Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12-
22] 2,687 sequences; 28,556,450 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq2494 241 2e-58
seq2561 95.1 1e-14
>seq2494
Length=11727
Score = 241 bits (266), Expect = 2e-58
Identities = 1060/1658 (64%), Gaps = 61/1658 (4%)
Strand=Plus/Minus
Query 105751 GATTTCCCACACTGTGCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTG 105810
||| ||||| || || ||| ||| |||||| || | ||||| | | ||| || ||
Sbjct 3226 GATCTCCCAAACGGTCTTGTACAGAGCCTTGATGTCGGCCGGGATGTTGGGGATGTTCTG 3167
Query 105811 AATTGAACCCCCCGCCTTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTT 105870
|| ||||| ||| | | ||| | | |||||| | | ||||| || || || |
Sbjct 3166 GATCGAACCGCCCTCGGCAATGATGCGGTTCTTCATGTTGTCCGACCACAGCCCCATATC 3107
Query 105871 CTTGAGATCATTGACGAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCT 105930
|||||| || | || | |||||||| | |||||| ||||| || | |
Sbjct 3106 AACGAGATCCTTCAGCAGCCACGGGTTGACAACCTGAAACTCGCCCGCCAGCACACGGCG 3047
Query 105931 CAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGT 105990
| |||||||| | |||||| || || |||||||| || || |||| ||| || | ||
Sbjct 3046 CGAGTAGATGTTGGACGTGTACGGCTCGAAGCATTCGTTGTTGCCCAGGATCTGCGACGT 2987
Query 105991 GGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCG 106050
|| ||||||||||| || |||| ||| |||||||| || | || | ||||||||
Sbjct 2986 CGACGCTGTTGGCATGGGGGCCACCAACAGACTGTTGCGGACGCCGTGCTCCTTGATC-- 2929
Query 106051 TTCCTTGAGAACA--TCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATATCAA 106106
||| || | |||||||| | | | || || ||||| | ||||||| ||
Sbjct 2928 TTCAGACGGAGCGAGTCCCAGTCCCACAGGTCAGAC-GGCTTCACGT-CCCACATGTCGG 2871
Query 106107 ATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTT 106166
|| || | || || ||| ||||| |||||| | ||| |||||| || | |
Sbjct 2870 GCTGCAGAATTCCCTGAGACACAGGAGAGCCCTCATACGTCGCATAGGTGCCCTCAATCT 2811
Query 106167 CAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCAT 106226
|||| || || ||| || | ||||| || ||||| |||||||| | |
Sbjct 2810 GGGCCAGGTCGCACGACGCAGTGAGAGCGGCGTGGTAGATGGTCTCAAAGATTTGCTTGT 2751
Query 106227 TCATCTCCTTGGCTTCATCTGAATCAAA-----TGCGTAGCGGCACAAAATAAATACATC 106281
| | |||| || || || ||||| |||| |||| || ||| ||||
Sbjct 2750 TGAGCTCCCGTGCCTCGGGCGACTCAAAGGGCATGCGCAGCGCCAGGAAAG-----CATC 2696
Query 106282 CGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGT 106341
|| || || || ||||||||||||||||| | ||| ||||| || | ||| || |
Sbjct 2695 TGCCAGCCCCTGCACACCCAAACCAATAGGACGGTGGCGCATGTT-GCTGTTCTCG--GC 2639
Query 106342 CTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTT 106398
||| ||||| || | || ||||||| ||||| || || | || | ||
Sbjct 2638 CTCCGGCACGGGGTAGTAGTTGACATCAATGATGCGGTTCAGGTTGCGGACAAGCAGCTG 2579
Query 106399 TGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTG------ACATA 106452
|| | || || || || | | || || || |||| | ||| ||| |
Sbjct 2578 TGCAACCTCGTGGAGCTTCTTGAAGTC----GTACG--TCTCGTTGTTGTAGTCAACAAA 2525
Query 106453 CTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTC 106512
|| || || | || || | ||||| ||||| ||||||| | |||||||
Sbjct 2524 AGACGGCAGTGCTAGGGAAGCTAGGTTGCACACAGCAACCTCATCCGGTGCACTGTACTC 2465
Query 106513 TAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTT 106572
| ||| || || ||||||||||| || || || || | ||||| ||||| |||||
Sbjct 2464 CACAATCTCCGTGCACAAGTTGGAGCTGCGGATGGTGCCTAGGTTCTTCTGGTTGCTCTT 2405
Query 106573 TTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAG 106632
||| || ||||||||||||||| | || | |||||||||||||| | || |||
Sbjct 2404 GCGGTTACAGTGGTCCTTGTAGAGCATGAACGGATTGCCCGTCTCCGTCTGAGCCTCGAG 2345
Query 106633 AATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGT 106691
|| ||| | ||| | | || | | || | || | | | | || || || |||||
Sbjct 2344 AACTGCGTACCAGAGCTTCTGGGCCTTG-ACCTTTTTGCGGCCACGACCTTCGCGCTCGT 2286
Query 106692 ACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGT 106751
|||| || ||||| |||||||| || || |||| | ||||| || || ||
Sbjct 2285 ACTTCTCATACAGGGCCTCAAACTCGTCGCCGTAGACGTCCGCCAGACCGGGACACTCGT 2226
Query 106752 CTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAA 106811
|| || | || | ||| | || || |||||||||||||||||| || || || |
Sbjct 2225 TGGGGCACATCAGCGTCCACTCGCCGTTCTTCTCAACCCGCTTCATGAACAGATCAGGGA 2166
Query 106812 TCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTA 106871
|||| || | || ||||| | | ||| ||| || | || ||||| || |
Sbjct 2165 TCCAGAGCGCCAGGAACAGATCGCGAGCACGAATCTCCTCCTTGCCATGGTTTTTGCGCA 2106
Query 106872 ACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGC-GATAGATCCC 106930
||||||||||| | || ||| || ||||| ||||| || |||| ||| || || |||
Sbjct 2105 GGTCAAGGAACTCAAAGACATCAGCATGCCAAGGCTCTAGGTAGA-TGCAGAAAGCGCCC 2047
Query 106931 ---------TTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGA 106981
|||| ||||| || | |||||||| || ||| ||| | || ||
Sbjct 2046 GGGCGCTTGTTTC--CGCCC----TGGTCCACATAGCGAGCCGTGTTGTTGTAGACACGG 1993
Query 106982 AGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCT 107041
||||| || || || |||| || || ||||| || ||| || | ||
Sbjct 1992 AGCATAGGGATGATGCCATTGGACGTGCCGTTTGTGCCGGCAATGTAGGAGCCGGTAGCC 1933
Query 107042 CTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCC 107101
| | | |||| || | ||||| || |||||| ||| ||||| ||||| |
Sbjct 1932 CGGATACGGTGGACGTTGAGGCCAATGCCACCAGCCGTCTTGGAGATCATGGCACAGGTC 1873
Query 107102 GTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTG 107161
| || || |||||||||| | || ||| ||||| || | | |||||||||
Sbjct 1872 TTGAGGGTGTCATAGATACCCTCAATGCTGTCATCCTTTATGTCCACAAGGAAGCAGGAT 1813
Query 107162 GACATCTGCGGTCT-TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACAT 107220
||||| || || || |||||| || || |||||||| || || | || || |||| |
Sbjct 1812 GACATTTG-GGCCTGTGGTGTGCCGGCGTTGAAGAGTGTCGGCGAGGCATGCGTGAAGAA 1754
Query 107221 ACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCC 107280
| ||||| | || ||||||||| | ||| || | | || || ||||||
Sbjct 1753 TTTGTTCGACATGTAGTTGTATGTCTCAACCACACGCTCCACATTATCACCCCAGATGCC 1694
Query 107281 GATGGCCACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTG 107340
| ||||| ||||||| ||||| || || || | | ||||||||||| |||
Sbjct 1693 AACTGCCACGCGCATAATCATGTGCTGCGGCCGCTCGACAATCTTGCCATCGAGC--TTG 1636
Query 107341 A--AGATAGCTCTTCTCAAGGGTTTTGAGACCAAAGTA 107376
| || || | ||| || || |||| |||||| ||
Sbjct 1635 AGTAGGTAAGACCGCTCCAGTGTCTTGAAACCAAAATA 1598
>seq2561
Length=10669
Score = 95.1 bits (104), Expect = 1e-14
Identities = 158/226 (70%), Gaps = 2/226 (1%)
Strand=Plus/Minus
Query 9371 GGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAG 9430
|||||| ||||| || |||||||| || || || || | ||||||| | | |||||
Sbjct 8550 GGCATCGATCTCGTCGATGAAGACGATGCAGGGCGCGTTCTTGCGGGCGGTGGCGAAGAG 8491
Query 9431 ATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG-GAAC 9489
|||||| || | |||||| || || || |||||||| ||||| | | | || ||
Sbjct 8490 ATCGCGCACGCGCGAGGCGCCGACGCCGACGAACATCTCGACAAACTCGGAGCCGCTCAC 8431
Query 9490 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 9549
| || |||||| || || || || || |||| ||| || || ||||| || |
Sbjct 8430 GCT-GAAGAAGGGCACGCCCGACTCGCCGGCGGTGGCCTTGGCCAGCAGCGTCTTGCCGG 8372
Query 9550 TACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC 9595
| || ||| || || |||| ||| || || ||||||||||||||
Sbjct 8371 TGCCGGGCGGCCCGGCCAGGATGGCGCCGCGCGGAATCTTGGCGCC 8326
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589960984019880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |