Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12- 22] 2,687 sequences; 28,556,450 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq2494 241 2e-58 seq2561 95.1 1e-14 >seq2494 Length=11727 Score = 241 bits (266), Expect = 2e-58 Identities = 1060/1658 (64%), Gaps = 61/1658 (4%) Strand=Plus/Minus Query 105751 GATTTCCCACACTGTGCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTG 105810 ||| ||||| || || ||| ||| |||||| || | ||||| | | ||| || || Sbjct 3226 GATCTCCCAAACGGTCTTGTACAGAGCCTTGATGTCGGCCGGGATGTTGGGGATGTTCTG 3167 Query 105811 AATTGAACCCCCCGCCTTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTT 105870 || ||||| ||| | | ||| | | |||||| | | ||||| || || || | Sbjct 3166 GATCGAACCGCCCTCGGCAATGATGCGGTTCTTCATGTTGTCCGACCACAGCCCCATATC 3107 Query 105871 CTTGAGATCATTGACGAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCT 105930 |||||| || | || | |||||||| | |||||| ||||| || | | Sbjct 3106 AACGAGATCCTTCAGCAGCCACGGGTTGACAACCTGAAACTCGCCCGCCAGCACACGGCG 3047 Query 105931 CAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGT 105990 | |||||||| | |||||| || || |||||||| || || |||| ||| || | || Sbjct 3046 CGAGTAGATGTTGGACGTGTACGGCTCGAAGCATTCGTTGTTGCCCAGGATCTGCGACGT 2987 Query 105991 GGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCG 106050 || ||||||||||| || |||| ||| |||||||| || | || | |||||||| Sbjct 2986 CGACGCTGTTGGCATGGGGGCCACCAACAGACTGTTGCGGACGCCGTGCTCCTTGATC-- 2929 Query 106051 TTCCTTGAGAACA--TCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATATCAA 106106 ||| || | |||||||| | | | || || ||||| | ||||||| || Sbjct 2928 TTCAGACGGAGCGAGTCCCAGTCCCACAGGTCAGAC-GGCTTCACGT-CCCACATGTCGG 2871 Query 106107 ATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTT 106166 || || | || || ||| ||||| |||||| | ||| |||||| || | | Sbjct 2870 GCTGCAGAATTCCCTGAGACACAGGAGAGCCCTCATACGTCGCATAGGTGCCCTCAATCT 2811 Query 106167 CAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCAT 106226 |||| || || ||| || | ||||| || ||||| |||||||| | | Sbjct 2810 GGGCCAGGTCGCACGACGCAGTGAGAGCGGCGTGGTAGATGGTCTCAAAGATTTGCTTGT 2751 Query 106227 TCATCTCCTTGGCTTCATCTGAATCAAA-----TGCGTAGCGGCACAAAATAAATACATC 106281 | | |||| || || || ||||| |||| |||| || ||| |||| Sbjct 2750 TGAGCTCCCGTGCCTCGGGCGACTCAAAGGGCATGCGCAGCGCCAGGAAAG-----CATC 2696 Query 106282 CGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGT 106341 || || || || ||||||||||||||||| | ||| ||||| || | ||| || | Sbjct 2695 TGCCAGCCCCTGCACACCCAAACCAATAGGACGGTGGCGCATGTT-GCTGTTCTCG--GC 2639 Query 106342 CTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTT 106398 ||| ||||| || | || ||||||| ||||| || || | || | || Sbjct 2638 CTCCGGCACGGGGTAGTAGTTGACATCAATGATGCGGTTCAGGTTGCGGACAAGCAGCTG 2579 Query 106399 TGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTG------ACATA 106452 || | || || || || | | || || || |||| | ||| ||| | Sbjct 2578 TGCAACCTCGTGGAGCTTCTTGAAGTC----GTACG--TCTCGTTGTTGTAGTCAACAAA 2525 Query 106453 CTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTC 106512 || || || | || || | ||||| ||||| ||||||| | ||||||| Sbjct 2524 AGACGGCAGTGCTAGGGAAGCTAGGTTGCACACAGCAACCTCATCCGGTGCACTGTACTC 2465 Query 106513 TAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTT 106572 | ||| || || ||||||||||| || || || || | ||||| ||||| ||||| Sbjct 2464 CACAATCTCCGTGCACAAGTTGGAGCTGCGGATGGTGCCTAGGTTCTTCTGGTTGCTCTT 2405 Query 106573 TTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAG 106632 ||| || ||||||||||||||| | || | |||||||||||||| | || ||| Sbjct 2404 GCGGTTACAGTGGTCCTTGTAGAGCATGAACGGATTGCCCGTCTCCGTCTGAGCCTCGAG 2345 Query 106633 AATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGT 106691 || ||| | ||| | | || | | || | || | | | | || || || ||||| Sbjct 2344 AACTGCGTACCAGAGCTTCTGGGCCTTG-ACCTTTTTGCGGCCACGACCTTCGCGCTCGT 2286 Query 106692 ACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGT 106751 |||| || ||||| |||||||| || || |||| | ||||| || || || Sbjct 2285 ACTTCTCATACAGGGCCTCAAACTCGTCGCCGTAGACGTCCGCCAGACCGGGACACTCGT 2226 Query 106752 CTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAA 106811 || || | || | ||| | || || |||||||||||||||||| || || || | Sbjct 2225 TGGGGCACATCAGCGTCCACTCGCCGTTCTTCTCAACCCGCTTCATGAACAGATCAGGGA 2166 Query 106812 TCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTA 106871 |||| || | || ||||| | | ||| ||| || | || ||||| || | Sbjct 2165 TCCAGAGCGCCAGGAACAGATCGCGAGCACGAATCTCCTCCTTGCCATGGTTTTTGCGCA 2106 Query 106872 ACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGC-GATAGATCCC 106930 ||||||||||| | || ||| || ||||| ||||| || |||| ||| || || ||| Sbjct 2105 GGTCAAGGAACTCAAAGACATCAGCATGCCAAGGCTCTAGGTAGA-TGCAGAAAGCGCCC 2047 Query 106931 ---------TTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGA 106981 |||| ||||| || | |||||||| || ||| ||| | || || Sbjct 2046 GGGCGCTTGTTTC--CGCCC----TGGTCCACATAGCGAGCCGTGTTGTTGTAGACACGG 1993 Query 106982 AGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCT 107041 ||||| || || || |||| || || ||||| || ||| || | || Sbjct 1992 AGCATAGGGATGATGCCATTGGACGTGCCGTTTGTGCCGGCAATGTAGGAGCCGGTAGCC 1933 Query 107042 CTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCC 107101 | | | |||| || | ||||| || |||||| ||| ||||| ||||| | Sbjct 1932 CGGATACGGTGGACGTTGAGGCCAATGCCACCAGCCGTCTTGGAGATCATGGCACAGGTC 1873 Query 107102 GTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTG 107161 | || || |||||||||| | || ||| ||||| || | | ||||||||| Sbjct 1872 TTGAGGGTGTCATAGATACCCTCAATGCTGTCATCCTTTATGTCCACAAGGAAGCAGGAT 1813 Query 107162 GACATCTGCGGTCT-TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACAT 107220 ||||| || || || |||||| || || |||||||| || || | || || |||| | Sbjct 1812 GACATTTG-GGCCTGTGGTGTGCCGGCGTTGAAGAGTGTCGGCGAGGCATGCGTGAAGAA 1754 Query 107221 ACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCC 107280 | ||||| | || ||||||||| | ||| || | | || || |||||| Sbjct 1753 TTTGTTCGACATGTAGTTGTATGTCTCAACCACACGCTCCACATTATCACCCCAGATGCC 1694 Query 107281 GATGGCCACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTG 107340 | ||||| ||||||| ||||| || || || | | ||||||||||| ||| Sbjct 1693 AACTGCCACGCGCATAATCATGTGCTGCGGCCGCTCGACAATCTTGCCATCGAGC--TTG 1636 Query 107341 A--AGATAGCTCTTCTCAAGGGTTTTGAGACCAAAGTA 107376 | || || | ||| || || |||| |||||| || Sbjct 1635 AGTAGGTAAGACCGCTCCAGTGTCTTGAAACCAAAATA 1598 >seq2561 Length=10669 Score = 95.1 bits (104), Expect = 1e-14 Identities = 158/226 (70%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 9371 GGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAG 9430 |||||| ||||| || |||||||| || || || || | ||||||| | | ||||| Sbjct 8550 GGCATCGATCTCGTCGATGAAGACGATGCAGGGCGCGTTCTTGCGGGCGGTGGCGAAGAG 8491 Query 9431 ATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG-GAAC 9489 |||||| || | |||||| || || || |||||||| ||||| | | | || || Sbjct 8490 ATCGCGCACGCGCGAGGCGCCGACGCCGACGAACATCTCGACAAACTCGGAGCCGCTCAC 8431 Query 9490 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 9549 | || |||||| || || || || || |||| ||| || || ||||| || | Sbjct 8430 GCT-GAAGAAGGGCACGCCCGACTCGCCGGCGGTGGCCTTGGCCAGCAGCGTCTTGCCGG 8372 Query 9550 TACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC 9595 | || ||| || || |||| ||| || || |||||||||||||| Sbjct 8371 TGCCGGGCGGCCCGGCCAGGATGGCGCCGCGCGGAATCTTGGCGCC 8326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589960984019880