Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12- 22] 2,687 sequences; 28,556,450 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq2494 210 3e-49 seq2400 98.7 1e-15 seq2561 82.4 9e-11 >seq2494 Length=11727 Score = 210 bits (232), Expect = 3e-49 Identities = 1103/1732 (64%), Gaps = 63/1732 (4%) Strand=Plus/Minus Query 109500 GTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGT---CGATGAT 109556 ||| | |||||| ||||| |||||||| ||||| || |||||||| | | || | Sbjct 3295 GTTGAGCGACTGCGACTGGTCGATGAACGCGCCACGGTCGGCCGCCATCTGCACAATCGT 3236 Query 109557 ACACTTTTGGCTA-ATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGT 109615 | || || | || ||||| || |||||||||| | |||||| || | || |||| Sbjct 3235 GCGCT----GCGAGATCTCCCAAACGGTCTTGTACAGAGCCTTGATGTCGGCCGGGATGT 3180 Query 109616 CCACGATGTTTTGAATAGAGCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACC 109675 |||||| || || || || || | | ||| | | |||||| | | ||||| Sbjct 3179 TGGGGATGTTCTGGATCGAACCGCCCTCGGCAATGATGCGGTTCTTCATGTTGTCCGACC 3120 Query 109676 AGAGACCGACCTTTTTGAGATCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAG 109735 | || || | | |||||| | | || | |||||| || ||| || || | Sbjct 3119 ACAGCCCCATATCAACGAGATCCTTCAGCAGCCACGGGTTGACAACCTGAAACTCGCCCG 3060 Query 109736 CAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTA 109795 | || || || ||||||||| | |||||| || ||||| || || |||||||| | Sbjct 3059 CCAGCACACGGCGCGAGTAGATGTTGGACGTGTACGGCTCGAAGCATTCGTTGTTGCCCA 3000 Query 109796 GGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCT 109855 |||| || | || || ||||| |||||||| |||| | |||||||| |||| || | Sbjct 2999 GGATCTGCGACGTCGACGCTGTTGGCATGGGGGCCACCAACAGACTGTTGCGGACGCCGT 2940 Query 109856 TCGTCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTC---- 109911 | ||| | | | ||| | | |||||| || |||| | | || | Sbjct 2939 GCTCCTTGATCTTCAGACGGAGCGAGTCCCAGTC-------CCAC--AGGTCAGACGGCT 2889 Query 109912 TCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTC 109971 |||| |||||||| || || || || | |||| || ||||||| |||| | || Sbjct 2888 TCACG-TCCCACATGTCGGGCTGCAGAATTCCCTGAGACACAGGAGAGCCCTCATACGTC 2830 Query 109972 TCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATA 110031 | || | ||||||| || ||||| ||| | || || || || || || || || Sbjct 2829 GCATAGGTGCCCTCAATCTGGGCCAGGTCGCACGACGCAGTGAGAGCGGCGTGGTAGATG 2770 Query 110032 GTCTCAAAAATATGAGCATTCATGAGG---CGAGACTCTTCACAGTCGAAGGGAAGACCA 110088 |||||||| || || || |||| || | ||| | || ||||| | | Sbjct 2769 GTCTCAAAGATTTGC---TTGTTGAGCTCCCGTGCCTCGGGCGACTCAAAGGGCATGCG- 2714 Query 110089 CAAAGA-ATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCAT 110147 || | | || |||| || || ||||| ||||| | |||||| || || || ||| Sbjct 2713 CAGCGCCAGGAAAGCATCTGCCAGCCCCTGCACACCCAAACCAATAGGACGGTGGCGCAT 2654 Query 110148 GTTAGAGCG-TCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGAT 110206 ||| | ||| | | |||||||| ||||| || |||| || || || | Sbjct 2653 GTTGCTGTTCTCGGCCTCCGGC-ACGGGGTAGTAGTTGACATCAATGATGCGGTTCAGGT 2595 Query 110207 TCTTCGTCA--CAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTC 110264 | | || ||| || | | || ||||| || | | | ||| |||| | | | Sbjct 2594 TGCG-GACAAGCAG-CTGTGCAACCTCGTGGAGCTTCTTGAAGTCGTACGTCTCGTTGTT 2537 Query 110265 CTTATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTT 110324 | | ||| | || || || | || || || |||||||||| | ||| || Sbjct 2536 GTAGTCAACAAAAGACGGCAGTGCTAGGGAAGCTAGGTTGCACACAGCAACCTCATCCGG 2477 Query 110325 GTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTT 110384 | |||| |||| ||| ||||| ||||||||||| || ||| || | |||||| Sbjct 2476 TGCACTGTACTCCACAATCTCCGTGCACAAGTTGGAGCTGCGGATGGTGCCTAGGTTCTT 2417 Query 110385 CTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGT 110444 ||| || ||| ||| || ||||| ||||||||| | || | || || ||||| Sbjct 2416 CTGGTTGCTCTTGCGGTTACAGTGGTCCTTGTAGAGCATGAACGGATTGCCCGTCTCCGT 2357 Query 110445 CTGTGACTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGTT--GCGTTAGCGA- 110500 ||| | || ||||| || | ||| | | || | ||| ||| || ||| || | Sbjct 2356 CTGAGCCTCGAGAACTGCGTACCAGAGCTTCTG-GGCCTTGACCTTTTTGCG---GCCAC 2301 Query 110501 GACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAA 110560 ||||||| ||||||||| |||| | ||||||| || | ||||| || || | | Sbjct 2300 GACCTTCGCGCTCGTACTTCTCATACAGGGCCTCAAACTCGTCGCCGTAGACGTCCGCCA 2241 Query 110561 GACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCA 110620 |||| || || ||| || | || | ||| | || || |||||||| ||||| Sbjct 2240 GACCGGGACACTCGTTGGGGCACATCAGCGTCCACTCGCCGTTCTTCTCAACCCGCTTCA 2181 Query 110621 TGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCAC 110680 ||||||| ||||| ||||| | |||| ||| || || || |||| ||| || | | Sbjct 2180 TGAACAGATCAGGGATCCAGAGCGCCAGGAACAGATCGCGAGCACGAATCTCCTCCTTGC 2121 Query 110681 CTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGA 110740 | ||||| ||| || || | || || | || ||| | ||||| || || || |||| Sbjct 2120 CATGGTTTTTGCGCAGGTCAAGGAACTCAAAGACATCAGCATGCCAAGGCTCTAGGTAGA 2061 Query 110741 CAGCGATGGATCCCTTACG---ACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGA 110797 || | ||| || || |||||| |||||||| || ||| ||| Sbjct 2060 TGCAGAAAGCGCCCGGGCGCTTGTTTCCGCCCTGGTCCACATAGCGAGCCGTGTTGTTGT 2001 Query 110798 AGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACT 110857 |||| | ||||||||| || || |||| ||| || ||||| || ||| ||| Sbjct 2000 AGACACGGAGCATAGGGATGATGCCATTGGACGTGCCGTTTGTGCCGGCAATGTAGGAGC 1941 Query 110858 TATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTG 110917 | || || || ||||| | | ||||| ||||| ||| ||| || | Sbjct 1940 CGGTAGCCCGGATACGGTGGACGTTGAGGCCAATGCCACCAGCCGTCTTGGAGATCATGG 1881 Query 110918 CACA-CTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGA 110976 |||| ||| |||| || |||| ||||| ||||| || |||| || | | || Sbjct 1880 CACAGGTCT-TGAGGGTGTCATAGATACCCTCAATGCTGTCATCCTTTATGTCCACAAGG 1822 Query 110977 AAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGA 111036 ||||| || ||||| || | | || || || || ||||||||||| || | ||||| Sbjct 1821 AAGCAGGATGACATTTGGGCCTGTGGTGTGCCGGCGTTGAAGAGTGTCGGCGAGGCATGC 1762 Query 111037 ATGAACAGACCTTG--GGACATCTTGTTGTATGTGTCGAGTGCGGAGGGT--ACATCTTT 111092 ||| ||| ||| ||||| | ||||||||| || | | | | | |||| | Sbjct 1761 GTGA--AGAATTTGTTCGACATGTAGTTGTATGTCTCAA--CCACACGCTCCACATTATC 1706 Query 111093 ACCGTGAATACCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCC 111152 ||| || |||| || || ||||| | ||| | || ||| |||| | ||| || Sbjct 1705 ACCCCAGATGCCAACTGCCACGCGCATAATCATGTGCTGCGGCCGCTCGACAATCTTGCC 1646 Query 111153 ATCAACACGCT---GAAGGTAACTCTTCTCTAGGGTCTTGAGACCAAAGTAT 111201 ||| | ||| | |||||| | ||| || ||||||| |||||| ||| Sbjct 1645 ATCGA---GCTTGAGTAGGTAAGACCGCTCCAGTGTCTTGAAACCAAAATAT 1597 >seq2400 Length=47555 Score = 98.7 bits (108), Expect = 1e-15 Identities = 139/192 (72%), Gaps = 5/192 (3%) Strand=Plus/Minus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 || || || || || ||||| || ||||| || |||| || |||||||| || || Sbjct 7634 TGCAGGCCCTCGTCACGAGAAATAAGCTCGTTGGAGAAGGTCAGGCCAGGCATCAGGCCG 7575 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627 | ||||| ||||| ||||||| | | || || |||||||||||||||||| | Sbjct 7574 CGCTTCTTCAGCCAGAAGATGGAAGAGAAGGCACCGCTGAAGAAGATGCCCTCCACAGCG 7515 Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAGAC-TTGTC---GAACCACTTGAGAGC 119683 || ||||||| || |||| ||| |||||| || | ||| || |||||||||||| Sbjct 7514 GCAAAAGCGACCAGGCGCTGAGC-AAAGGTGGACTCGCGGTCTGAGATCCACTTGAGAGC 7456 Query 119684 CCAGTTGGCCTT 119695 ||| | |||||| Sbjct 7455 CCAATCGGCCTT 7444 >seq2561 Length=10669 Score = 82.4 bits (90), Expect = 9e-11 Identities = 186/277 (67%), Gaps = 2/277 (1%) Strand=Plus/Minus Query 11677 CCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCG 11736 |||| || || ||||| |||||||| ||||| || || ||| || || || Sbjct 8555 CCGATGGCATCGATCTCGTCGATGAAGACGATGCAGGGCGCGTTCTTGCGGGCGGTGGCG 8496 Query 11737 AAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGC- 11795 || || || || || ||| || || || || ||||||||||| || || | | | | Sbjct 8495 AAGAGATCGCGCACGCGCGAGGCGCCGACGCCGACGAACATCTCGACAAACTCGGAGCCG 8436 Query 11796 AGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTT 11855 || ||||| |||||| || ||||| || ||| |||| || || || ||||| Sbjct 8435 CTCACGCTGAA-GAAGGGCACGCCCGACTCGCCGGCGGTGGCCTTGGCCAGCAGCGTCTT 8377 Query 11856 ACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACTTCCAAA 11915 || || || || | || || || | |||||| || || |||||||| || | Sbjct 8376 GCCGGTGCCGGGCGGCCCGGCCAGGATGGCGCCGCGCGGAATCTTGGCGCCCAGCCGCTG 8317 Query 11916 GTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCC 11952 | ||||||| |||| ||| |||||| ||||| |||| Sbjct 8316 GAAGCGCTCCGGCTGCTTCAGGAAGCTCACAAACTCC 8280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588956217768600