Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12- 22] 2,687 sequences; 28,556,450 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq2379 104 2e-17 seq1920 98.7 6e-16 seq1979 82.4 5e-11 >seq2379 Length=13478 Score = 104 bits (114), Expect = 2e-17 Identities = 142/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||| |||||||||||| | ||| |||| || ||||| || || || || Sbjct 4367 TCCTTCTGAATGTTGTAGTCCGAAAGGGTCCGTCCATCCTCAAGCTGCTTGCCAGCGAAA 4426 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| ||||| ||||| Sbjct 4427 ATCAGGCGCTGCTGGTCGGGTGGGATACCCTCCTTGTCCTGGATCTTGGACTTGAC---- 4482 Query 34911 GCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||||| | ||| | ||| || || | || ||||| || || || || ||||| Sbjct 4483 GTTATCGATGGTGTCCGACGACTCGACCTCCAGAGTGATGGTCTTGCCAGTCAGCGTCTT 4542 Query 34967 CACAAAGATCTGCATA 34982 || |||||||||||| Sbjct 4543 GACGAAGATCTGCATA 4558 Score = 100 bits (110), Expect = 2e-16 Identities = 138/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||| || || |||||||| ||| | || | || |||||||| || || ||||| Sbjct 3910 TTCCTTCTGGATATTGTAGTCCGAGAGGGTGCGGCCGTCCTCCAGCTGCTTGCCCGCAAA 3969 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || || ||||||||| | || | ||||||||||| ||||||| || ||| Sbjct 3970 AATGAGCCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTCGACTTCACGTT 4029 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | |||| || | |||||| || | ||| || || || || || || ||||| || Sbjct 4030 GTCAATCGTATCTGATGACTCAACCTCCAAGGTAATCGTCTTCCCTGTCAGCGTCTTGAC 4089 Query 34970 AAAGATCTGCATA 34982 || ||||||||| Sbjct 4090 GAAAATCTGCATA 4102 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| || || || || | || | || || ||||| ||||||||||| Sbjct 4595 TCCTTCTGGATGTTGTAATCGGAGAGCGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAA 4654 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||| || | || | ||||||||||| |||||| |||||| Sbjct 4655 ATCAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTG 4714 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | ||| | ||| || |||| ||| ||||| || || ||||| ||||| || Sbjct 4715 TCGATGGTATCAGAAGACTCGACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTGACG 4774 Query 34971 AAGATCTGCAT 34981 || |||||||| Sbjct 4775 AAAATCTGCAT 4785 >seq1920 Length=25525 Score = 98.7 bits (108), Expect = 6e-16 Identities = 151/213 (71%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||||| || ||||| ||||| || || || || | ||| |||| || Sbjct 16737 ACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAATCGGAGAGAGTCCGTCCATCTTCT 16796 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || ||||| || || | || |||||||| |||| | ||||||||||| Sbjct 16797 AGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGG 16856 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGT 34948 ||||| ||||| || | ||||| || | | ||| || || | ||| || || Sbjct 16857 ATCTTGGACTTGAC--AT--TGTCGATAGTGTCGCTGCTCTCGACCTCAAGGGTAATTGT 16912 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || |||||||| || ||||| ||||||||||| Sbjct 16913 CTTACCCGTGAGGGTTTTCACGAAGATCTGCAT 16945 >seq1979 Length=23555 Score = 82.4 bits (90), Expect = 5e-11 Identities = 128/183 (70%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| || || ||||| || ||| | || | || || ||||| || || ||||| Sbjct 2811 TCCTTCTGGATATTGTAGTCAGACAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCAAAG 2870 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| |||| | ||||||||||| ||||| ||||| Sbjct 2871 ATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTG 2930 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || || ||| || || | ||| ||||| || ||||| || |||||||| Sbjct 2931 TCGATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTTGCCCGTAAGGGTCTTCACG 2990 Query 34971 AAG 34973 ||| Sbjct 2991 AAG 2993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324622968959736