||||||||||||||| || || | || ||||| ||||||||||| ||| || ||
Sbjct 7318 GTAGGTGTCGATGAGCAGGGAGTATGTCTCGGAGTGGACGTTCTCCATCATGATCTGGAA 7259
Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATT 133286
|||||||||||| || ||||| |||||| || || | ||| ||||| || || ||
Sbjct 7258 GCCGTAAAAGCAGCGAGCCTCCGGCACCTGGACCTCAGCACTGAAGCGCTCAACTAGGTT 7199
Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCG 133346
|||||||||||||||||| |||||| || || ||||| | |||| || ||| |||
Sbjct 7198 CTCGTTGACGATGCCGTCGGAGGCGGCAAAGAACGCCAGGATGTGCGAGACGAAGAAGCG 7139
Query 133347 CTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTC 133403
||| | ||||||| ||| | ||||||| || |||||||| ||||| | ||||||
Sbjct 7138 CTCATCATCGTTCAGGCGGTTGTTCCAGTCGTGCAGATCCTTGGAGAGGTCGATCTCCTC 7079
Query 133404 GACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439
| ||||| ||||| |||||| || ||||||||
Sbjct 7078 AGCAGTCCAGAACGAAGCCTCGTGCTTCTTGTACAT 7043
>seq2379
Length=13478
Score = 150 bits (166), Expect = 2e-31
Identities = 173/230 (75%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || ||||| || || || || || ||| | || || ||| | |
Sbjct 4101 ATGCAGATTTTCGTCAAGACGCTGACAGGGAAGACGATTACCTTGGAGGTTGAGTCATCA 4042
Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | || |||| | || || || | ||||| ||||| |||||| | |||||
Sbjct 4041 GATACGATTGACAACG-TGAAGTCGAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCA 3983
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||||||||||| |||||||| |||||||| |||| ||||||||| ||||||||
Sbjct 3982 GCAGCGGCTCATTTTTGCGGGCAAGCAGCTGGAGGACGGCCGCACCCTCTCGGACTACAA 3923
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472
||||| |||||| |||||||||| ||||||| ||| || | |||||||
Sbjct 3922 TATCCAGAAGGAATCGACGCTGCACCTGGTGCTTCGTCTGCGTGGCGGCC 3873
Score = 131 bits (144), Expect = 2e-25
Identities = 160/216 (74%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || ||||| || ||||| |||||||| | || |||||| | |
Sbjct 4557 ATGCAGATCTTCGTCAAGACGCTGACTGGCAAGACCATCACTCTGGAGGTCGAGTCGTCG 4498
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || || |||| ||||| ||||| || || |||||||
Sbjct 4497 GACACCATCGATAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCACCCGACCA 4439
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| || |||| ||| ||||| ||||| || || | || ||||| ||||||||
Sbjct 4438 GCAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAGGATGGACGGACCCTTTCGGACTACAA 4379
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||| || ||||| |||||||||| ||||||||||
Sbjct 4378 CATTCAGAAGGAGTCGACGCTGCACCTGGTGCTGCG 4343
Score = 129 bits (142), Expect = 6e-25
Identities = 162/217 (75%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || |||||||| ||||| |||||||| || |||||| | || || ||| | |
Sbjct 4329 ATGCAGATTTTCGTAAAGACGCTTACGGGCAAGACGATCACCCTGGAGGTGGAGTCGTCG 4270
Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361
|||| | || || | | || ||||||| ||||| ||||| || |||||| ||||
Sbjct 4269 GACACGATTGACAATG-TGAAGTCTAAAATCCAGGACAAGGAGGGCAT-CCCGCCAGACC 4212
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| ||||| || || | ||| ||||| ||| |||| || | ||||| || |||||||
Sbjct 4211 AGCAGCGCCTTATCTTCGCTGGCAAGCAGTTGGAGGATGGCCGCACGCTATCGGACTACA 4152
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||||||| |||||| |||| || || ||||||||||
Sbjct 4151 ACATCCAGAAGGAATCGACTCTTCACCTGGTGCTGCG 4115
Score = 125 bits (138), Expect = 7e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| ||||| ||||||||| |||| |||||| | |
Sbjct 4785 ATGCAGATTTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTCGAGTCTTCT 4726
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | | | |||| | || || || | ||||| ||||| || ||| | || ||
Sbjct 4725 GATACCATCGACAACG-TCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCGGATCA 4667
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| || |||| || || || ||||| || |||| ||||| ||| ||| |||||
Sbjct 4666 GCAGCGTCTGATTTTTGCCGGAAAGCAGCTCGAGGACGGCCGCACGCTCTCCGATTACAA 4607
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||| ||||| | || |||||| | || |||||| || | |||||
Sbjct 4606 CATCCAGAAGGAGTCCACCCTGCATCTCGTCCTGCGTCTGCGTGGCGG 4559
>seq1920
Length=25525
Score = 102 bits (112), Expect = 8e-17
Identities = 156/217 (72%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| ||||| |||||||| || || || ||| | || |||||| || |
Sbjct 16945 ATGCAGATCTTCGTGAAAACCCTCACGGGTAAGACAATTACCCTTGAGGTCGAGAGCAGC 16886
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACCA 38362
|||| | | | | || || |||| ||||| ||||| || |||||| |||||
Sbjct 16885 GACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCAT-CCCGCCTGACCA 16827
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| | || | ||| ||||| ||||| || || | || || ||| ||| |||||
Sbjct 16826 GCAGCGCTTGATCTTCGCCGGCAAGCAGCTAGAAGATGGACGGACTCTCTCCGATTACAA 16767
Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCG 38458
|||||| ||||| ||| || || || ||||||| ||
Sbjct 16766 CATCCAGAAGGAGAGC-ACTCTCCACCTGGTGCTACG 16731
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500156000446080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |