Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12- 22] 2,687 sequences; 28,556,450 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq2072 230 3e-55 seq18 104 3e-17 >seq2072 Length=20114 Score = 230 bits (254), Expect = 3e-55 Identities = 430/629 (68%), Gaps = 12/629 (2%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||||| ||| || || || ||||| | ||||| || |||||||| Sbjct 11128 TCGAAGTCCTCACCACCCAGGTGAGTGTCACCAGCGGTAGACTTGACCTCGAAGATACCC 11069 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | |||||| | | || || ||||| || |||||||||||||| || || || || ||| Sbjct 11068 TCCTCAATGGTGAGCAGAGACACATCGAAAGTACCACCACCCAGATCGAAGATCAGCACG 11009 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | || ||||| || |||||||| || || || || || || || || Sbjct 11008 TTGCGCTCGCCCTCGACCTTCTTGTCAAGACCGTAGGCAATGGCAGCAGCAGTAGGCTCG 10949 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 ||||| ||||| || ||| ||||| || || | ||||| ||||| || || || Sbjct 10948 TTAATGATACGCAGGACGTTGAGGCCGGCGATCAGACCAGCATCCTTCGTAGCCTGGCGC 10889 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || || ||||| |||||||| ||||| || | ||| || | | || | ||| || Sbjct 10888 TGGGAGTCGTTGAAGTAGGCGGGGACAGTGATGACAGCATTGTTAACGGTGCCACCAAGG 10829 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || || || ||| | || ||| ||||| || ||||| || |||||||| |||| | Sbjct 10828 TAAGACTCGGCGGTCTCACGCATCTTGGTGAGGACCATGGAGGAAATCTCCTCAGGAGTG 10769 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGG 7876 ||||| ||| | || || || || || || || || ||||| || || |||| | Sbjct 10768 AACTGCTTCTTCTCGCCCTTGAACTCGACCTCGATGATGGGCTT----GC--CACCCTTG 10715 Query 7877 ATAACCTTA---TACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTT 7933 ||| || | | | | ||||| ||| | ||||||| || | || Sbjct 10714 TCAACGATAGTGAAAGGGAAGTGCTTCATGTCGGCCTGGACCTCGGCATCGGCGAAACGA 10655 Query 7934 CTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTC 7993 | || || || |||||||| || || || ||||| | |||||||||||| |||||| Sbjct 10654 CGGCCAATGAGCCGCTTTGCGTCGAAGACGGTGTTCTGGGGGTTCATGGCGACCTGGTTC 10595 Query 7994 TTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTC 8053 || || || || ||||| | || || | | ||||| || || ||| | || || || Sbjct 10594 TTGGCAGCATCACCGATCAACCGCTC---AGTGTCCGTGAAGGCCACGAAAGACGGTGTG 10538 Query 8054 GTTCGATTCCCTTGGTCGTTCGCAATAAT 8082 || || || || ||||| || |||||||| Sbjct 10537 GTGCGGTTACCCTGGTCATTTGCAATAAT 10509 >seq18 Length=8942 Score = 104 bits (114), Expect = 3e-17 Identities = 185/267 (69%), Gaps = 11/267 (4%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| |||||||| | || || || || || ||||| || || || | || Sbjct 8244 TCGAAATCCTCACCACCAAGATGGGTGTCACCGGCAGTCGCAAGAACCTCGAAAACGCCC 8185 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAA---AATGAGT 7573 || ||| || | || |||||||| ||||||||||| ||||| | ||||| Sbjct 8184 TGATCGATGGATAGAAGAGACACATCAAAAGTACCACCACCAAGGTCGTACACAATGA-- 8127 Query 7574 ACGTTCGTATCG-TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632 || | || ||| | | | |||| || ||||| || ||||| || ||||| || || Sbjct 8126 ----TC-TGGCGCTCGCCATCGGTCTTGTCAAGACCATAGGCGATCGCAGCCGCGGTGGG 8072 Query 7633 TTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTG 7692 || || | |||||| ||| ||||||||||||||| || | ||||| || || || || Sbjct 8071 CTCGTTGACAATACGCAGAACGTTCAGGCCAGCAATGGTGCCGGCATCCTTGGTAGCCTG 8012 Query 7693 TCGTTGCGAATCGTTAAAGTAGGCCGG 7719 || || ||||| |||||||| || Sbjct 8011 GCGCTGGTTGTCGTTGAAGTAGGCAGG 7985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635111467477080