Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12-
22] 2,687 sequences; 28,556,450 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq2494 210 3e-49
seq2400 98.7 1e-15
seq2561 82.4 9e-11
>seq2494
Length=11727
Score = 210 bits (232), Expect = 3e-49
Identities = 1103/1732 (64%), Gaps = 63/1732 (4%)
Strand=Plus/Minus
Query 109500 GTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGT---CGATGAT 109556
||| | |||||| ||||| |||||||| ||||| || |||||||| | | || |
Sbjct 3295 GTTGAGCGACTGCGACTGGTCGATGAACGCGCCACGGTCGGCCGCCATCTGCACAATCGT 3236
Query 109557 ACACTTTTGGCTA-ATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGT 109615
| || || | || ||||| || |||||||||| | |||||| || | || ||||
Sbjct 3235 GCGCT----GCGAGATCTCCCAAACGGTCTTGTACAGAGCCTTGATGTCGGCCGGGATGT 3180
Query 109616 CCACGATGTTTTGAATAGAGCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACC 109675
|||||| || || || || || | | ||| | | |||||| | | |||||
Sbjct 3179 TGGGGATGTTCTGGATCGAACCGCCCTCGGCAATGATGCGGTTCTTCATGTTGTCCGACC 3120
Query 109676 AGAGACCGACCTTTTTGAGATCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAG 109735
| || || | | |||||| | | || | |||||| || ||| || || |
Sbjct 3119 ACAGCCCCATATCAACGAGATCCTTCAGCAGCCACGGGTTGACAACCTGAAACTCGCCCG 3060
Query 109736 CAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTA 109795
| || || || ||||||||| | |||||| || ||||| || || |||||||| |
Sbjct 3059 CCAGCACACGGCGCGAGTAGATGTTGGACGTGTACGGCTCGAAGCATTCGTTGTTGCCCA 3000
Query 109796 GGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCT 109855
|||| || | || || ||||| |||||||| |||| | |||||||| |||| || |
Sbjct 2999 GGATCTGCGACGTCGACGCTGTTGGCATGGGGGCCACCAACAGACTGTTGCGGACGCCGT 2940
Query 109856 TCGTCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTC---- 109911
| ||| | | | ||| | | |||||| || |||| | | || |
Sbjct 2939 GCTCCTTGATCTTCAGACGGAGCGAGTCCCAGTC-------CCAC--AGGTCAGACGGCT 2889
Query 109912 TCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTC 109971
|||| |||||||| || || || || | |||| || ||||||| |||| | ||
Sbjct 2888 TCACG-TCCCACATGTCGGGCTGCAGAATTCCCTGAGACACAGGAGAGCCCTCATACGTC 2830
Query 109972 TCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATA 110031
| || | ||||||| || ||||| ||| | || || || || || || || ||
Sbjct 2829 GCATAGGTGCCCTCAATCTGGGCCAGGTCGCACGACGCAGTGAGAGCGGCGTGGTAGATG 2770
Query 110032 GTCTCAAAAATATGAGCATTCATGAGG---CGAGACTCTTCACAGTCGAAGGGAAGACCA 110088
|||||||| || || || |||| || | ||| | || ||||| | |
Sbjct 2769 GTCTCAAAGATTTGC---TTGTTGAGCTCCCGTGCCTCGGGCGACTCAAAGGGCATGCG- 2714
Query 110089 CAAAGA-ATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCAT 110147
|| | | || |||| || || ||||| ||||| | |||||| || || || |||
Sbjct 2713 CAGCGCCAGGAAAGCATCTGCCAGCCCCTGCACACCCAAACCAATAGGACGGTGGCGCAT 2654
Query 110148 GTTAGAGCG-TCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGAT 110206
||| | ||| | | |||||||| ||||| || |||| || || || |
Sbjct 2653 GTTGCTGTTCTCGGCCTCCGGC-ACGGGGTAGTAGTTGACATCAATGATGCGGTTCAGGT 2595
Query 110207 TCTTCGTCA--CAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTC 110264
| | || ||| || | | || ||||| || | | | ||| |||| | | |
Sbjct 2594 TGCG-GACAAGCAG-CTGTGCAACCTCGTGGAGCTTCTTGAAGTCGTACGTCTCGTTGTT 2537
Query 110265 CTTATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTT 110324
| | ||| | || || || | || || || |||||||||| | ||| ||
Sbjct 2536 GTAGTCAACAAAAGACGGCAGTGCTAGGGAAGCTAGGTTGCACACAGCAACCTCATCCGG 2477
Query 110325 GTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTT 110384
| |||| |||| ||| ||||| ||||||||||| || ||| || | ||||||
Sbjct 2476 TGCACTGTACTCCACAATCTCCGTGCACAAGTTGGAGCTGCGGATGGTGCCTAGGTTCTT 2417
Query 110385 CTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGT 110444
||| || ||| ||| || ||||| ||||||||| | || | || || |||||
Sbjct 2416 CTGGTTGCTCTTGCGGTTACAGTGGTCCTTGTAGAGCATGAACGGATTGCCCGTCTCCGT 2357
Query 110445 CTGTGACTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGTT--GCGTTAGCGA- 110500
||| | || ||||| || | ||| | | || | ||| ||| || ||| || |
Sbjct 2356 CTGAGCCTCGAGAACTGCGTACCAGAGCTTCTG-GGCCTTGACCTTTTTGCG---GCCAC 2301
Query 110501 GACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAA 110560
||||||| ||||||||| |||| | ||||||| || | ||||| || || | |
Sbjct 2300 GACCTTCGCGCTCGTACTTCTCATACAGGGCCTCAAACTCGTCGCCGTAGACGTCCGCCA 2241
Query 110561 GACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCA 110620
|||| || || ||| || | || | ||| | || || |||||||| |||||
Sbjct 2240 GACCGGGACACTCGTTGGGGCACATCAGCGTCCACTCGCCGTTCTTCTCAACCCGCTTCA 2181
Query 110621 TGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCAC 110680
||||||| ||||| ||||| | |||| ||| || || || |||| ||| || | |
Sbjct 2180 TGAACAGATCAGGGATCCAGAGCGCCAGGAACAGATCGCGAGCACGAATCTCCTCCTTGC 2121
Query 110681 CTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGA 110740
| ||||| ||| || || | || || | || ||| | ||||| || || || ||||
Sbjct 2120 CATGGTTTTTGCGCAGGTCAAGGAACTCAAAGACATCAGCATGCCAAGGCTCTAGGTAGA 2061
Query 110741 CAGCGATGGATCCCTTACG---ACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGA 110797
|| | ||| || || |||||| |||||||| || ||| |||
Sbjct 2060 TGCAGAAAGCGCCCGGGCGCTTGTTTCCGCCCTGGTCCACATAGCGAGCCGTGTTGTTGT 2001
Query 110798 AGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACT 110857
|||| | ||||||||| || || |||| ||| || ||||| || ||| |||
Sbjct 2000 AGACACGGAGCATAGGGATGATGCCATTGGACGTGCCGTTTGTGCCGGCAATGTAGGAGC 1941
Query 110858 TATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTG 110917
| || || || ||||| | | ||||| ||||| ||| ||| || |
Sbjct 1940 CGGTAGCCCGGATACGGTGGACGTTGAGGCCAATGCCACCAGCCGTCTTGGAGATCATGG 1881
Query 110918 CACA-CTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGA 110976
|||| ||| |||| || |||| ||||| ||||| || |||| || | | ||
Sbjct 1880 CACAGGTCT-TGAGGGTGTCATAGATACCCTCAATGCTGTCATCCTTTATGTCCACAAGG 1822
Query 110977 AAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGA 111036
||||| || ||||| || | | || || || || ||||||||||| || | |||||
Sbjct 1821 AAGCAGGATGACATTTGGGCCTGTGGTGTGCCGGCGTTGAAGAGTGTCGGCGAGGCATGC 1762
Query 111037 ATGAACAGACCTTG--GGACATCTTGTTGTATGTGTCGAGTGCGGAGGGT--ACATCTTT 111092
||| ||| ||| ||||| | ||||||||| || | | | | | |||| |
Sbjct 1761 GTGA--AGAATTTGTTCGACATGTAGTTGTATGTCTCAA--CCACACGCTCCACATTATC 1706
Query 111093 ACCGTGAATACCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCC 111152
||| || |||| || || ||||| | ||| | || ||| |||| | ||| ||
Sbjct 1705 ACCCCAGATGCCAACTGCCACGCGCATAATCATGTGCTGCGGCCGCTCGACAATCTTGCC 1646
Query 111153 ATCAACACGCT---GAAGGTAACTCTTCTCTAGGGTCTTGAGACCAAAGTAT 111201
||| | ||| | |||||| | ||| || ||||||| |||||| |||
Sbjct 1645 ATCGA---GCTTGAGTAGGTAAGACCGCTCCAGTGTCTTGAAACCAAAATAT 1597
>seq2400
Length=47555
Score = 98.7 bits (108), Expect = 1e-15
Identities = 139/192 (72%), Gaps = 5/192 (3%)
Strand=Plus/Minus
Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567
|| || || || || ||||| || ||||| || |||| || |||||||| || ||
Sbjct 7634 TGCAGGCCCTCGTCACGAGAAATAAGCTCGTTGGAGAAGGTCAGGCCAGGCATCAGGCCG 7575
Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627
| ||||| ||||| ||||||| | | || || |||||||||||||||||| |
Sbjct 7574 CGCTTCTTCAGCCAGAAGATGGAAGAGAAGGCACCGCTGAAGAAGATGCCCTCCACAGCG 7515
Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAGAC-TTGTC---GAACCACTTGAGAGC 119683
|| ||||||| || |||| ||| |||||| || | ||| || ||||||||||||
Sbjct 7514 GCAAAAGCGACCAGGCGCTGAGC-AAAGGTGGACTCGCGGTCTGAGATCCACTTGAGAGC 7456
Query 119684 CCAGTTGGCCTT 119695
||| | ||||||
Sbjct 7455 CCAATCGGCCTT 7444
>seq2561
Length=10669
Score = 82.4 bits (90), Expect = 9e-11
Identities = 186/277 (67%), Gaps = 2/277 (1%)
Strand=Plus/Minus
Query 11677 CCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCG 11736
|||| || || ||||| |||||||| ||||| || || ||| || || ||
Sbjct 8555 CCGATGGCATCGATCTCGTCGATGAAGACGATGCAGGGCGCGTTCTTGCGGGCGGTGGCG 8496
Query 11737 AAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGC- 11795
|| || || || || ||| || || || || ||||||||||| || || | | | |
Sbjct 8495 AAGAGATCGCGCACGCGCGAGGCGCCGACGCCGACGAACATCTCGACAAACTCGGAGCCG 8436
Query 11796 AGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTT 11855
|| ||||| |||||| || ||||| || ||| |||| || || || |||||
Sbjct 8435 CTCACGCTGAA-GAAGGGCACGCCCGACTCGCCGGCGGTGGCCTTGGCCAGCAGCGTCTT 8377
Query 11856 ACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACTTCCAAA 11915
|| || || || | || || || | |||||| || || |||||||| || |
Sbjct 8376 GCCGGTGCCGGGCGGCCCGGCCAGGATGGCGCCGCGCGGAATCTTGGCGCCCAGCCGCTG 8317
Query 11916 GTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCC 11952
| ||||||| |||| ||| |||||| ||||| ||||
Sbjct 8316 GAAGCGCTCCGGCTGCTTCAGGAAGCTCACAAACTCC 8280
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588956217768600
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