Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20procerum_20[genbank_20GCA_5F000806385.1_202014-12- 22] 2,687 sequences; 28,556,450 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq2494 325 7e-84 seq2400 145 1e-29 >seq2494 Length=11727 Score = 325 bits (360), Expect = 7e-84 Identities = 1125/1736 (65%), Gaps = 54/1736 (3%) Strand=Plus/Minus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 ||||| ||||| | || | || || |||| ||||| || |||||||| || ||||| Sbjct 3423 ACCGTGAACTGGATGGGCTGGGCGGCTGCCTGCGTGCGCAGGTAGTACATTCCCGTCTTC 3364 Query 212613 AGGCCCTTGCCCCAGCCGTGCATGTGCATTGCTGTGAGTTTCTTCAGCTTAATATTCTGG 212672 |||||| ||||||| | |||||| ||||| |||| | || ||| Sbjct 3363 AGGCCCAGCTTCCAGCCGGTGAAGTGCATGCTTGTGA---TCTTGCCC-----ATGGTGG 3312 Query 212673 TCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTG 212732 | | | || || | ||| || ||||| |||||| ||||| | | | | | Sbjct 3311 GCTCACGCATG-------TGAATGTTGAGCGACTGCGACTGGTCGATGAACGCGCCACGG 3259 Query 212733 TCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCT 212792 || || ||||| | | || | ||| |||| |||||| ||||||||| | | | Sbjct 3258 TCGGCCGCCATCTGCACAATCGTGCGCTGCGAGATCTCCCAAACGGTCTTGTACAGAGCC 3199 Query 212793 TTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCC--CCTGTGTA-TGGTCAGC 212849 |||| ||| | |||| | |||||||||||| | || || ||| | | || | | Sbjct 3198 TTGATGTCGGCCGGGATGTTGGGGATGTTCTGGATCGAACCGCCCTCGGCAATGATGCGG 3139 Query 212850 TGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGG 212909 | | ||||| || ||| || ||| | | || ||| | ||| ||| Sbjct 3138 TTCTT---CATGTTGTCCGACCACAGCCCCATATCAACGAGATCCTTCAGCAGCCACGGG 3082 Query 212910 TTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGC 212969 ||||| | ||| || || || | ||||| | | | ||| | ||| || ||||| ||| Sbjct 3081 TTGACAACCTGAAACTCGCCCGCCAGCACACGGCGCGAGTAGATGTTGGACGTGTACGGC 3022 Query 212970 TCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACC 213029 |||| || |||||||| ||||| ||||| | || ||||| |||||||| |||||| Sbjct 3021 TCGAAGCATTCGTTGTTGCCCAGGATCTGCGACGTCGACGCTGTTGGCATGGGGGCCACC 2962 Query 213030 AGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCAT 213089 | |||||||| | || |||||||| ||| | || ||| |||||||||| Sbjct 2961 AACAGACTGTTGCGGACGCCGTGCTCCTTGATCTTCAGACGGAGCGAGTCCCAGTCCCAC 2902 Query 213090 CTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTC 213149 | ||||| | |||||||| ||||||||| ||||| || || | | Sbjct 2901 AGGTCAGACGG---------CTTCACGTCCCACATGTCGGGCTGCAGAATTCCCTGAGAC 2851 Query 213150 ACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCC 213209 || || ||||| || | | |||| ||| | || |||||| ||||| ||||| Sbjct 2850 ACAGGAGAGCCCTCATACGTCGCATAGGTGCCCTCAATCTGGGCCAGGTCGCACGACGCA 2791 Query 213210 TGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGG 213269 || || |||| ||||||||| ||||| || | | ||||||||| | ||||| || Sbjct 2790 GTGAGAGCGGCGTGGTAGATGGTCTCAAAGATTTGCTTGTTGAGCTCCCGTGCCTCGGGC 2731 Query 213270 GACGTGAAGGGCATCATCATGCGTT-GGAACACATCAGCCAGCCCCTGGACCCCGATGCC 213328 ||| |||||||| || ||| |||| |||| ||||||||||| || || | || Sbjct 2730 GACTCAAAGGGCATGCGCA-GCGCCAGGAAAGCATCTGCCAGCCCCTGCACACCCAAACC 2672 Query 213329 GATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTC 213388 || || | ||| | || ||| || | |||| || |||||| ||||| || Sbjct 2671 AATAGGACGGTGGCGCATGTTGCTGTTCTCGGCCTCCGGCACGGGGTAGTAGTTGACATC 2612 Query 213389 GATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATT 213448 ||||| ||| ||||||||| || | | || | | || | || | | Sbjct 2611 AATGATGCGGTTCAGGTTGCGGACAAGCAGCTGTGCAACCTCGTGGAGCTTCTTGAAGTC 2552 Query 213449 GAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAAC 213508 | || | | || | ||||| ||||| || | | || |||||||| || Sbjct 2551 GTACGTCTCGTTGTTGTAGTCAACAAAAGACGGCAGTGCTAGGGAAGCTAGGTTGCACAC 2492 Query 213509 GGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGAT 213568 || ||||| | | | ||||||||| ||||| ||||||| |||| || ||||| Sbjct 2491 AGCAACCTCATCCGGTGCACTGTACTCCACAATCTCCGTGCACAAGTTGGAGCTGCGGAT 2432 Query 213569 GGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAA-TCCTTGTAGAGCATGTAGG 213627 |||||| ||||||| ||||| ||| ||| | ||| ||||||||||||||| | | Sbjct 2431 GGTGCCTAGGTTCTTCTGGTTGCTCTT-GCGGTTACAGTGGTCCTTGTAGAGCATGAACG 2373 Query 213628 GGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCT-CCAGAGGTACCTGGCCTTGACC 213686 | || ||||| ||| | | | || | ||| | |||||| | | |||||||||| Sbjct 2372 GATTGCCCGTCTCCGTCTGAGCCTCGAGAA-CTGCGTACCAGAGCTTCTGGGCCTTGACC 2314 Query 213687 ACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGCTCGTTGAATTCGTG 213745 | | || || | | || |||||||| || || || | | || |||| Sbjct 2313 TTTTTGCGGCCA----CGACCTTCGCGCTCGTACTTCTCATACAGGGCCTCAAACTCGTC 2258 Query 213746 GCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCGT- 213804 ||| |||| |||| || ||||| ||| ||||| || |||| || |||| Sbjct 2257 GCCGTAGACGTCCGCCAGACCGGGACACTCGTTGGGGCACATCAGCGTCCACTCGCCGTT 2198 Query 213805 CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGG 213864 | |||| || | || ||||||||| || |||| ||| ||||| |||||| || | | Sbjct 2197 CTTCTCA-ACCCGCTTCATGAACAGATCAGGGATCCAGAGCGCCAGGAACAGATCGCGAG 2139 Query 213865 TCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGT 213924 | |||| ||| ||| |||||||||||| || || || ||||||| || || | Sbjct 2138 CACGAATCTCCTCCTTGCCATGGTTTTTGCGCAGGTCAAGGAACTCAAAGACATCAGCAT 2079 Query 213925 GCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCCTGGTCCACCA 213981 |||| ||||| | ||||||| || |||||||| | |||| |||||||||||||| Sbjct 2078 GCCAAGGCTCTAGGTAGATGCAGAAAGCGCCCGGGCGCTTGTTTCCGCCCTGGTCCACAT 2019 Query 213982 GCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGG 214041 | ||| ||||| ||| || || | || | | || |||||| ||||| | Sbjct 2018 AGCGAGCCGTGTTGTTGTAGACACGGAGCATAGGGATGATGCCATTGGACGTGCCGTTTG 1959 Query 214042 TTCCCGCTATATACGAGCCGGAGGCCC---TCAGGTTGCTCATGGAGAGCCCTATGCCAC 214098 | || || || || ||||||| |||| | ||| | | | ||| || ||||||| Sbjct 1958 TGCCGGCAATGTAGGAGCCGGTAGCCCGGATACGGTGG---ACGTTGAGGCCAATGCCAC 1902 Query 214099 CGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGT 214158 | || ||||||||||||||| ||| | | | || || ||| || | ||||||| Sbjct 1901 CAGCCGTCTTGGAGATCATGGCACAGGTCTTGAGGGTGTCATAGATACCCTCAATGCTGT 1842 Query 214159 CATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTG-GACGAGCCAGAGTTG 214217 |||| | | || || | ||||||| || | | ||||||| | | ||| | |||| Sbjct 1841 CATCCTTTATGTCCACAAGGAAGCAGGATGACA-TTTGGGCCTGTGGTGTGCCGGCGTTG 1783 Query 214218 AAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTC 214273 || || || || |||||| | | || ||||| || | | |||| ||||| Sbjct 1782 AAGAGTGTCGGCGAGGCATGCGTGAAGAATTTGTTCGACATGTAGTTGTATGTCTC 1727 >seq2400 Length=47555 Score = 145 bits (160), Expect = 1e-29 Identities = 347/521 (67%), Gaps = 19/521 (4%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | ||||| |||||||| ||||| || ||| ||||||||||| Sbjct 7938 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCCAGGGAGATGTTCTC 7879 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957 ||||||| ||||||||||| | |||||| | ||| ||| | |||| | Sbjct 7878 CATGAAGTCGAAGGGGTTGGTGGAACGGTACACCT-TATCATTGCCGAGGGCAACCAGAA 7820 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 || | || || ||| |||| ||||| | |||||| ||| ||||||||| | || | Sbjct 7819 GGCGGTCGGCAACGAACTCAATGTACTGCTTCATGAGTGTGGAGTTCATGCCGAGCAGAG 7760 Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077 ||| | |||| ||||| ||||||| ||| |||| || || || | | |||| Sbjct 7759 CGCAGGGAAGGGCCTCGGTGAGGAACTCCTGCTCAATCTTGACAGCATCGACGATTATCT 7700 Query 48078 GCTTAACGCGGGAC-TCTGAGGGTTTGTTGCGCAGGTGCTTGGCAT------AGAGCATG 48130 || || | ||| ||| || | ||| ||| || | |||| | Sbjct 7699 CCT------GGATCATCTCC----TTGCTGGGGCGGTTCTTCAGATGAGAGAACAGCAGG 7650 Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190 || || ||||| |||||| ||| ||||| || || ||| ||||||||||| || Sbjct 7649 CAAGCGAAGTCGGTGTGCAGGCCCTCGTCACGAGAAATAAGCTCGTTGGAGAAGGTCAGG 7590 Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250 |||||||| | || | || || |||||||| || | | ||| | || ||||||| Sbjct 7589 CCAGGCATCAGGCCGCGCTTCTTCAGCCAGAAGATGGAAGAGAAGGCACCGCTGAAGAAG 7530 Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310 ||||||||||| || || || ||| || | || | || | | | ||||||| Sbjct 7529 ATGCCCTCCACAGCGGCAAAAGCGACCAGGCGCTGAGCAAAGGTGGACTCGCGGTCTGAG 7470 Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 ||||| || ||||| || |||||||| |||||| || Sbjct 7469 ATCCACTTGAGAGCCCAATCGGCCTTCTTGCGGATGCAAGG 7429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931501512142080