Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12-
22] 2,687 sequences; 28,556,450 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq2379 138 3e-27
seq1979 109 1e-18
>seq2379
Length=13478
Score = 138 bits (152), Expect = 3e-27
Identities = 156/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||||||||| || || || || || ||||| || | || || | ||||| ||
Sbjct 4121 ACCAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAGTCCGATAGCGTGCGGCCATCCTCC 4180
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
| |||||| || ||||||||||| || || |||||||| || ||||| || ||||| ||
Sbjct 4181 AACTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGG 4240
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
||||| ||| || || ||||| |||||||| ||||| || ||||| | ||||||
Sbjct 4241 ATTTTAGACTTCACATTGTCAATCGTGTCCGACGACTCCACCTCCAGGGTGATCGTCTTG 4300
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | || |||||||| | |||||
Sbjct 4301 CCCGTAAGCGTCTTTACGAAAATCTGCAT 4329
Score = 120 bits (132), Expect = 7e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| || || ||||| || ||||| ||||| || | ||| || | ||||| ||
Sbjct 4349 ACCAGGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCCGAAAGGGTCCGTCCATCCTCA 4408
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || ||||| || || || || ||||| || || || || || ||||| ||
Sbjct 4409 AGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCGGGTGGGATACCCTCCTTGTCCTGG 4468
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||||||||| || ||||||||||| || || || || || | |||||
Sbjct 4469 ATCTTGGACTTGACGTTATCGATGGTGTCCGACGACTCGACCTCCAGAGTGATGGTCTTG 4528
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| |||| || || ||||| | |||||
Sbjct 4529 CCAGTCAGCGTCTTGACGAAGATCTGCAT 4557
Score = 120 bits (132), Expect = 7e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| || || || |||||||| || || || |||||||||| || || | || || |||
Sbjct 4577 ACGAGATGCAGGGTGGACTCCTTCTGGATGTTGTAATCGGAGAGCGTGCGGCCGTCCTCG 4636
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || || || || || || || || || || || ||||| || ||||| |||
Sbjct 4637 AGCTGCTTTCCGGCAAAAATCAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGA 4696
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||||||||| || ||||| || ||| || || || ||||| | |||||
Sbjct 4697 ATCTTGGACTTGACGTTGTCGATGGTATCAGAAGACTCGACCTCGAGGGTGATGGTCTTG 4756
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| | || || ||||| | |||||
Sbjct 4757 CCTGTGAGGGTCTTGACGAAAATCTGCAT 4785
>seq1979
Length=23555
Score = 109 bits (120), Expect = 1e-18
Identities = 144/200 (72%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| ||||| ||||| || || |||||||| || | || || | || || |||
Sbjct 2793 ACCAGGTGCAGAGTCGACTCCTTCTGGATATTGTAGTCAGACAGGGTACGGCCGTCCTCG 2852
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || || ||||| || || || ||||| || || ||||| || ||||| ||
Sbjct 2853 AGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGG 2912
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || |||||| || || || |||||||| || || || | ||| | |||||
Sbjct 2913 ATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTTG 2972
Query 195112 CCTGTCAAAGTTTTTACGAA 195131
|| || | || || |||||
Sbjct 2973 CCCGTAAGGGTCTTCACGAA 2992
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109443403668929
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |